XLOC_034773 (gene) - C. hemisphaerica

Overview
NameXLOC_034773
Unique NameXLOC_034773
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_251:224239..233577-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_034773 ID=XLOC_034773|Name=XLOC_034773|organism=Clytia hemisphaerica|type=gene|length=9339bp|location=Sequence derived from alignment at scaffold_251:224239..233577- (Clytia hemisphaerica)
AGGCAACTTCCAAGTGCCATCGTTTTATAACATTCACTGTTAGTTTTGTA
ATGTTTTCGAATTTGATATGGTTTGTTGCAGTTTTAATTTGTTGGAGTTT
TGTGGATTGGAAGGTCGATGCTCAGTTAGCTCCTGGAAAGTAAGTTTGAT
CGAAAATTTCTTAATAAACGCATGTAAAATTGTCAATTTCATAACTTTTT
TTGACTTTTTATTTTCATTAATTTCAAAAGGAGACAAAGTTACCCGCTAG
TTTTAGAAATGGTATGGTTTCATGCGCAAAAGAAATCAAAAAGTTTAATA
ATTCTTTCAGAGAAAGTTAGAGAAAGCTACTTTTTCAAACTCTTGAGTTT
GATTACAGCACCTGACCCCAAGAATGTAGTAAACCCCGAGAATGTAGCCT
TCTCATCTTTTAGCATTGTAGCCCTAACGATAGTTCAACTTCATAAAATA
TTTTTTCAGAGCATACTGTTGCTGTTACATATTACTTATTATCGGCGATC
CAAAAAATATCTGCAATCTGATTGGTTAAAAAGAGTACAATATATCTTGT
ATTTTACATGTAAAAATATAAATTGATGTTGTTGCTTTGTAGCGGTAGAA
GCAATCTAATGTCACTTTGCTACAAAAGAGTCCTCCAACACAAAAAGTGC
AATGTTTGGGTCACCGATAAACCAGTTATAAGACATTTGCTCGTACAATA
TGGAAATATTTCACTCGTTCCGGATTTTCCGTATATTTTCCGAGCCTAAT
ATTGTACCGAAAAATCTCGAAATCTCAGAACTCGTAAAATATTTCTCATA
TTGTACTCGCAACTGTCCGATAACTATTACTTATTTATAGACATTGAATT
TTAACTTGAATTTATTTTTTCCAAAGAAAATCTGAATCGAAGTTGATTGG
GTACTACCCGAATTGAGACATTTTTTGAATAAATCCTCTCTAAATCGAAA
TGTAGGTATTGGAAGATGTTATGATGATAGGGTGTTTTCTTACTCCTAAT
GAGCAATTTTCCTCATTCGTAATACGATAAAATTAATATCTTTGTTAGAT
TTTTGTCAGAGTATGGCAGAGTATATTTCTAAAGTTTGAATTTCATTTAG
AGAACAATAATTTCCGATGAAAACTGAAATTACGCTCCCAACAACCGAAT
TTTTTCACCTACATTCATTTTCAGAATAACGAAACGCTCTTTAGAATATC
GTTTTGGCACAAAATATTTCTAAAATTTGCTGTTATAATTAATCCAATTG
AAAAAATATGAACATTTTACTTTTACCAGATTTAAAGCCAAAAACCAAAC
CTATATTCTGGGGGTTATAACGAAAATGGGAGCCAACTTCAGGGACCAAA
TAAATTAGCCTATATATCAAAACCAATGAAACTAACCCCTGGGAAAGGAT
TTTGGGAGTTCAAAATTTCGTTGAAAACATTCAATATTTTTTGAAATGCA
AATCTACATCTTTCAGGTCTGATTCAAATTTCACCTACATTCTCGGGGTC
AGTTGCTGTAGTTGAAAATGATAATAAATATAAGTAGAATGCCTCAAGAA
TAGGTCGTGCTAATTGGGACGACTCGCAGCAAATTCGTACTCTCGCAGTT
CCAGCTCCTAAAGCCTGAAGGGCAGGCTCGGATACAGAGGGAGGCTATAA
CCAATGGAGGAGAGTGCACTTTATTATTGTATTACCTTATATGGAAACTA
ATTACTCTCCATGAATAAGACCTACCTCCTGTATCCGACCCTGAAGGGTG
AAGGATCGGATTCAATTTTTCGAACGGAGTTATGGAATTCGACGAAAATT
TCTTTTGTAAATTTGGTTCTCTGAAAATTGTGCAGTCTAGCAAAATGATA
GCGGAATTACGGAATCGGGCATCCCCTGAAGGTGAAAAATTTAATTGAAA
GCGGTGTTGAACCGTCTTGACTGCGTTGAAGGTTTTCAGTGCATTTTAGA
AAAGGGAAACTATTTCTATACCATTTTCTCAACATATTATTTTTAAAAAT
GATAAAAGAGAAATTTTTGAAACTGTCAGCACTGTCTTCATCTCCATGTC
TTTAGAAATACACGCTCAAAAATTCGGTCAATGTACGTACAATGAAAACA
CAGGCTTTTTTTCGGCGATTTCCTGGTCTTGATAAATGCTGAAACACAAT
ATTCTTCTAAAAAGCTCATATGATAACTTTAACTTAGCAAGGACTTTCTA
ATTTGACAAAAAGGCTTGCCATAAAGCTTTAAGAATGAACTTTCAGCACC
TTGCGGTTTAACATCATTACAATCAACTAATTATAACTCGACGACCATTT
AATTAATTTCTCTTTGGTGGCTGTTATCAATGCATGCCATTTTTACTAAC
TCAATTTTGAAGACCTTTAAAAAGTTATCTGGAAGGGAGGGTACTCATAA
AAACATGCCAAATACTATAAAAAGGTCCCCTAGCCAAAGAACAAAGTGAA
GTTGAATAAGTCATCTAAAAGGTAGATTGTGGAAAGATGAATTCTAAAAT
CTCTGTATTAGTGATCCGGTCAGTTCCGCCTTGGTGGAAATTATAACCAC
CGGTGGAATAGTGAGTAAACCCGTTCAAAATTACTTGAAATTTTCTACTC
CGATTAAAACAATGAAGTTTATGATCGTACAACCTGGTCAATAATCGTGT
TTGATTTGGTAGGTCAACCTGGTCAAAATCGAAAATCAAACCTTTATGAA
TTCTAGGAACAATTCTTGATAGTGAATTTTTTCCTTTTGCTCATATGTAT
AGATTTATTTTTTTCATAGCCGTCCTGATGAATTTCAAAACTTCACCGAG
CCACTGAGACAGGGGTGTAAGTTGGGAACCATTTAAGTCTCAATGGTGCT
GGACGAAATACACCCAATTCTCACAGACCCGCTAGGAGTTTTTCAGCCAG
TAGGGATAAAAATAACAATCTAAACAAGACGACTTAAAGTCGAAAATTTC
GCCTAAAGTTTTTAAACTGCATGGGAAAAAACAAGAAGTAGAGATGGAAG
CTAATCTGAAGTCTACTTTACATCGAGCCTTGATGAAACAAATTTATATG
AACAACGAGGCTCAAAATCGCTAAAAAGATAAGATCAATTTACGAACAAT
GGTTGTTTAATTCTTAAGAACTGATAACTGAAGGGCATATCACCAACTAT
AAAGAGTTATTAATTTGATTCTTATAGAGTATATGCTTATAATAAAAATA
CCTTATCAGGGAAAACTTCGTCGGGGAAAAGTGACGAAGTTTTGGCCGAG
TGAGGAATATTTTTCCCCGACAAAGTTTTCCCCGATAAGGTAAATATGTA
TGTTCATATTGTACGCGAGCCCTTGTTTACTTTGTAAGAACTAATTACCG
AAAGGTATATCACCGTCTATCGAGAGTTATTAATTAGATTCTTATAAAGT
ATATGCTTATAATAAAAATGCCTTATCAGGGAAAACTTCGTCGGGGAAAA
GTGACGAAGTTTTGGCCAAGTGACGAATATTTCTCCGCGACAAAGTTTTC
CCCGATAAGGTAAATATGTATGTTCATATTGCGCGCCATCCCTTGATTAC
TTTGTAAGAACTAATTACCGAAGGCTATATTACCTTCTATCGAGAGTTAT
TGATTTGATTCTTAAAAAGTATCTGCTTATAAGAAAAATAGATATGCTCA
TATTGCGCGTTATTCCTTGTTTACTTTGTAAGAACTTATTACCTAAGGGT
ATATCGCCGTCTATCAAGAGTTATTGATTTGATTCTTATAAAGTATATAC
TTATAAGAAAAATAAATATGCTCATATTGTGCGCCATCCCTTGTNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGTTTAC
TTTGTAAGAACTAATTACCGAAGGCTGTATCACCGTCTATCAAGAGTTAT
TGATTTGATTCTTATAAAGTATATGCTTATAAGAAAAATTAATATTCTCA
TATTGTGCGCCATCCTTTGTTTACTTTGTAAGAACTAATTACCGAAGGGT
ATATCACCGTTTATCAAGAGTTATCGATATGATACTTATTAAGTATATGC
TTATAAGAAAATAAAGAAAAAATCAAAACTGTGAAGCTAAAGACACAAAG
ATATATGACGTAATCCAAAGAAAACCCGCGAAAATGATCCGTGGTTATAC
GAGCGTGTAATTTGTAAATTGAATTTAGTGAGTTTGTCCACCGTATCGAG
TACTTTCGTTTTCTAATTTTTTTATTACACCGCCGCCGCGAAAGGCTATC
GTAATACTTTCGCTAAGCGAAATTAAAAATGGTTAGTCTAGTGAGAGAAA
TTATGTTCTGAAAACATCCTTCGTGTGCACAAACTTGTTAAAAGCAAACT
AACTTTTTTAAATGATCAATTAGGTCTATAAGATCACAAAAACAAGTGGT
GAGAAAAATTTTGACCATTTTGCTGGTCCCCATACATAGGACGTCATCAC
TTTTGCTGGGACTTGAAGATGAAAGTAAAAATTAGAAGCTCAAATATGGC
TCAAATGAAAGATATTTATCCAAAGATTCCAAATAATATCACAACATATA
CCGGGAAATCAATACTTGAGAAGCTATAAAGGAAAATAGTTCAAAAAATA
ACGTCATTAATGACGTCATCGGCAATTAAAAAATCATCGAAATCGAAAAA
ATTTTGTTTCATTTGAAAGATGATCAGCTTGGGAACAAAAAAATATTACT
ACGGAAAACCTTGCTACATTGTAGCTCTCACTAGGTGGGGAAATCATAAA
ATATTATTCCCGTAAGTTTTTGTCTGTGGATTTAAAATTCCATTGTTTTC
AAGTCAGAAAACTCGGTGGGGATGGGGAAAATAGCATAATATTTTGCAAA
GAGGATTGGTTTATTTGATTATTTTCAGTGGGGACGAAAACTGGAGGATG
ATTTTCCACTGGGGACGCTATTTTGGCCAATTTTTCCAGTGGGAAGAGCC
AGTGGGCCTGTGAGAAGGGAGTGTCGAAATAGGTGGCTTGTAAAATTGTA
AAGTAATGCATTCTCTTCATCCATGATTATTTTCAAATAAATTTCTATAT
TAGTTGTTGACATTCAGCACGATAAATATCGACCAAAAGTTTATCACAGC
TTGTATTTCCAAGAAGGCCCATGAAACCCATGGCTCAAGGAGGGATTCTG
TGTGAACACAATTACTTCCTTACCTTGAACGATACATTTTGATATTCGAT
ATTTTCTTCCTTACTTTATTAGCTATTGTTCAAGATTGTTTAGAGAATGC
TACTTCTTTTATGAAATTTGAGATTATCAAAACAAAGTGAAAATTTTTCC
TCAACGCAAAACAAAAAGATTATCATCCTAAAAAACCTACAAAAAATGCA
GGAATTGCATTTTCATGTTATCAAGTAAATACTCCGCCAGAAATCGCGAT
TCCTCCTGCAAATAAAAAACAAGATTTATAATAAATGTGACTAGAAATAA
TTGTTGTTATTTTTCCACTTTCTTAGAAAAAAACTTTTCTGGTAAGTGAG
GACAGTCATCCAAATTTCCAACTTTATCAAGCACGTCTTGTACACGTTTT
TTTTTTTATAAGAACAAACTATATAAGAACATAAGGCTTCGAGGCCCAAA
AATTTAAGAACATTCTAAGAACATTCTAAGGCTTTGGAGACTTANNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNAGAAATTACATCAAAATGCTCAAAA
AATGCTGAAAATAAGAACATTTTAAGAACATTTTTAGGCTTCAAATCCAA
AAAACTAAGAACATCCGAAGGCTTTGAAAACTTTTGACGTTCTTATAAAA
AAAAAACGTGTATACATCAAGTCATAAAAAATAAGCCATTTTTTAAGCCA
TTTTCAGTTTGATTTTAAAAGACATAACTTTTGGAACAGATTTTATCAGC
AACGTAACATTCGATGATTAACGCAGCAAAATGCATGTTTCCCTCATATT
TCATCGTCAAATCTTCATGTTGTTTGGAAAGTGATCGACGTTGAGTCAAT
TTATAAGTCTAGCATGAATTATATATATACTGACAAACTGCTTGAAATAA
TTCACCAATTGGGGCCCCATGACTGAAAGTCTTCACCAACACATACAAAA
TGCATGATAACTAATCTTGTTATAGAGCTAATGTTTGCGCTGCAACAATC
AAACAACTTTACTACGTATCTGTCCGAAAGTCGAGAATTGGCTATCAAAA
TTACGGGACATGTTGTAGAAGAATCTTTGGTCTTTGTTATGGCAGGTGCA
CTCGCTCAAGGTAATCACTATTTCCATATTCTCATAGGCCAAATGTTTGT
TCAGCTACCATTAAACTACGTATTATATTATGTGTCTGTCCGAAAATCGA
GGATTGGTTATCAAAATTATCGGACATGTTGCAAAAGGTTTTTGGGAGCA
GGTGAACTCGCTCGAGGTAAGTTTCTAATTTATATTTATATTATGAAATT
ACGGCGAGAGGAACCTTCACAAAATTACTTATAGATAGCACATAATATAT
GAAGTAAAAATTAACTTCAATGCATACTTTTACACCTTCACGTGTGTCTC
GTTTAAAACACATATATTTTTTCTTCCAGTCAAATTACAGTATATTACAC
CACTGCTGAAGTGCGATACAAACAGGGTTATCGATACTTCTGCTGCTCTG
GATGGGCGAGACAAGGTGATGGCTGTCCTACACGTGAGTTTTCTAAATCA
AGAATCCTCGCTGTTTTTTACCAAATCTTCGAAAAAACTCCCTGAGTATG
TATATATGTATCTTAAGGTATTTAATATGTTATAAGCTTATAGCGTTTGA
TATACAATGGAGTCTCGATAACTTAAACACTCACGGGCGGGGATTATAGA
TTTGTTCGCGTTGAGGAAATTTTGAGCTTTGGAGTAAGGTTTATAAGGCA
TTATTAATTGGGCTTTTCCAGAAAAAAACCATATACCCCCTGTTTCGGAG
GTCCATCCCTCTGTGGCTGGAAATGCTGTAACCCCCTGGAATTCCAGGCA
CTTTCAGGTTTAAACCCTCCGGAATTCTGAATTTTAGTAGGATTTAAAAA
GCTACCCCCAAGGAATTCCAGTTATTTTTGACAGATTTTTGTATCTCCCT
ATGGAATTCCACCACATATCAAACCTTACCCCTTGGAACGGAAATGGACC
TCCTCAACAGAGGGTATACGGTTTTTTTTCTGGAAAAGCCCATTGAAGGA
ACCATAAAACTAGTTCAAGTTAAGGAGGCATTCGAGTTAAAGAGGTTCGA
GCTAAAGATACTCCACTGTATTTGACTTTAAAGTTCGTGTCACGTGGAAA
CGAATCTCGGAATCTTAATTGGAATTATTGCGTAAGTTTTATCACACATA
AGACTTTTTAAGAAAGACAAATGAATGAGGAATCTTAGCTGTTTTATTCT
TCATTTTAGCCATTTGTAACCCTGGTTGTGTAAATGGACATTGTTCAAGA
CCTGGTGTTTGCACGTGTAAATCAGGCTATAATGGAAACAGATGCAAAAA
AGGTCGATAATTCCACTACTTTTTACATAAACTCTTTTATTCATTCTTGT
GCATCACCTATCAAATATTCAGAAATGATTTTCAAAACTTACGAATACCA
ACGCTATGTCTAATCGCGATAAATTTCCCATCCAATAATCTCTCTCACAA
GGAGATTTAGAAATTTTCGAAATTTGGTGAGACAGGGGTGTTAAAATTCG
GTGAGACAGGGGTGTTGAAGTTTGGTGAGACAGGGGTGTTTAAATTTGGC
GAAACAGGGGTGTTGAAATTGATGAGACAGGTTTATTTTGGAGAGTACGA
CAATTAACAGGCCAGAGCCATGCTATAATTTTATCATATAATTTTTCTTA
CAGATATTGATGAATGTTTGAGAAAACCTTGCGAACAAACTTGCAAAAAC
CTTCCTGGAACCTATGCATGTTCGTGTAGAGCAGGATATAAGAAAATCAA
CAATGATTCAAAATCTCGCCAGTGTGTCAGTAAGTCGTTTTTTTTTTTAA
ATGATTGTATGAATGTGTTAAGCTTTTTTTCATTTGACGCCATAGTGGCG
GTTGGTAGATAACACCCAGGGGCGGGGGTACTAGGGTTGGCGGATGAAGG
GTATGTGTGGACGGGACCTACAAAAACCGACCCTTAGAGAGACTTTTTTT
TTAATTTTCTTCGATTTTTGAAAATATTGGTACCAATTTCTTTTCTTGAA
ATCAAAAACATTTCCTAAAATCGTGAATTGTGAAAAAACCGACCCTTAGA
GAGAGTAATTTAAAGTTTTCTGAATTTTCCGACTCTTAGAGAGACTTTGA
AAGGTGAAAAAACCGACCCTTACCGTCTGCACATACCCAGCACCCATTTT
TGCCTAAGTACCACCCCCCATCACCAAGACCTTATTCCTTACTTTTCAAG
ATGTCGAAGAATGTTTGACAACACCATGCAAATGCGCTCAACCGAAGAAT
TGCAAAGCCACGTGTACTGATACCACAGGGAGCTTCAAATGTTCTTGTAA
CAAAGGATTTAAACTTGGAACTGACCAAAGAACTTGTGA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00055216TCONS_00055216Clytia hemisphaericatranscript
TCONS_00055215TCONS_00055215Clytia hemisphaericatranscript
TCONS_00055214TCONS_00055214Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00055215-proteinTCONS_00055215-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_251supercontigscaffold_251:224239..233577 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.07	0	0.08	0	1.82	1.14	0.69	1.07	1.4	2.22	1.74	0.51	7.2	7.18	3.37	4.56	0.96	1.51	4.41	9.14	1.08	1.63	0.75	0.91	9.71	5.49	1.21	0.75	2.56	2.68