XLOC_038060 (gene) - C. hemisphaerica

Overview
NameXLOC_038060
Unique NameXLOC_038060
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_343:147260..153757-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_038060 ID=XLOC_038060|Name=XLOC_038060|organism=Clytia hemisphaerica|type=gene|length=6498bp|location=Sequence derived from alignment at scaffold_343:147260..153757- (Clytia hemisphaerica)
GGGGTTAGCCTGTACCAAACTCTTCGCATCCAAAAACCGATAATATAAAA AAAACCACCAATGGGATGGATGGTACAGGTTAGGCAGGAGTCGGTTAGGA AACACTGTATTTGAAGTGACTGTACACTTTCCGCGATCCCAAACATGGAA GATACGGAATTGAACTGAAATTGAGGTTGTGGGTCACCAACAGTCACCAA TTACCTTCTCATTTGCAATTGAAGATCCTTTCAGACGTTGCTTTGACGTC AATTGTTCTACCAATAAAGGAAACCTACAAAAACTCTGGTAAATTAATTC GCATGGTAAAGAAGAATGGAGTACGGAAACTGATCGTGCTGTTTATAAAG AGACACTTAGAAACACATTTTCTATCGAATTCCTCCGCAACTAACTTCGA TTTAAAGACATCTCTCTAATTAATTAGAAAGCAATCATGTTTTGACCACA GTATTGTGATGACATATTTGGTTTAATGATAAACAACGTAGCTCCTTTAC TCAATCAATGAATATAATACATAAATATAAAAGTTCTTCCAATATATTGT TGTTCAGACATTGAGTCGTCAACATCCAAGCGAGCGATAGAAACATTTTT GAAGAAGAATCACAGTTTGGAGTTATACAAATATGGTGAGCTCCTTGCTA TACTATTTCAATTTAAGGATGGAAACGAAGAAAGTAGATAATTTAATTTG ATTATTTTTGATAGTTTTAATTATATCGTAACATCTTCTTTTTGTGTTAT GTTCGTTTCTTGGTTCATAAGAATGGGCTCTTCCAGAAAAAGTCCGTTCA TGGGGGGTGGAGGATGAATTGTCCAGGGGTATTGAAAAAATACCAAAAAA TTGCAATTTCCAGGGGGTAAATTTTAATGTCCAGGGGTAATTTTTTGTGT CCACGGGGTTGGTTTGATGTTTGTCCAGGGGTATAACCCGTGTCCAGGGG TCAAAAATCAAAATGTCCAGGGGTAAATCATGAAAAAAATAATATATCCT CCACCCCCCATGAACGGATTTTTTCTGGAAGAGCCCAATTCTTGGAAAAA TAGTTACAGCAAAAAATTAGTTTTTGAAGTGGTAGTTCTTCCTTCCTATA TTTATAGTTATCGTTACCTATACTTTTAAGTGTAATATTACTTATGTCTT TTCTTCACATTTTCGTCCCACACAGCATCTTCACTTAGTCGTTTTCTTGA CACTCACAATATGTGCAATAACAATCCATAGTCAAAATGCAAATGCGAAT GCAAACGCTTGGAAGGTACGACCGAGTAACAGGCCTCGATGGTTTACGCG ACCCACAAGACCGACACGACCTGTTGTTACTTACACAGATTATGAAACAG CAACTTCTGCGTCAACACAACCGACTACAACTACGTCTCAACCAACAAAA CCAACACCCAAAACTGAAACTGCAGCTACAACGAGATCAACATCAGACAG ACCACAACCAACAACAACTAAACAAACAACAGCCACAACAAGTAAACAGA CAGCTTCAACCTATTCCACGTCACCAAAGACACCCATGACACCTCCACGA TCAACGAAAATGACAACAACTTTACGTTCTTCAATAACAGAAAACACTGA GCTAAAACCAACAACAAAACAAACACCCAATACAGAAATAACAACATCCT CGTCCAGGACGACTACAGCAGAACCTGCTACGAGGCAACCTACCACAACA CAGAAGACACGACCTGCAACAAGACAGACTCCTCAAACACCGATTTCTAC AACAAAATCGACAGTAAGACCAGCAACAGACAATACGAAAACAACAACAC AAGACCCCAACGTCACTAAAAACACTACTACAACAACTTCTGAAACAACA GAAGGGACTGGTCAATCAACACCTACAACAGATAAGTCATCCACAACCAC ATCAATCAGAACCATACCGACCGACGACAGTCTACCATTCACCATTTCAA AATTCATCAAATACAAGATCGGAAAACTCTCAGATCTTTATGGTCTTCCT TTTAAATCATTGACCGAAATCTTTGCAGCTCTGAACACGTACAATATCAA GAAAGTCATCAAGACAGGTGTCCGGTACCAAGCTTGTCCGAAATTATATG AAAAATCAGTTAAAACAGCTGCGGATAAATTACTGAAGACATTGAAACGA CAAATCAAACAATTTAAACGAAAAGATAACCAAGTTTGTTTTGGTAATCG AAATGGGAAATATGATTGCGATGAATGTTGTAAACCTTCAGTTAAGAAAA ACTTGAGTGGATTTTGTCAATTCTGTGTCTGTGTCAATGATGTTTCATTT AATGGTGAACAAATTTCTATAGCTTCAAGTAGCATCAAATCTTCCGAGAC TGAGAGTATTGTTACTGCAACAACTTCCCCAAAAGCTACCNCCAACAAAA CCAACACCCAAAACTGAAACTGCAGCTACAACGAGATCAACATCAGACAG ACCACAACCAACAACAACTAAACAAACAACAGCCACAACAAGTAAACAGA CAGCTTCAACCTATTCCACGTCACCAAAGACACCCATGACACCTCCACGA TCAACGAAAATGACAACAACTTTACGTTCTTCAATAACAGAAAACACTGA GCTAAAACCAACAACAAAACAAACACCCAATACAGAAATAACAACATCCT CGTCCAGGACGACTACAGCAGAACCTGCTACGAGGCAACCTACCACAACA CAGAAGACACGACCTGCAACAAGACAGACTCCTCAAACACCGATTTCTAC AACAAAATCGACAGTAAGACCAGCAACAGACAATACGAAAACAACAACAC AAGACCCCAACGTCACTAAAAACACTACTACAACAACTTCTGAAACAACA GAAGGGACTGGTCAATCAACACCTACAACAGATAAGTCATCCACAACCAC ATCAATCAGAACCATACCGACCGACGACAGTCTACCATTCACCATTTCAA AATTCATCAAATACAAGATCGGAAAACTCTCAGATCTTTATGGTCTTCCT TTTAAATCATTGACCGAAATCTTTGCAGCTCTGAACACGTACAATATCAA GAAAGTCATCAAGACAGGTGTCCGGTACCAAGCTTGTCCGAAATTATATG AAAAATCAGTTAAAACAGCTGCGGATAAATTACTGAAGACATTGAAACGA CAAATCAAACAATTTAAACGAAAAGATAATCAAGTATGTTTTGGTAATCG AAATGGGAAATATGATTGCGATGAATGTTGTAAACCTTCAGTTAAGAAAA ACGTGAGTGGGTTTTGTCAATTCTGTGTTTGTGTCAATGATGTTTCATTT ATTGGTGAGCAAATTTCTATAGCTTCAAGTAGCACCAAATCTTCCGAGAC TGAGAGTATTGTTACTGCAACAACTTCCTCAAAAGATACAGATGTTCATA CAACAACTAATACTCCAGCAAAAATGACCACACCTCAAACTTCAGATCAT TCTTCTCAAGAAGAGAACATCTCTGGTGAAAACTCGGCAACATTGATAGC ATCAGAAGCAGAATCAACTCCACATGCTTCAATTGGCAGTAACAATGAAC GTTACAGAAGACGACGTTCTACAAATGGTAAGAATTATGGTACTTTTTTA AATGAGTCTCATAACATTCATTACATCTAGATCGTACTTAAACGATACTC ATTAAATTGCAAAGAATACACGTTTTTTTTAAGAAACTAGTTTTACCAAG CAGCCTCAATGTTTCTTAAGAAATTGGCCTTTTGAGCCTTAAATGTTTCT TACATGTTTCTAAACATTTTGACATAATCAGCCTCATGGAAGGCTAGATT GGAAGGTTCTTAAAAAACTAAATTTAAAAAAATGTTATTTTCTCATTCTC AGCCTCAGCATGTTTCTTAGATGTTTCTTAGTTTTTAGGCATTCTGAGCC TCATGTTTCTTAAAAGTGTGTTTCTTAAAAAAAAAAACGTGTACTTTATA TCTTAAATACGCTATATGTTTTTTATTTCTTAAGCATAGGGTTCATTTGA GAAGAGGCTGGACAAAATGCTTAAAGATCTATTGTTATATCAGCTTATAA ACGTTTATGTTTATAGATATTAAAACGACTTCGGTGAACGTTGTTTTAAA ATCTCAGCGCATTTTTCATAGGGATGACGGCAGAAGAGCAAGCCGTTCTT GAAGAATTGAATCTTCACAACACATTGGGAGCACGTGCTACACTGAGAAC AAATTGTCTGGAGAGGGGGAGTGGGAACGACCGAAACACCATCAACATGT GTCGATCATGTCAATATGATATCAACTTACCCAGCGAGTAAGAGTTGTTT GCCTTTACTACTTTCTTATATGCAAGGTGTCTTTAAAGATCTCTGCAAAA TTGGTTTAAACAAAAGATTCTTCTGTTAAACCAGGTATTTTTTGAGAAAC TCTTTTACCAGTAGATTACTCCATCGTTGTTTAATTTCATCTTTTAATAC CAGTGGTCCCTGGGAGAGACAATGGTTCAGCTCCATGGAAGCTGAGTCAT TATTCCATGACCAGTCACTTAAAGGTTTTATCTTTACATAAGTGTTCCCG TTTCATATATTTCATATCATTACAATGTCTCCCTATTGTTATATTATGGT GATATAAGCAGAAAAGTGTTTTTCTTTTCCTCTTTCTGGCCAATGTTGCT CCACATCCGTGTCAATCCAATGTTAAAAAGCTTGCGAATTAAAATGAGTA AGCAAACGATATGACTCTTATTTAGAAACAAAACCTTTAAAATATTAGTG ATTTTACTTGACTCCCATCTCCCCTTGATCTCCCATTTTCTATCGATTCT TATTATTATAGTTTACTGAAATAGAATCTCCGATCCGCAACAGGAAAATT GCGAAGGAGTACAGTTGAGTCTCTTCATAACTCGAACACGCACGGGGAAC ACAAATTTGTTCGAGTTAAGGAAATTTCGTATTATGAAGTAAGGTTTATA AGTCATTGTTAACTGAAGGGACGAGAAAACTTGCTCGAATTGAGGAGACA TTCGAGTTATAGAGGTTCGAGTTAAAGAGACTCTTCTGCAGACTCTTCTT CTTTATATATTTTGTATACCATGTGTGCTCTGAAATTATTTTATGGATTG TTTCTCTATAAAAATAATTTTGACTTGTTACTTTCCATATTTTTTACTTT CACTTATTCTTTCTTTCAGTCATTACCCAGAATCCTTCATTCATACCACG TGCGGGAACGGTGAAGATATTTCATGTTTCACCAGTGAAGGTGTCTGCTC CAAAGTCATTGTCGTCAAACCTGTTTTGAAATGGAAAGATGATGGTGGCT ATCAAGAATTTCATGTTCCAGTAACAATCGGATGTGCTTGTGAAATTATC AAGGGAAGCATTATGGAGGTTTTTGTATAAATACGTCGATGCTGGAAAAT TTTGCCTTTGGAGGACGATAGCTTACAACGTAAGTGTAAGAAAACTGAAG GTGTGTGATTCCAAAAACAACGCCAGTCCTTACTAAATTACAGTACTTAC GAACTGAAACCTCCCATATGAGCATTTTAAACAATTTCGTGACAAATGTC TTTCTAAATGGAATGTGTACCGGAAAGATTTACTGAAAATTACCGGAATT TATTGAAGCAGCGAAAAATTAAAGCTGATATAGGGACGATACAAAACTAT CAAACATGAATTAAAATTGATCATCTAATTCCGCCATTATACACTCTATT TCATCGTATTTGGAATTTAGAAAAGACTTCTATGTTTTATTTGAACCATN AAAGTCATTGTCGTCAAACCTGTTTTGAAATGGAAAAATGATGGTGGCTA TCAAGAATTTCATGTTCCAGTAACAATCGGATGTGCTTGTGAAATTATCA AGGGAAGCATTATGGAGGTTTTTGTATAAATACGTCGATGCTGGAAAATT TTGCCTTTGGAGGACGATAGCTTACAACGTAAGTGTAAGAAAACTGAAGG TGTGTGATTCCAAAAACAACGCCAGTCCTTACTAAATTACAGTACTTACG AACTGAAACCTCCCATGTGAGCATTTTAAACAATTTCGTGACAAATGTCT TTCTAAATGGAATGTGTACCGGAAAGATTTACTGAAAATTACCGGAATTT ATTGAAGCAGCGAAAAATTAAAGCTGATATAGGGACGATACAAAACTATC AAACATGAATTAAAATTGATCATCTAATTCCGCCATTATACACTCTATTT CATCGTATTTGGAATTTAGAAAAGACTTCTATGTTTTATTTGAACCATCG ATTTAAATTGCCTTATTTAGAACCATAGGGATATGGTATTGGACTGACTC GAAAAAACGGAGTGATATTTCTTTTGCTTTGATAAAATTTTATTTTTAGA AATTGTATATTGATCTTCGAAATGTTTTTTTTCATTTGATCATTTTTTAA ATCTGTATATAGAAACAAAACAAGGATTGAATATATTATATTAGTATCTG TAATTCGAATATATAAAGTCTCAAATTAATTTCCAGATACTCTTAGCG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00060503TCONS_00060503Clytia hemisphaericatranscript
TCONS_00060502TCONS_00060502Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00060502-proteinTCONS_00060502-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_343supercontigscaffold_343:147260..153757 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.75 0.93 1.38 1.31 1.64 1.8 1.07 1.86 1.33 1.63 1.46 2.13 18.89 18.38 14.26 6.29 4.45 13.69 1.41 1.43 1.29 1.51 0.4 0.5 2.3 2.44 3.18 4.34 0.25 0.11