XLOC_034520 (gene) - C. hemisphaerica

Overview
NameXLOC_034520
Unique NameXLOC_034520
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_245:142526..148071-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_034520 ID=XLOC_034520|Name=XLOC_034520|organism=Clytia hemisphaerica|type=gene|length=5546bp|location=Sequence derived from alignment at scaffold_245:142526..148071- (Clytia hemisphaerica)
AATCAAGTGTAGGCTTTGACAACCAACACTGTTATGTTAAACGTGGATTG AAAAGCAATCAAAAAAGATTGGATTAATTTTCAGTCGAGTGAAAAAAAAT GGATTAGTATAGTAAGTGTTTCATTTCGTCTTTATGTTTTTGCGGTACAT CATATCATTTGAGCTTTGTTTTGAACTCGTTGCAAGGGAACTGATTGATT AGCAAGTAAAAAGTTAGAGGGAAGTTTCATTCTTGAATTTCACTCAGAAA AACGACGGAAAAAGCACCGATTTCACTTTGCAGGCATCTTGAATCTAAAA AAGGACAATCTTTTAAATACGCAGAGGGGCGAAGGACAAAGAGATACGTT AAACCTAACAAACATTTATGAGATTTTTATGACTTTGTGAAAATATATTT TACTTTACTGATCATAAGTTTATTGTAACCATGGCAACACACGGGAGAAG ATGTAAGTATCTTTTACATGTCTGATATCCGCACAGGCTAATTTGGAGAA CGCACTGCGGCTATGGGATTGTATGGGTTTTTATGTTTGATTTGATAGAA AACAGGGATTGGGGGTTAAGTTAGTCACAAGTGATATTGCGTAGCACAGT TGCATGATATGACTAGGTAAACTAATTAAAATTCACAACTATATTTTATG TACACAAACACGAGAAAGTTCAGGTTGTTAAGTTGATGAGAATTTCTTTG CTTGCGAAATCGTTTGTGTAGTAAGGAAGTATACATACCAGATATTAGTT TGTAAGCATTGATTTACTAGTATTATATTCAACTAGCCCTACTAAACAAA ACTATGGTCACTCCAATAAAATGGCATTTCCTCTCTCTCTCTGAGAAAGA GACCGACGGGGTTTGCAGCTGTAATCTTTTAAAAATCTTCTTTTGAAATT TAGGAATAAGTCTCCTTTAAATGGATCTACTTTTCCTCAAAGTTCCTATA CTGTAATAGCATCTAGAATAGCACAAAATAGCATCACATCTCCGTATCCT GCTTGAACTAGCCTATACTAGACGTTACGGCTTTCTATTTTTCTACGCTG AAAAATCCCGGTTTTTGGTGAGGTGCTCGCTACCTAAGTACCCACTATTT CTATAAGTACTCCCATCAGGATTCCTTCTAACGGAAAAACTCAGAAACCG AATACATCAATATCTAGGTGGAACAGCAGTGATTTTTAACAATTTTCCTG CAATTCATCAAAAAGTAAATTATTTCAAATCAAAAGCTAAACGAAAATGG CAAAAACCTCACGGGGTCATCATAGAGGCTCATTGAGAATAAATCTAAAA CATCTATCCATATCGTGCCCTTCATAGTTTGAACAGGAAAACATGTAAAC AAATAAAATCCTTGATTGCAGTGGTAAGAAGTAAAATTTACACGTTTTTT TATAACAACAAACTATATAAGAACATTTTCATTTTGCTTTCAATGGCCAA AATATCAAGAACAAGTTAAGAAAATCTTAAGCCTTTGTAGACTCCAAAAC ACAAAAACACAAACACAAAAAGGAGAAAACAAGAACATATTAACCCTTTA ACCGCCGTTCGTATTTTTTAAGGTTCGACCTATTTGCCACGGAAAAAAAG AAGGTTCGACCTATTTGCCTATGTCGGCATATGCTGACATGGGAAAAAAG TAGCGATTTTGAGTTCATTTTCTGAATAATATATGAAGTATTAGCCAAGG ACTATAACTTTGAGTTGAACATTGTAGAATAGTTATTTTTCAACATAGAA AAGTTTGTAACTATTAATTTTTTATTCAAACCACCTAATACAAAAACCTT GTAAAAAATGATAAATTTTCGGCAAATAGGTCGAAATTTCGCATGTCGGC AAATCCCGACAATGACAAGGAAATCGAAAATGCTCATGTCGGCATATGCC GACATCGGCACGGAAATGGTTAAGAACATTTTTGGGCTTAAAACTCAAAA GCTAAGAACATCCGAAGACTTTTTGGATATTCTTATAAAAAAACCCGTGT AAATGAAAATCAGTAAAAACACCAAAAGCTCAGAGTCAAGAAATATTTTG GTTTTGCTATACCAGTTTAAGATATCAGACCAGAAGACTCAAGAAAGGAG ACAAAACTTCATAGGGGATTTGTACTTTTACGGTGTGACAGGATCGGCCC TTTTCTAGTACGATATTACGGGATTTTTTTCAATTTTCAGGATTCCGGGG TTCAGCAAAAACTTTAACGGGAAAACGGTATTTCGTACCCCCTACAACCT CCCCCCCTTCATACAGTGTATGTAGAAAGGGGATGAGTAGTTAGGTGTCG ATAAGTGGGTAAACATTAAAGGTTACACACAGGGGGTGGATGATCAAGTC TTTTTTGATTGGTAAAATACGTCATATTGTGTAAAAATAAATCACGGCAA TTCATTAAAGTATGAAATGAGATTACGTTTTGCTGTGATTACCCCTTGGC AAGAAAATAGATCACGAATTCTCATCTCCTGTGAAGTTACATGTTGAGAG AGGAATTATTTGTTTTTCTGATAGATTAAATATAAGTCAAGTTCGGTCAG GTGAAAATTATGATAATTAATTTGATTAAGGAATCATTAGGTAAGATTTA GTCTTAAATTTGATTTTGAAAGAATTATAGTACTATTTATGAGATATGAT TGGTTGGGTACGCAGAAAAAAAGTGATTCTTGTTGTTAATATTCATGGTT ATTCTTTCAGGCCGTGTACTGTATCCTATCTTTAAGATAATTGTATTGAA AGTAGCTTCGATTACGTTCAGATTTTGGTAGTCCGCAGACAAGTTTAGCG AAGATACTTTCTGGAAAAAGAGAGTACACATTTGATACAAGTGTTTTGAA TTCAAAGTCTTCTCCCTTGTTCATAGAACAAGAGAAACTTTCGAGTTGAA AAAGTTAGTTTTATATAGTTGGTTATTGATACATTTGAGTCAATATTTAA GAAAACTAAAAACACCAGAAAGTACACAGTTACTAGTCTATAAGTAAGTT CTCAGGTTGCTCTACTTTTTTATCTTTTGACTTGATTTTCTTGATTAACA GTAGTGATATTATTGTACTATTTTATCAATTTTGGTTTTTATAAAAAGGG AAGAGGGAAGGAATTAAAGTAGACTGGAGTCGTTCATAATGCATAGTATA GGCGTTATATGATAATATGATTATTGTTACGGGATTTAGCTGGTATAAAA TTTGTTCACTCCATTACTTTTTGCGTTATTTCTACTATGTCTGAATTAGT CGTCTAGCTTGCTAGACTAGAATTAAAGAGAGTTTCTGATCGATCGTCGG CCAAAGTACATTTTAGAGGGCAAAAAGTATTTTTGACTAAACTAAAAGTT TTTCTTGGTAACAACTATCTATTCTCAAACATTATCATAGAGGATATCTT ATATTATAAAATGATAAAAGGGTTTTTATTGAGGTGTAAATTTGCGCTTG TCGATTCAAAAATCTTAGAGATGAGGTAATCGCAAAACGAAATTTTGTTA CACAAAAATTAACACCATGCTATCAAGAATTTGAGCAAACTGCGTGAATA TTAACTAATAAGTTCCTATGGCGATCAACGAAACAACGGGAAAACTCAAC TAAGCTGGATGCTAATTTTCTAAATCAGTTTAATTCTTTATTGATATTTT TCTATTGATTTTTAGTATTGAATTGGAATCATGCCTGTAACACTTGTTAA GAGTTTTGAAGAACCGTCAGACGATACAGTAGAGAAAGAAGATCGAGATA AAAAGACGATGGGAAAAACGCTGTCTAAATGGATGTTCAAAAATGCTAAC AGTGTGGCAGATATGTCGGAAGACCGGGTCCAACAAGTACCCGGATCTTT AGGCTTAACCTTGTTCAATGTGATGGGATTGGTCAAATCCGGACACCTTT TCTACCGGAACAGACGAGATCGAAACAAATCGAATGTTTACAAGGTGTCT ATCTACCAGCCGAGAATCGTTTTATGTAGTTTTGATGGCATACGACAAAT GTACGAAAACACAGCCGTCCGAAAAGAACCAAGCTTCGGAATGTTTGTCT TCAACCAGGAAATCTTAGGAAATCACACACCTTTGATTTTCGAAAATGAC GAAATACACCATCAAAGACGTCACATTTTTATCGAACTGTCAAAGAAAAT ATTCTGTAACAAAAATTTCATCAACGAGCTTTCCCAAAGCATTAGTTCAG AATTAGACCACGTGATTGATACAATGACATCACAACCATCGTCTGATTTC GAAGATGCATTATCTGGCGCTGTTGGGAACGTCGTTACCAGATGCATTGT GGGAAAAACAATCGATAACGAACTCCTTAAGAAATGGATGGATAATTGCT TGATCAAGAAATTCAAGAAAGCAAGAGCAGAAGGGCCTTTGGTTTATGAG AAAATACGACAATCGGTAAAAGAAGGTCCGATTTTCCGTGAGTTTGCTGC AGGTTTAGTAAAAAAGAACGGCTTGTTGGAGGAAGATATATGCAACGAGA TCATCTTTGCTTTGATGTGAGTATTATTTATTGGCTTTAAAGATAGGATA GTGTCAAAATAAGCAATTACTCATATTGATATGTTTTTCATAATTCGCCT CAGGGAATTGAGACGAAGCAACCACCCAATCAATCAAGTTAAGTAATCTT CTTTAAAAAGGTCTGTGTTGCATTGATAGCACTTTCAAAAATTGTGTCTT CTAACTTATTCGTCGCATCGATTGCGATAAGGTGAAGGAATAAAGTAGCA AAATTGGGTATTATACATGGTTTTGATGATAAAACATTCTTATTTTTTTC TCTTCTAGTTTCAATGCTTATAAAGCATTACACGGGTTTGTCGTTTCCGC CCTTGTTCATTTATCCAACCTCTCTGAAGACAAACAGATCAAACTACAAA ACGATGCCTCAAACTTTCACCAAAGCACCGACAAAACAACAGAATTAAAT AGTGCAACTGATGTGGAGAATTATACACTTGAGATATTTCGCTTATTCCC GCCCGCTTCGTTTGTGTTCCGGAGAGTGACGGAGAACTTCGTACTTCCGT TAAAATCCGGTAACTATCAGGTCAACAAAGACGATCTCTTGTGTGGAAAC GTCTATTTGAGTCAAAGAGATCCCGATATCTTCGACAATCCAGATAAATT AGACCCTGACCGTTTCCAGCGACAACCACATCTCAAAGACTATTTAACAT GTTTTGGCGCTCCATTCTTACAAGACAGTGTGCCGAATATACATAAATGT GGAGGTCAAAAACTAGCCTTAACCTTTGCAAAGGTCTTTGTAATGCACCT TTTGACATTGAGAATTGAGTACGACGGACAACCTTCATGGTCCGGTAAGA AAATTAAGCGAATCATTGGTTCAGATAAACCAGTGAGAGTGAAAGCTATA CGGAAATGAATATAATGCATCTTAATAAGGCATACCTACGTTTGAGAGAT TGAAGATTGTATAAAGGGAACGAAAATTGAACGTACAACGGACACCAATT TCAGATTTGCAGGATTTGACACTTTTTGATTTAATTCGAAAAAAGA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00054799TCONS_00054799Clytia hemisphaericatranscript
TCONS_00054798TCONS_00054798Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00054799-proteinTCONS_00054799-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_245supercontigscaffold_245:142526..148071 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.15 0.17 0.37 0.58 8.83 5.28 24.9 26.94 23.89 55.46 18.89 40.46 4.6 3.25 0.17 0.18 8.9 11.04 9.24 10.12 9.6 8.37 6.48 5.96 7.7 8.68 183.31 155.38 2.21 2.06