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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00060503 ID=TCONS_00060503|Name=TCONS_00060503|organism=Clytia hemisphaerica|type=transcript|length=1516bp
tgggctcttccagaaaaagtccgttcatggggggtggaggatgaattgtc
caggggtattgaaaaaataccaaaaaattgcaatttccagggggtaaatt
ttaatgtccaggggtaattttttgtgtccacggggttggtttgatgtttg
tccaggggtataacccgtgtccaggggtcaaaaatcaaaatgtccagggg
taaatcatgaaaaaaataatatatcctccaccccccatgaacggattttt
tctggaagagcccaattctTGGAAAAATAGTTACagcaaaaaattagttt
ttgaagTGGTAGTTCTTCCTTCCTATATTTATAGTTATCGTTACCTATAC
TTTTAAGTGTAATATTACTTATGTCTTTTCTTCACATTTTCGTCCCACAC
AGCATCTTCACTTAGTCGTTTTCTTGACACTCACAATATGTGCAATAACA
ATCCATAGTCAAAATGCAAATGCGAATGCAAACGCTTGGAAGGTACGACC
GAGTAACAGGCCTCGATGGTTTACGCGACCCACAAGACCGACACGACCTG
TTGTTACTTACACAGATTATGAAACAGCAACTTCTGCGTCAACACAACCG
ACTACAACTACGTCTCAACCAACAAAACCAACACCCAAAACTGAAACTGC
AGCTACAACGAGATCAACATCAGACAGACCACAACCAACAACAACTAAAC
AAACAACAGCCACAACAAGTAAACAGACAGCTTCAACCTATTCCACGTCA
CCAAAGACACCCATGACACCTCCACGATCAACGAAAATGACAACAACTTT
ACGTTCTTCAATAACAGAAAACACTGAGctaaaaccaacaacaaaacaaa
cacCCAATACAGAAATAACAACATCCTCGTCCAGGACGACTACAGCAGAA
CCTGCTACGAGGCAACCTACCACAACACAGAAGACACGACCTGCAACAAG
ACAGACTCCTCAAACACCGATTTCTACAACAAAATCGACAGTAAGACCAG
CAACAGACAATACGAAAACAACAACACAAGACCCCAACGTCACTAAAAAC
ACTACTACAACAACTTCTGAAACAACAGAAGGGACTGGTCAATCAACACC
TACAACAGATAAGTCATCCACAACCACATCAATCAGAACCATACCGACCG
ACGACAGTCTACCATTCAccatttcaaaattcatcaaataCAAGATCGGA
AAACTCTCAGATCTTTATGGTCTTCCTTTTAAATCATTGACCGAAATCTT
TGCAGCTCTGAACACGTACAATATCAAGAAAGTCATCAAGACAGGTGTCC
GGTACCAAGCTTGTCcgaaattatatgaaaaatcaGTTAAAACAGCTGCG
GATAAATTACTGAAGACATTGAAACGacaaatcaaacaatttaaaCGAAA
AGATAACCAAGTTTGTTTTGGTAATCGAAATGGGAAATATGATTGCGATG
AATGTTGTAAACCTTCAGTTAAGAAAAACTTGAGTGGATTTTGTCAATTC
TGTGTCTGTGTCAATG Run BLAST on NCBI transcript from alignment at scaffold_343:151469..152984- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00060503 ID=TCONS_00060503|Name=TCONS_00060503|organism=Clytia hemisphaerica|type=transcript|length=1516bp|location=Sequence derived from alignment at scaffold_343:151469..152984- (Clytia hemisphaerica)
TGGGCTCTTCCAGAAAAAGTCCGTTCATGGGGGGTGGAGGATGAATTGTC
CAGGGGTATTGAAAAAATACCAAAAAATTGCAATTTCCAGGGGGTAAATT
TTAATGTCCAGGGGTAATTTTTTGTGTCCACGGGGTTGGTTTGATGTTTG
TCCAGGGGTATAACCCGTGTCCAGGGGTCAAAAATCAAAATGTCCAGGGG
TAAATCATGAAAAAAATAATATATCCTCCACCCCCCATGAACGGATTTTT
TCTGGAAGAGCCCAATTCTTGGAAAAATAGTTACAGCAAAAAATTAGTTT
TTGAAGTGGTAGTTCTTCCTTCCTATATTTATAGTTATCGTTACCTATAC
TTTTAAGTGTAATATTACTTATGTCTTTTCTTCACATTTTCGTCCCACAC
AGCATCTTCACTTAGTCGTTTTCTTGACACTCACAATATGTGCAATAACA
ATCCATAGTCAAAATGCAAATGCGAATGCAAACGCTTGGAAGGTACGACC
GAGTAACAGGCCTCGATGGTTTACGCGACCCACAAGACCGACACGACCTG
TTGTTACTTACACAGATTATGAAACAGCAACTTCTGCGTCAACACAACCG
ACTACAACTACGTCTCAACCAACAAAACCAACACCCAAAACTGAAACTGC
AGCTACAACGAGATCAACATCAGACAGACCACAACCAACAACAACTAAAC
AAACAACAGCCACAACAAGTAAACAGACAGCTTCAACCTATTCCACGTCA
CCAAAGACACCCATGACACCTCCACGATCAACGAAAATGACAACAACTTT
ACGTTCTTCAATAACAGAAAACACTGAGCTAAAACCAACAACAAAACAAA
CACCCAATACAGAAATAACAACATCCTCGTCCAGGACGACTACAGCAGAA
CCTGCTACGAGGCAACCTACCACAACACAGAAGACACGACCTGCAACAAG
ACAGACTCCTCAAACACCGATTTCTACAACAAAATCGACAGTAAGACCAG
CAACAGACAATACGAAAACAACAACACAAGACCCCAACGTCACTAAAAAC
ACTACTACAACAACTTCTGAAACAACAGAAGGGACTGGTCAATCAACACC
TACAACAGATAAGTCATCCACAACCACATCAATCAGAACCATACCGACCG
ACGACAGTCTACCATTCACCATTTCAAAATTCATCAAATACAAGATCGGA
AAACTCTCAGATCTTTATGGTCTTCCTTTTAAATCATTGACCGAAATCTT
TGCAGCTCTGAACACGTACAATATCAAGAAAGTCATCAAGACAGGTGTCC
GGTACCAAGCTTGTCCGAAATTATATGAAAAATCAGTTAAAACAGCTGCG
GATAAATTACTGAAGACATTGAAACGACAAATCAAACAATTTAAACGAAA
AGATAACCAAGTTTGTTTTGGTAATCGAAATGGGAAATATGATTGCGATG
AATGTTGTAAACCTTCAGTTAAGAAAAACTTGAGTGGATTTTGTCAATTC
TGTGTCTGTGTCAATG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00060503-exon-scaffold_343-1575043694:151469..152984 | TCONS_00060503-exon-scaffold_343-1575043694:151469..152984 | Clytia hemisphaerica | exon |
| TCONS_00060503-exon-scaffold_343-1510915933:151469..152984 | TCONS_00060503-exon-scaffold_343-1510915933:151469..152984 | Clytia hemisphaerica | exon |
| TCONS_00060503-exon-scaffold_343-1491911889:151469..152984 | TCONS_00060503-exon-scaffold_343-1491911889:151469..152984 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_343 | supercontig | scaffold_343:151469..152984 - |
Blast
The following BLAST results are available for this feature:
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