XLOC_038032 (gene) - C. hemisphaerica

Overview
NameXLOC_038032
Unique NameXLOC_038032
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_342:1266..7099-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_038032 ID=XLOC_038032|Name=XLOC_038032|organism=Clytia hemisphaerica|type=gene|length=5834bp|location=Sequence derived from alignment at scaffold_342:1266..7099- (Clytia hemisphaerica)
GGATTAACTTGTCACTGGCTTCACGTACAACAATAAATATAAGTAATTCT TCCGTGAAAGCTTTTGCAAGTGTGACCAGGAATTTTTGTTTTTATTCGTC TTTTTCACGTTTGGACTTGGACGCTTTTTGGTCAGAAATTTCCTTTCAAT ATGGCGACGAGCTTGCATTGAACTGGTGGCACTCAACATAAGGCTTTTGA ATGGACCTGCTGCCAATTTATTGGTCATGAAGGTGTTTCACTCACTATGC ACATCCTGAAGAAGTATTGAAAAAGGTAACTTGATAATTCTTTTTAACTT CTAGAGGTTTTCCCACATTCAAACTTGAGAATTATGCACTGTGGTGACTG TTGATTTGAGACCTCCTTGATCTCCCTTGTCCATGTGTAATGACTTTCAC TGCTGTATTGAGCTGACGGCAAGTTCTTATGTAGACTAGAGGTATGTCTG CTCCCAGGAGAGCCCTCTGCTTTATTTATCTGAAAAACAGCTGCATGTTC CTCAATCCATAATCATCAATGACTGAATGATGGATAGACATAATAATCGA TCATCCATCATGGATGACTAATCGAATCGATAACCAATTGATTGATTCGG GTAATTAATACGTAATTGATAACTGTTACCAATGGTAATGGATGACCAAT CGATTGATCTCGGATAATCGATAGGTTATCGCAGTATCGTACCTATTTAT TCTGAAATCTTGAGTATATATCTATCATGACCTTTGATTGTTTTTTTTCA TTCAGGCAATCAAGCCTACCTTGAAATTCAGATTATCGATTGTCTATCCA TTATTGGAATTAATCGATATACAATCAATTGGTCAACATGAATTAGAAAA AGTTACAGATTGTATTGATTGGGAGAGTCTGGTTTAACTTTAACTCTTTC TATTTGATAATCATGTTTTTTTTAAAGGAGGCTTGATTGCTTATCGATTG ATTCTATGACTATAAATTGGCTCTAACAAGATTAAAAAACAATGATCAAT CAATATATACAGTACTCAAGATTTTAGGCTTAATCAAATATATATATCAA TTATTGGGATTGGTTATCAACTAAATTGAATAGACCTTTTTTCAAAGAGG ATGTTCTGTTGAATAATTATGTAGTCCAGCCATAAAAACAATGATAGAGT CATGCATAATTACTGTATCATGCATATTGTAATAATTATGCATGGTTTTA NAATTATGTAGTCCAGCCATAAAAACAATGATAGAGTCATGCATAATTAC TGTATCATGCATACCGTAAGTTGGTCTAATGTCGACATCCGTCTTCTAAT TTCGACACCCTTCTTTAGAGATAGGAACAAATAGAAACTGAGGAAGGTCG GAATCGCTGATTGACTTTGATTAGCGCAATGAGAGGAAAAATCTTTAGTC TATCAGTGATTTCGACCTTCTTTTTATTCCTATCTATAAAGAAGGATGTC GAAATTAGAAGACGGATGTTGACATTAGACCAACTTACGGTATTGTAATA ATTATGCATGGTTTTATCATTGTTTTTCTGCTGGACTACATAATTATTCA ACAGGGTGGCCTCTTTGAAAAAAGGTCTATAGGACCAGACGGTACTATAC TGTTATCCAGTTACTTTTTCGAAGCGGGCTACACGGCTTTTTGCGCAATG CAATTGGTTCTTTTCGCATGACGACGGGCCTTCACTGTCCAGAGTTGCCC GTCGTTAGGAAAATTCATTGTGACGTCACTTTTTCAAAGGAAAATTAACA ATGCATTTACATCATTTCTCTCCTTTTTTATTTCTGACGTCAAGAAATTA TAACAATTTTTTATCTCTTTTTGCTTGTTTTTTTTCGCTTTATTTCGCTA TTGTTCCTGGATAAAGTGCTAAAAATCAATCGAAGCTGAAGGAAATGGTT AACAAATACAATAATGACCGGTTTCTTTCGGGCTGTACTGAAAATATTGT CCTCGGTCAACACAACAACCTCGCAAGCTCGGTCGTTACTTGACCTCAGG CAATATTTCTCAGTAGAGCCCTCACTAACCGGTCATTATTGTATTAATAA AATCAATAGCTAATCGATGATTAAAATATCGCTTAAAAACTTGCCTTGCA ATACAAGGGTGAATCACGGTACAGGTTCGAGCCCTGGTGGCTGCTATCAA AATCTCATCAACATTCTCCTGGGAAGATGATGAATCGATATAAGCCCATT ATAGTATTCTTTCTGAAATTAAGTGGTCCCCAAAATGTTTCTCAGGTGTA GAAAGCTAATTAACCAGGCTCATTTTATAGCATGGGCTTATAATGGAAAT CCCATGATAGAAGCCCATTATAGTATTATTTCTGTATTATATGTTAAATC TCACTCTAATTGTTGAAGCAATTTGTGGAAGTTTGACAATTCTGAGATAT TAAAAGCTTGAAATCTGATCAACCTTTTTTCAACAGAAAAACAACAATTT GATGAAGATGAAACAGAAAGTCTCTCAGAAGCCGAAAGTGAAGCAACACC ACCAAGATCAAAAAAACCTTATGGCAATCAAAGTAAGAATTCACTTTTCC TTTGTCTTTTCAATTGCTGAGTAGTTTATGTTTGTGACAATGACTACACA GTCAGTAACCCAAGATGGGTTTTATTAATAGCCTTACTGTACTTACAGAA TAAAATTTATGGTGTTTCATCTTTTTTTTCTCTTTTTACTGGGAGCTGAG AGTAGGTGTGGCGCTCCACCTCAGCATTCAATCTCCCAGGTCTAGCGCAA ATAGAAAAGGGTCTCCCTCACTCCCGGCTCCACCGACAGCCACCAGATGA AAAGAAATACTTTTTTAATACTTATCTTTTTAATAAAGAATAATAATTGT TAAAGTTTAAGAGAATAATGAACCAAGTTTAGTATTTTGAAAGAAAATGT CTTTATTTTTAGGTACCCCCGTTTCAGGAAAAAAGAAAGACCTTGACATG ACAATATCACCAATTATTAATGGTAAATAAAAAAGTTGCAGTTTTTGTTT AAAAAATCCTTAGTAACCCCCTTACTGCTACAGTAACCCTACAGTAGCCC CACAGTAGCATATGCAGATGGAAAGGCAAAAGTTAATTTCAAAATTATTT TATTCTATTTCCACTTGTTTTATTATTTTATTTAAAGTTTATACCAAAAA TGTTTTTCTTTTTTTAGATCATTCTGTCTTAATTCGTAAACTTATAAAGA AGCAAAAAGCTTTAGAAGAAAGGATTGATAAACTAGCTTCTCAAAACAAA AGAAGACCACCCACAATAGGCATAAGATCAACAACAAGTGTAAGAAAGGG GTTATTCTGACTTTGGGAAGCTGATATTGGTGCAAAGCAAGGCGAAATTT GTGCTTTTATCAAAATAAGACCATTTTAAGAATTTTAATTTTTTTACAAT TCAAAAATGCCAGCAACAACAAATTAATTCTCTTTGCAATCTGCCAAATT AGTTTCCACAGCCAAATTTTGTTTCCCTCAAAAAGTTCTTCCTGTCAAAT TTAGTTCCCCTATGAAATTTAGGGTAAAAGCTTTGTTTTCAGAATGAAGA CTTTCTACTCATGTAATCTGTAAGGTTTTCATCACACGGAAACTTAAGGG GATCTGCTTATTTTCTATTGATTATGAATTGAAAACTTGTCTTTTATCTT TTCCCTGCCTCTCCGTGAGCTTTCCATAACCTTCAAAGTCTCTAGTAATG TATCATTTTGAACGTTGTCTTTTCTTATAGAATTACATCAAGGTATGCTA CAGCAGGCTATGCGAAAGACACAATCATAAATGGAACTTTGATTATGGGT ATGATTATTCAGAAAATTGATCACCTTCGTAAAAATGATATAAGTAATAT TTTCTTTAAGATAAAGGGTGTATGCAGCAATATGTATTAAATAGACCTCT AAAGAAATTTTCTTTGGATTTTGGACAGAAAAATTGTTTTCATTTTTTTA AACTGTTCGGTCTTTCATTTGGGTATATACTTATTTCATTTATCATTTTG GTTTTCAGAGTGTGCTCCCAAGTTAATAAAGAAATCACAGAAAAACTTAA AGAGAACGTCATAGGGTTAGATAAAACCATAAGCAAAGACGAATTCAAAG GTAACTTTGTCAGTAGTTAAGTTAAATTTTTATTAGAGAAATCTTTTTAA GAGGGTTCTACACAATGCATTTCTTTTACTTGACCATTTTGCAGTCTTAT CTAGTTGGTGTTTCCAGCTCAAAAGCTAAAAATTAATTCCATCCTTTACA CTTTGGATCTAGAGGTTTTAACTTTGTCAGTGAACCAAAGGAATTCTCAT TTATTTTCTTTTTTTATTATTTTCCCAGTTCCCAAACTGCAACAGCAACA GCTGTCAAAGCCATTGAGGGTGGACCTTTAAAAGTTGTGGCTGACACTGC TTAATAAAACACAATCTGGAATTTTCATTTTTTTTATTTATTTCATTCAG CATGAGTTGAGACATATTTTAAATCTGTGAAGTTCTACACCCCAAAGTAA ACCGCATCTTATTTTCAAGAAAAGGCTTACAACCAACGCAAAATAACGGT AAAGATTTAAGATTTTCATTTGTCTATCACGTTGTCAGGATTTAATTATT TATTTAGTTATATATAATATAATACAATATTTTCACATGTTAAAATTGAA AATTTACTTAGATTCAATGATTTGTCCTGTTTCAATTCTACCTCCTTGTA GATCTGCTTTTAAAGTCAGCTTTTTATACCTTCAAAAATGAAGATGTAAA AATATTTTTTCTAAGGATCTGTAAATTTTCTTTAGCGTCAAATGAAAATT CAATCTTTCCTGATTCGAAAAAGTATTGAAGTATCTATGTGAAACTTTTT AGATCGGAAGATATAGCTGCTCAAAGTAGGCACACTTTCCCCGATTTTGG CCACATTCGAAGGCTTGTATCTTTCGATCCGAAAACGATTCGATTCGAAA AGCCACGAATATTGCGGAATATTGATTCATACTTTTTGAAATGCAAAAAT AAATTCAGTTTATTCATACAAAATTTCGAGTTTGTTGAACCAATAGAAAA GTTTTTCCTTTTTTTTCGTCTTCATTTTGCTTCTTCATTTTCGAAGATGA GGAGTCATTGAAGAAATTAGGAGAATTAGGTCTCCAATATAAGTAGTACA CACATATTTGGAAAAAACTTTAGATTGAAATTTTTTATTTACTTTTTAGA AACTCAAGAAACGGAAGTCGACTTTAGCAAAGGTAAAAACAATTGACCCT GACGATGTTTCAAAACTCAACGATGTCCTCAATATAGAATTTATGTCTTC AGAAGAAGAAAAGTCAGACTGCGAGGAAGATCATTTCGAAATAAGGCCAC TTCGCTGGCGGAGTGTGGAATGTGATGAAAAGTTCGACATGTTGNAAGGA ATATCATTTCGAAAAGAGGCCACTTCGCTGGCGGAGTGTGGAATGTGATT AAAAGTTCGACATGTTGAACAAGAAGGCATTTTCTTTGGTGTCAGCAAAA GCTCGCCAGCAAACTGTGGTTAGAAAAAATGGGACCATATAGTTCAAGGT CAGCGCCACAAAGTACCACCAAAAATAGCTGGGCTATAAGGCAAATATGA ACATTTTCCCATTATTTATTCTTTTGTTACCAGGGTGGTAGATTACACCC CCTGGTGTAAATAGGGTTAAGGGAAGAAATTTCCGATATTTCCGAAGATA TTTTCGCAAATTACAAATTTTTGAGAACTCGTGAAAATTTCTTGCACAAA AATACCTTCTCGCAAAATTTCTTCCCTTAGTAGTACGTTTGTTCCCCTTA AATTCAACATGTATATAATATTATTCCCCTTTTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00060468TCONS_00060468Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00060468-proteinTCONS_00060468-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_342supercontigscaffold_342:1266..7099 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.8 1.07 0.49 0.44 12.51 8.7 7.4 7.85 8.86 6.67 14.3 11.46 12.67 15.05 7.17 7.57 11.06 11.63 13.72 9.3 13.74 14.48 6.49 8.97 12.85 13.32 7.68 6.15 1.94 1.92