XLOC_035552 (gene) - C. hemisphaerica

Overview
NameXLOC_035552
Unique NameXLOC_035552
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_276:113877..118738+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_035552 ID=XLOC_035552|Name=XLOC_035552|organism=Clytia hemisphaerica|type=gene|length=4862bp|location=Sequence derived from alignment at scaffold_276:113877..118738+ (Clytia hemisphaerica)
ATTACCAAGTCCTATATTCACATCTAGGTAAGCCAATCTGCTCAATTTGA TAGCCCTATCGTAATGGAATGATACGAGTTTGTAAAACAGcaggttgttc ttattttgttttagGGTTTCGCCAAAATCGAGGCTCAAGGTCTTATATGG TCAATCTTATAAAAAGCGAAGAAGTAAAACTTCGCCCACCTCGAAAATTT CGTCCACCTTTGAAATCGCCCGCTAATTCGAAAGAGTTGCCTTGTTGTCA TGACAGTGGAGTGTTGTCGTTTTTACTGTTTGATACTTACCTAAGTTTAA AGGTCAAGAGGCTTCTCTTAGCAAATCGCTTTTCTGTCAATCACTCTTTT CAGGAGTTTTAACTAGTACAGACAAATTTTCTCCGTCAAATGTTGTGATT TCTCATTTCGCTCTCTGTCAGAAAAGTGTTACTGTTCTGGAGAATTTCTC CCAACCAGCTATCTGCACCGGAGTTTCAGAAAATCTACTCCAGATATTTC TAACGATATGTAATGTAAAGTATTTTGTCAGAGGGAGTACAcgttatttt ttaagaaatacacttttaagaaacatgaggctcagaatgcctaaaaacta agaagaaacatgctgaggctgagaatgagaaaataacatttttttaattc ggtttttaaAAAAACCTCCAATccaaacaaatgtttttttttctttgcat gaaaaataggctgattatgtcaaaaagtttagaaacgtgtaagaaacatt taaggctcaaaagaccgatttcttaagaaacattgaggctgcttggtaaa actagtttcttaaaaaaacgtgtacgaaGAAAGATGTAATCTTTTCCGTT CTGTTGTATCTTATGTCACAGAGGGCGGCTTGTTCAAAAACCTACATGGA AAAGGGGATTCGAATTTCACACATATTCTCTATGAAATTTTCCCCGAATA CATCTCGATTCTATCTATGACTTTAAATCTATGATTGCCCCTCAGGTCTT GAGTTCGGCTAGCAACTATATGAGGAACTAAATATTGCTCTGCATTTAGG GTTGTTATAGTTTTAGGCTATCATTTATAAGGTTAAGGTTACTAGCTCAT CATACCACAgccaaatttttcttataaaataagtGATGGGTTACATTTCG TATTGAACTAGGTGATAAAAATGCTGAAATTTAATACCTCCTTTTCACAT CACTTGATATAGTTTTTAgttcttttgaaaatgttacTTTTACATTATAT TTTGTTTAAACACTTGATAAATTCTTATGTTGCCTGGCGTCTAAGGGAAA TTGTAGTATTCTGGACTTCaatgattttaattaaaaaGGCAGGTTCTCAT TATTGTTTACCTTCCTtgctttgttaattttttataattttgactgGATT TCTAAAGGGCTACAAACactggcaatatattgaaaaggtgtccgcaatat attgtcagctcgatttgcaatattccaacaataaagggggattgtttaca aagataaaattcctttttataataaaatacCTGCAATTTACTTAGTACAT GACGGTCTGCAAACCATATTGTCAGATATTGttcatcaatatattgtgta gtcctTAACATTGATAGACTATTCGGATAATTGTTTGTATCAATTAAAAC ATTATGATATAATTCCAAAAGCCATAATTTCCTAcccccgaaaaaaaaaa ttNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGAGGGGGGTT TGGTTGGGGGTTTCAAAATTGTTAACCAAATAATTTTATCATCTATTTAT CCCAGGGCTCACGAGCTCGGTTAATAATTTATATATATAGAGTGGTTTTG TCTTTAGGGGGGGGGTTTGATTATATAGCGGGGGTTAAACCACCCAGGAA ACTATGATAGCACTTTGTAACATTTTACTGGGCAGGATTGAGTGTCATTT AAGATGTACACAAAACTGGTTAACCCCTGGATTGAAGGCTGCATATTTTG AGCAAAAGCTGTGCAAAAAGCGATAGGGTATCATTAGAGAGAAAAATGTA CTTCagcttaaaatatttgaaatatgtTTTGGCATTATAACTTaaagatt gggcttttccagaaatagtccgtgctcCCCCTGTAGAGGATATCGGATAT TCAGAGGggttaaagattttgtttaaaagtggatatccagggggattaaa tatctacaagggagcggatatccaaggggtaaagtgtcttttcaagtaaa gaatatataagagaggatatccaggggattaagcatatttttaagagtgg atatggTCTTATAAATAAAGTAGGATAGGGGGtttgatacttcgaaaaat caatatcctcaacagtgggggtaaaatctttttctggaaaagcccatttg tTTTGCATTGTTGTGACCAATTCGtccaaatatttttgtcaactcATTGG GCCAGATCATTATCATGTATTGAAACTCAAGACTTTGTTAAAGATCTGTT TTGTTGTAAACAAAAATCACCCTGGGAAACTAGAAACAAGTGTCATGTTA AAACATCACCAAAATGTACTTCAGACAgttttatttgtttatgttgCATA AAGTTTTTGTGAGATCACACTGCTTGAATTattataattttctttaaaaa aggttACCCAATCTcccttaaagtttgaaagcAATGAAATATTCAAACAA ATCATTAAAATGTTAAACTTTCAGGGATTTTGTtacattttaaaagaatt ttaagataaaatttcaaatgcaTAAATTAGCATAATTAAATGATTTAGCC AATCAATTTACTCCCTTTAAATGTTTCTTTCTTCCTAAAGAATTGTCACA AAAGCACCAAAAAGTGACAGTTTCTTTTCCATTGTTACTAAATAAAAACT GACAAAATAAATAATTCTCTATGGCAACCAGACTGTTTCTGGTAAACAAa atatttagaggattttatcgatctttcggtGAGGAAGGTTTTATTGGATT TAATTTACtcttttttggaatttgtgTTTTTAAGATCTTTTTAAATTCGG TTGAAATTGTAGGTAAGCAAAACGCAGATTTGTTGCttcaactctttttt tgcatttttattcAAGTATTTACAACAATAAGTTTCGTTTAACTAGGACA ATCTTGAgaatgtttttagaattttatctAAAATGTAAGTCAAAACCAAA TTTGGGTAACCCCCTTTGATAAAGTTCAAAAAGAGAActagaatttttga aataaggGCTTGAAGGTCAATAAGACATACGTCACAACTATATTGGGTTT TGCGGTGAAGATATTTGCTTTCCCCGGAGATTCTTCCTAACATTTAGTTT CAAAATTAAACTTACAATTTCATTTGTTCTACTGTTATAGCCCTCTTATT GAAGGGGATTGAAAATTTGCGTATAGGTCCTTCTATTAGAGGAAATAATG GAAGGAATTTCCTGAAAGAAGACTTTTGCATCGAGATCTGCATATTGCGA agagatacacgttttttacaagaacatccttatcgaatgttcttattttt ttgagtttcaaacctttaaatgttctcaacatgttcttattttcacaaat ttgtgagtatttcggtcaattttcataagaaatcgggtgtttcggagtcc ccaaagccttaaaatgtttttgctcTTAcgaagtttgttcttattaaaaa atgcgTATTCAATAAAAATTTAGTTTCGCGTATGAAACTTTAACTGCTAA ACTAAagattaatattttcatttttacagtCGTTATTACGTGTTACCGCC CACGACGCCCGAAGGATCACCCgaacccaatgacgtcacatcTTCTATCA TTGATGACACAGAAAGGTATTCccagtcttttgatttctttagaaaaaaa tactcCTGTATAACACAACTTCAGAATCATGAAATTTGTTGGCCCTATCA TCACAGTTTTCAGCACTTATGCCAGGACCTAGATGGATGGGGTTGTGAAC GACTTTACGTCAATTGCATAAGCTTACTCACATATACATAGTTAGACATT ATTCATCCGAAGTACAATCAAGCTTAGTACAACTGCTGCGTTAAGGTCCA TAACGAGAAAATTTCTTGAAGCGGCTTGAATGATGGAGAATTTTCAAGTA TCTAATacattatttcatttttagtattttactGACCAATGAAGAAGACC AACCACCCAAAAGACACATGAAGCAAATCAGTGTCGAACAAAAACTCTCT GACGAAGAGGGAGTCACTCCTTTAGAAACTTCTGACATCACAGAAGTCAG TGATGTGGAAGAAACCAAGGTTGTTACTATGGTGACCAAGGAAATGATAA ATGGTAGCAAAGATGTGGTTGtgacaaaatcttcaaatcctGAGAAGAGA GCTGGTAAAGAAGAGACTACGGTTATCGAAAAGACAATTATCCTTGAGCC GAAAGACCAGTCAAAGGAATCAGAAAATGAAGACAAAATAGAGACGAAAA TCCAGACAGAAACCTCTGTTACGTTAATTGATGAAGAATTCAAAACACAA GAAGGGGAGAATAATATGCTTTCCGAGAAGGAAGATGAAGAAATGAAACc aaataaagaaga
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00056413TCONS_00056413Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00056413-proteinTCONS_00056413-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_276supercontigscaffold_276:113877..118738 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.1 0 0.12 0 0.14 0 0 0 0 0 0 0.07 0.14 0.29 0 0 0.08 0 0 0.46 0.6 0 0 0.32 1.22 0.99 0 0 0 0