XLOC_035389 (gene) - C. hemisphaerica

Overview
NameXLOC_035389
Unique NameXLOC_035389
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_269:294206..303150+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_035389 ID=XLOC_035389|Name=XLOC_035389|organism=Clytia hemisphaerica|type=gene|length=8945bp|location=Sequence derived from alignment at scaffold_269:294206..303150+ (Clytia hemisphaerica)
ACAAGAATTACTTTTGGAtgacgaaaatgaaaatttagatgGAGCTTCGT TCCAGGAGCACAGTGAGCACATGGTAAGCgaatttttttataggaacaac ttttaagaacaatgagactaaaaatgccaaaaataacAACAATAGATTGT ATcggatttctttatttttctaaaaaagcgttgtctggtgggattgtttc gggagtattacaaatagaattccctcgagtaATTCCTAAAAGatatttct attgtaatactcccaaaacaatcccacaaagcatcgtttttttagaaaaa tgaaaaactccgAAAAGATCTATTGTCAACGAACCCTTAGAGAAACCAAA CCTTACCGTCCTAATACCCAGCATCTATTTTTTACCCCCTCCCCCCAGGC CCAGTGTGGAAACAATGCAAAGTCCATGACGAATTGTTATTTGTTAAAAC TGAGGTCTACATCAAAAAGAGTTCCGCTTTGGCAGGCGAAATGTCAGGGG AGTGGGGTCTGGGTGGCGGTGTTAGTCTCCCAAATGGGTCCAGGGCTGAG CATTGGATGGGGTTCAGCGGGTAAACGCCCCGAAAGCCCTGGGATATTGG ATCTTCTCACACctaaaagttgctcaaaatttgCTATATTGTATAGTTTT ATAATTAATAAGGCTAGAAAAACAGCTTGTATTGCTGGTACATATAAGTT TGATGCGCTTAAACCTGGTGTAATAAAATCGGGCGTTACAATGGCAGCTC TCCTCTCGTCTCGGAAAGCTTTGACTTACGCCAATATCTTACTTTATATA TGCTCCTTACGCTAATACGCCAAATGCTATTACTGCCGGCGTACTGTGCA ACATTTCCAGGCTGGCCTCTGGCTTTATAGAGGCTGGAAATTCGTACTCT TAGTccctttcttttaattttctttctttagcaATGTGGAAGTGAAATGA GGAACTGCAAAGACGTCAAAGAGATTTGTCCACATTGCAAATCAGGAATT TATGAAATGGAAATTCTTGGTGAAAAAACGAAAGCCTTTTGTGACTTGAC TACAGACGGTGGTAAGATATTTTGAGTTAATCTTTCGTCCACCGAATGTG CCNCTACAGACGgcggtaaaatatttttgatttaatttttcgTCCAACGA ATGTGCCAGCCCATAGTGCTTAGTTCACTAATTTAAGCTATCCaaacaaa atttctattttttttgaagGCAACAAAACATATAAAAGAACGTCAAAACA CGAGATATTATTATAGAAAGATCAAAAGAAATGTCCAatgacaaaaaagt taaaagaaattttaaagaaatttttccatAAATCTTTTAATCAAACATTT TTATAGGCGGCTGGCTGCAAATAACGAATATCAAATTCGACGACGCAAGT AAAGTCAACTCAATATATACGAATCACATAGCTCAGCCATCGTCTATCGC TGACCTCCAAAATGCACCAAACTCGCAATTCATGTTGGACCCACTCGCCT TACAAAGCCTTTTCAATGACGAAGGTTACAGCGAGCTAAGAATCAAATGC TATAAATCATGGCACGGCAGAACCCTTGACGTCGTTCTATACGGTGAAAA GATACACAAATATGTAAATAGCGAAGCGTTCACCGTCGGAGGATGCGACG CAGTTCGGTTTTTACCAGGTGATAACTCATCAATGTTCCTGTCCCCTTGT GCTGATTACAGAATCGGAACAGGTGATTATTTGTTTTATCAATTCCCCCT TTGGATATGGGGAAACGGTCACGTGACTATTTTAAAATCTACCGCTCGGT ATGAATGCGATGACGTTAGCAGTGAGATTAACCATGACATTCAACAAAGA TATCTTGGTTATTGgtatttttatataagataaAAATTAGTCTCTTTTGA AAGACATTATTCTTTAAGGAACACAAAACACATCTATGAACCCCATACAC ATAGTGCATCTATGAACCCCATACACCAAGTGCATCTATGAACCCCATAC ACATAGTGCATCTATGAACCCCATACACCAAGTGCATCTATGAACCCCAT ACACCAAGTGCATCTATGAACCCCATACATCAAGTGCATCTATGAACCCC ATACACCAAATGCATCTATGAACCCCATACACCAAGTGCATCTATGAACC CCGTACACCAAATGCATCTATCAATACCATACACCAAGTGCATCTATGAA CCCCATACACCAAATGCATCTATGAACCCCATACACCAAGTGCATCTATG AACCCCGTACACCAAATGCATCTATCAATACCATACACCAAGTGCATCTA TGAACCCCATACACCAAATGCATCTATGAACCCCATACACCAAGTGCATC TATGAACCCCGTACACCAAATGCATCTATCAATACCATACACCAAGTGCA TCTATGAACCCCATACACCAAATGCATCTATGAACCCCATACACCAAATG CATCTATGAACCCCATACACCAAATGCATCTATCAATACCATACACCAAG TGCATCTATGAACCCCATACACCGAGTGCATCTATAAATCCCATACACCG AGTGCATCTATAAACCCCATACACCGAGTACATCTATAAACCCCATACAC CGAGTGCATCTATAAACCCAATACACCGAGTGCATCTATAAACCCAATAC ACCGAGTGCATCTATAAACCCCATACACCAAGTGCATCTCTCAACCCCAT ACACCGAAAGCATCTATCAACCCCATGAACCAAGTGCATTTATGAACCCT ATACACCAAGTGCATCTATGAACCCATACACCAAGTGCATCTATCAACCC ATACACCAAGTGTATCTATAAACCCCGTAAACCAAGTGCATCTATGAACC CCATACACCAAGTGCATCTATGAACCCCATAAACCAAGTGCATCTATCAA CCCCATTCCCAAGTGCATCTATGAACCCCATCAACCAAGTGCATCTATGA ACCCCATAAACCAAGTGCATCTATGAACCCCATACACCAAGTGCATCTAT GAACCCCATACACCAAGTGCATCTATGAACCCCATAAACCAAGTGCATCT ATGAACCCCATACACCAAGTGCATCTCTCAACCCCATACACCGAAAGCAT CTATCAACCCCATGAACCAAGTGCATTTATGAACCCTATACACCAAGTGC ATCTATGAACCCATACACCAAGTGCATCTATCAACCCATACACCAAGTGT ATCTATAAACCCCGTAAACCAAGTGCATCTATGAACCCCATACACCAAGT GCATCTATGAACCCCATAAACCAAGTGCATCTATCAACCCCATACACCAA GTGCATCTATGAACCCCATAAACCAAGTGCATCTATGAACCCCATACACC AAGTGCATCTATGAACCCCATACACCAAGTGCATCTATAAACTCCATAAA CCAAGTGCATCTATGAACCCCATACACCAAGAGCATCTCTCAACCCCATA CACCAAGAGCATCTCTCAACCCCATACACCGAAAGCATCTATCAACCCCA TGAACCAAGTGCATTTATGAACCCTATACACCAAGTGCATCTATTAACGC CAAGTGCATTTTAAAAGGGTTTGGGTTCGAGTAAACATTGGTTGAATGAC GTCATATACCTGAAGTCGCTGCATTGACTGATCGCATTGTGATGCCATCT AACCTCGTGTAAAGTCGAACTTCAACACCATTTAGCGAAAGGGTGTATCT ATCTGATTATGCGTTTGTATGTTTTTTTGATATATTTGAGgatttacttt tgactttttccccattttgtatgtattttgatgaacttgtgTAAATAAGT GTACGTAggtgtgtttatcaaaaaaaaaaattgcaatttattgtttctcc actattacttttcttcaatcaccttcatttggattaggtttttatTTCAC ATACCAATGTTTaagtttttgctaaatttcattcatgattcttctttttt tttaaaaattttacattgGCACAAACCAATCCAGCCTTTCATATAATATT CCAAAAATGGTATGTTAGAAAAGTTGGACCGATTTTCCCTAGCCCTttta agaacacgaggcttcaATGAGCTTCTTAAGAAATGGCACGACAATAATCA CAAAGTGGTGAAATGAGGTTGCAACGAGGTGAAGAAAATAGACTAAAACT TTTTTGAACACTTTCGACGTTAAACAAGCACGTTAAATACATTTTAATAT TTGTGATTTCGGTTCCCCTTCAATGGGAAGTGTCATGAATAACCTCTTGT TTAACAACAAGACGACATTTCGTCTCGTTTTTGCTCAGCGTCACCGGAAA GTTTGCAGTCTCaaacctttttttgaaaagggtTAATTGTAAAAGGGTTA ATTGTAGACTATGCTAAAGTCTAAGACGAATTCGAATAATAAAGAATAAC CTCAAACACGCAAATTAGCAGTCGAATAGAAATTTTGTCTGTGCGGGCAA AAAATAGTCGGAGGGGCTCAATGTACAGTCTCTATTTTCCGCCACGCAAC ATAATaacttttataatatacaactaTGCTATATCgtaatatcataataa tatattacatGATGCTATCGCATCGTCTAGGTTAAATAATAACATAGTCA GTtgtcccagggggggggggggtttNctcaaaaaaattttgctccccgta tggagactcaactgtatttattttttactgGCAGCTCTAACTCCATCTTT TAAGAATTCTTTCTTCCATCCCCgcggggtactagggttggcgaatgagg ggtatgtgcggacgggacctccgaaaaccgacccttggagagactgattt ttgctgaaaaggtgacccttagagagactttctgaattttttttttcgat ttttgaaaaaagtcatacccttagagagactttattacaattttttctct ggaaatcaaaaaatttcctaaacatcctgaattttccaacccttagagag actaatttaaaactttctgatttttccgacccttagagagactttaaaag gtgaaaaaaccgaccgttaccgtccgcacatacccatcatccatttttgc ctaagtaccccccccccggtcAGTTGTCCAAACAAGATTTTCGTCTTAAA CAGAAAgtggattttacacagcaaattagcacataggctgcgtttagacc aactggcatttgtaatttggcatttgctcatgagggattcgattttaata gctttccCATTGTATTTtttgtcatggcatttaaggaatcgtctttttag agtcattactgaaaagttgattccctcaagttcaactttgacagatcaaa caatgaaaagcatggaatttctcaaaaactgcagtcattgagactgaaac tttttgccgtagggctaggctatggcaaatcttgcaatttttacaatcta tagaaagaactgaataaaaaacgtgcaaatactttaaaaaatcaaaaatg tcattttttctctttgtttttgttcctttgtttgatttgaaatgccagaa aaggggattcctttgctcaaaatggcatttcaaatgccaacgaaatgcca acacgctggcatcattaggcatttgataAACCGAACAATTGTGCGGaaaa atagaattcaaaagaatactgcaagcaattacaaatgccaggctggtcta aacgcagccatatTCTTGAAGTTTTGGTAATACCATACATAGAGATATCA TTTAATAAAGAGAAATCTTTCCTAAGCTGTGTCGTCATCCAttcattttt cctttgttaaaagCAATTAGtggtcgtaaaaacagtttctcaaaatctga tgcGTGGAAAAAGATTTCATGAAAAGGATACGTTTACACTGTAGTTTTCT CCAAATCaacagattttaatttttgaaaaccattgatatttttcgatgta CTTTACCTTTTGTTTAGAAATTTTGGGAACTAAATTTTTgtagtttcatt tttcttcatctCAAAATTTGAAGCGTGAATAGAAATCTAATCAGAAGAAA TAACTAATTTCGTTGAAATTTCTatgaataaaaatttctaattaaaagtg cgttttcaaatagtttttaaGATAGGTAAATATATAAATCGTGCtgaatt caaaaatatattttttatttcgattaaAAGGACCGAAGTGCCCTAAATTT CCGCTCCAAAATCTTCTTATTATGTAAATAATTTTCTAGAATTGAAAAGA ATTCAATCAGTCTtgagaaaatatgcaattaaaatacgatcaaaaaaaaa gaattcaattACTACTTCGCACGTTCAAAAGAAATCCCATTGGCACTAAG GGACCCCTCACAGGCGCGCTTCATTTTGAGGATAAACGTTTGATAACTCT CTATTAATTCATATTTCTATGgtattaggcgagaccaatttgattagttt tttacgggcccgaccgaccctgatattccaaaaatcaaaatcaaaataaa attaattttggtagtacattttctaaaatttggtagtttttccaaggtta tGAGAATttcatgttcaatttttcaatttatccatgaattcgaccattgt gtgtctttttattttctatttcgcattttcgCCAACAGGAAgtagttttt tacttttaagttcattttttcaccgaccgaccgaccctcttttttggatA GCTAAATTGGCCTCGTCTTATGCAGAATTTGGATataatgtttttttgat ttgaatcgAGTTTTAACAGTTTTGTAAGCCCCATGGcaatttattcaaaa ttgatTGAAGTAAGATTTTTTGCGTGAATCggttaaaaatgttttaattt ttttatttgaaaaaatgaggcgaaaaattaataataaataaagTCGATTA TAGattattcaaaataaagaataaaatatCCATGAATACTATTTATGTAT TTTATTGAGTAATTTATTTTAAGGGTGAAAATATTCGGTGTATCTTATCT TTCTTGATTTCGCTGATGAATTGTTCGCaaaataaaatatctaaatGATG GATGACTGatagattgactttgatttctcATCTATTGAAACATGACTCTG CATTTGGCAGTATTTCTGACACAagtaattttcaaatgataagaAAAGCT GGATGGTTTTCGGTTCCAAAATTGATAGAACCGATATTTAACATCTAGAC AGTTTTTTCACTATTTCCATGGGTTCCAAGGTCAGCTATCCATAAACTGA AGGCAACATAGGAAGAAGCGGTGATTACAACCAGTTTTAGGCGCTGACAC CTTTAGGCTACCTGGCCACCGCTCCTTAGAGTTCAAATATAATTATGCAT TTGGCAGTTTTTTTGACACAAGTAATTGTTATCTATGCGCAATGGTACGA AAAAGATCTAACCAACCAACCAACAACAACAAGTATTGATACAAAGGATG CTTCAAAACCTGTCCCAGCAAGATCACCTATCGAGTGTGTTTTGAAATGC AAGAGAAATCTCCAAGAAAGTTATTTCGTTGAAGAGAAACAACTTtgttt ttgctttcaaagtaaAGAACAAGATTTATTTCCggatgatgaaaatgaaa atttagatgGAGCTTCGTTCCAGGAGCACAAGGAGCACATGGTAAGCAAA ATTTTGTATAGGAGCAACTTTTAAGAACAACGAgactcaaaaatgccaaa aattgcaaaaatagatcttatcggagtttttcaTTTCTCTGAAAAAGCGT tccattgtgggattgtttcgggagtattacaatagaattccctcgaggaa ttcctaagagatttctattgtaatattcccgaaacaatcccacaatgcat cgcttttttagaaaaattagaaactccgataagatctattgtcaacggac ccttagagagaccaaagcTTACCGTCATAATACCCATCATCTATTTTTGC CAGAGTACCCCCTCCCCTCGGTCTCGGGCTTGATAGAGGCAGGAAATTGC TGCTCTCAGTCCcctggttttaattttttttctttagcaATGTGGAAGTG AAATGAAGAACTGCAAAGACGTCAAAGAGATTTGTCCATATTGCAAATCA GCAATTTATGAAATGGAAATTCTTGGTGAAAAAACGAAAGCCTTTTGTGA CTTGACTACAGACAGTGGTAAGATATTTTCGATTTAATTTTTCGTCCAAC GAATGTGCCAGCCCATAGTGCTTAGTTCACTAATTTAAGCTATCCAAACA AAATATTTGGAAGGTAACAAAATATATAATAGGTCATTCATTCGATCAAA ACACAAGCCCCTAAAAATGTCGAATCGCAAAAGgttaaagtttttgtttt tacataagtgttcccgtttcatatcagacacatatatctcatatcagggc agtgtctgccttttgttatattatgccgatataagcaaaaaaaaattttc ccctcccctttctgaccaatcttactCCACATCCTTGTCAATCTAATgtg aaaaaacttgtaaattaaaattgatgagtaagcaaccgatatcactctta tttaaaaacaaaaactttaaaagaaatgttaagattttttaatcgaacat ttttatagGCGGTTGGCTGCAAATAACAAATATCAAATTCGACGACGCAA ACAAAATCGATTCAATCTATACAAATCACATAGCTCAGCCATCGTCTATC ACTGACCTCCAAAATGCACCAAACTCGCAATTCATGTTGGACCCACTTGC CTTACAAAGCCTTTTCAATGACGAAGGTTACAGCGAGCTAAGAATCAAAT GCTATAAACCATGGCACGGCAGAACCCTTGACGTCGTTCTATACGGTGAA AAGATACACAAATATGTAAATAGCGAAGCGCGGACCCTCGGTGGATGCGA AGCAGTTCGATTTTTACCAGATGATAACTCATCATTATCCTATGTCTCTT GTGCTGATTACAGAATCGGATCAGGTGAATATTTGTTTTATCAAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00056203TCONS_00056203Clytia hemisphaericatranscript
TCONS_00056204TCONS_00056204Clytia hemisphaericatranscript
TCONS_00056205TCONS_00056205Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00056203-proteinTCONS_00056203-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_269supercontigscaffold_269:294206..303150 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0.11 0 0 0 0.1 0 0 0.57 0 0 12.81 8.54 2.41 2.29 0.72 0.32 18.46 15.9 1.11 0.51 1.81 2.36 0.1 1.52 0.18 0.27 0 0.09