XLOC_035393 (gene) - C. hemisphaerica

Overview
NameXLOC_035393
Unique NameXLOC_035393
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_269:280126..283559-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_035393 ID=XLOC_035393|Name=XLOC_035393|organism=Clytia hemisphaerica|type=gene|length=3434bp|location=Sequence derived from alignment at scaffold_269:280126..283559- (Clytia hemisphaerica)
TTAGAAACATAACTAAATTAACAATATTTTACTTGCCGCTGAAAACATGA
AAATATATTTTTTTCAAAATGTAATTTTCAGAAATGGATCATTGTGAAAT
TTTTGTTTTGTATTTCTTTGTATTTTTGAATCTAACAAATGCCCTTCAAA
TGAACAGTTGCAGCAAGGATGATTTCTACCTACGCAAAAATGTTGGGCGA
AATGTCATCTTTCCTGGAGAGATTATTGATGTTGAAAATGTGAGAACATA
TCAACAATGCTTCGGATATTGTCAAAGATATGCATGTTCTTTATTCAATT
TTGAAGAAGTTGCCGCTGGAAATTTTAAATGCGGTGTTTATCCAGGACCA
GAATTCATATCACGGTATTCGCCGAAAACTCGCTTTGGAATAGAACCGGT
TCATCGATTTTTCTTCGAGAAAGTACCATGCCAGACAGATGAAAGTTCTG
AATATTCATTCAAAGGGACTTTTCTTGAAGCAGAGAATTGTAAAGAAGTT
CAAGAAAATGGCGGTGGTGAAACAGGTAAAATAATAAGCTACTTTATGGA
ATAAGATTTCGTGGATTTGGGTATCATACGCCAAATCTGAAGGCTCTAAA
CTAATTAGAAAAAAAATGCCAAAGACTGTCCAAGGTCCAAGGGTCGCTTC
AGGTATTTAAAACAAAAACTGCGATCGGAATTGTAACTCCCAACCAAGGG
GTATAGTCTTCGGCTTTCCCTCTCCTTCAATCGATGTCTATGTAACTTGA
ATAATTACTAGTCCGCCTTAGAAAAATTGATTTAGGCTGATTTAGGAATC
AACTAACGGACTCGTATAGCCTAGTAAACTGAGCCCGTATTCACAAGGCT
AGGACACCCGGCTTATATGTCTATATAGCATTTTCGGCGCTTTAAAGATT
TTTTCATGTTTACAGATTTTAAATTTGCCTTGGAATACTGTTATTCAGTC
ACAAACTTACCATCACAGATTTATCCTGAATCAAACTAGCTTAGATTTCT
TGGCTAGGACTCATGCTCCTTTATAGAGGTCTGCGATTCAGGCAATCATT
TTTATATTATAGGTATATATGAAGTTCGAGTGATTGGTCAACCTGGTCAA
TCCAGATACATTGTTTGTAACATGGATCTTATGGACGGTGGCTGGACGTT
GTTTCAACGTAATTACGGTCCATCGCACATTAACTTTGGGAAAAGATGGG
CAGATTACAAATCAGGTTTTGGTGATCTCAGATATCCATTTTGGGCAGGT
AATGCAATGTTTTGCTGTATGATTAGATTTTCAGCCAGTTATTCAGAAAC
TCAAATAAAATTCAGATTTTTAAATCGCGTCCGTCCCAAAAAAAATATGC
AGACTTTTAACCTTTTCAAAAATTTCGTAAATGAAGATATGGTGAAGATT
ATTAAAAATGATTTAGTTGATTAAAAAACTTGAATTTATACTTTCCTAAG
TCCTTGACTTCGCTGTTTTTTAGAACTTTTTAACTCTTCTGATCAAAGAA
GGCTAAATTTTGACACCATTTTATGAATATTGTTTTTCAATGTATTAAAC
TGTATACACCCCCTTCTCACAGACCCACTGGAAAAATTGACCAAAATATC
GTCCCCGGTGGAAAATTACCTTCCATTTTTGTCCCCACTGAAAATAATCA
TATAAACCAATCCTCACTGCAAAATGTAATTCTCTTTTCCCATTCCCACT
GAATTTTCTGACTTGAAAACAAGAAATGAAATCGCCAGCCATAAAGAAAA
TGGAAATATCAGTCCGTTGTTTTTATCCCCACTGGCTGAAAAAAATCCTA
TCGGGTCTTTGAGAAAGGGGTGTGTATATGTATCATTTTTGTTTGGAATT
TAGCTTTACGTAATCGAAAAAATCTTTTGCTTGCTTTTCTATGTGGAATT
CTACGTCGATTGGTGAATTATTTGAGAGCGTTTGGAGAATCTTCAACCTC
TGATTATCAAACTTTCGTTGAAACTTTTTTCAATTTATGAAGAGGGCTCG
CCAGCCAACGTAGATTAACTTTCGCGTGAAATACTTAGTGGATTAATTAT
GGCGATTTTCGCGAATTTTAGTCGTTTTTGCGCGAAAATTAGTCCTCGCG
AAATATTTAAAAATCCAAAATTAGCAAAAAACCCTAAGGAAATGGAAGAG
ATTGGGCGATAAAGAGGTAAATTTTGTCCACGCGAAAATTGTAGATTCTC
GATTCGCGAAAAAAATCCCACGCTAAAATTCCAACTGGCACACAACGTTG
TTTAAACATTAATCCTACGTTCACAGCGTCCATTTAACGTTAGATTAACG
TTGAAACAACGTTGTGTGCCAGCTGGGATGAATCCACTTTAGGTAAATCG
TTTTTTTTAGGGAATGATTTTCTTCATCAACTGACACAGAATGAAGACAC
CGAGTTATTGGTAGTCTTGAAAGATGCTGATGGTGATGATCATTACGCAT
ACTTCACCACGTTCTATATTGATGATGAAAATGAAAAATATCGATTGACA
ATCAGTGGTTATCAAGTTGTGTTAACTCCTGCTCTTCCTCAACAAACAGG
AGCTGAGCAGTTCATGTACCACAATCAAATGGTCTTTGTAACCTCTGATA
ATGCTCCACTCGGTATTGCTTGCGGCACCCAATATAACAATGGGTGGTGG
TATAATAATTGTTTTCGAGTTGCTCTAAATGGTGACCCGAATTTTGTTTT
GCCGACTGGTGGTACCAACACACCATTAGGTATCATGTGGCGTTTAGAGG
TCGGAGGAAATTGGATGATTTTCCGAGAATCAACGATGATGGTAAGAAAG
AAATGATGTTGTATGTTACATTGGAGTAAAAACTGTAAATGAACCGTAAA
AATACTACATTACATTGGCGAAACGGCAAGACGTCTAATCAGAAGAGTGG
ATGAAAACACGGGGAAAGACAATAATTCCCACCTAAACAAACACTCCCAA
ATAAAAGTACACAAACCCGTTTCGCTAGAAGATTTTAAAATTATTGGTAG
TCATTTTAAAAATCAAGAATATTTTAGAAAGATTGCAGAGGCTATTTATA
TTAAACGTTTTAAACCTACATTGTATGTACAGCATATGTCTATTCCTATT
GAACTTTTTAACTAATTTATAACTAGTCATAGCTTTCACTAAATGCCCAC
GCAGAAGATCATGTCATGCACTTATAAAGCTTTAAAGATTAAAGCATTAA
AAATAATCAGGAATAATGGGCTTTTCCAGTTAAAATCCGTACCCCCCACG
TTGAGGATATCCATTTTCAAAATTGTTAAACCCCGGGATGTCCAAGCCCT
ATTTTTCTCCAACCCCTTGGATTTCAAGGTTAAATTTTCCCCATCCTCTA
GGACGTCTCTTGTGAAAAGAAATAACAATACCCCCCTGGATGTCCTATAT
CCTCAACATGGATAGGGCCTTACCTCTCTTACTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00056211TCONS_00056211Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00056211-proteinTCONS_00056211-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_269supercontigscaffold_269:280126..283559 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.13	0.11	0.39	0.31	0.03	0.14	0.38	0.21	0.82	0.71	0.5	0.4	9.83	6.57	0.24	0.44	1.3	1.25	15.48	23.41	6.61	5.17	1.07	1.61	1.73	2.73	1.12	0.6	0.54	0.63