XLOC_038068 (gene) - C. hemisphaerica

Overview
NameXLOC_038068
Unique NameXLOC_038068
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_344:39239..45897+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_038068 ID=XLOC_038068|Name=XLOC_038068|organism=Clytia hemisphaerica|type=gene|length=6659bp|location=Sequence derived from alignment at scaffold_344:39239..45897+ (Clytia hemisphaerica)
ATAGATTTATCGAAGCATGATCAAATGCTGCAAAAAAGAAAAGGCTTTTT CACAGGTATGTTTTGTCTACAGATAACAGTGCTCGCATTCAAATTTATCC ATCATTTGGGAAAGTAGAAGTCCTTTTACAGAGCTTATAAACACCAATTT TACCTACTGGTTGATTGAATTTTCCAAGTAAGCTAGCTGACCTTAGAAGT ATGTCTCATGACAATNATAAGCACATTAtaaattacttaggtattagctt ttctcgagattggctctttcattctttacgattttttgaacaaagatgca taactataaaccctcgaatgtgacggagcccgattttcaaaaaaaaattt tgggcaaatttgggccaaaaaacggctaaaaaatgggtttattggacttt gtgaaaaattggatcattaattttttctgattttttgcaggaaagtaagg taccatcataggtaaaatacggttcaagcagattttNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNatatgaaagaata tttcaagagcatgaaattttggtttctaaacgtgtttttttttataagaa acaaacgactaattttaatagatcgtcactatttgtgttagaatgattgt ttaatggtcacgcttatgtagatatcaattatatatgtgttaaatgcata accaggtaggtccataaaagtatcacttgttcttcTCCAAATGcatgcat tcacgcaatgtttttcgCGATTcgtgcaatttttttttattttcacgcat ttacgcaagtgaaaaagtccattcacgcattcacgtaaACCGCTGGTAGA GCCCTTTTAATAACATTGATAAGGCACCCTCTATTGAAAAACAGCAGAAC TTCAAACCACAGGTAGTATTAGAAGCTACTGTTGGTTAGAGGATGTTGGC ACTCGCATTATAAGTAATTCATGTTGTTATCATAGGCAATGGTTTTAAGT CAATTCGTGGAACCAGTGGATTATGACAACGCCTTTGATGCTATACGTCA ACGGACAACGTAAGTTGTTTTGATTCGCCTCGAATGATTTCTTCTCAAAT TGTTAATGAAATAATCACCAAGCTATCAAAAATACACACGAATCTGATTT GTCGAGAAGGACTTCAAGGAGTGAGATTGATCGTCAATTCAGAATGTGTA CCCACTGATCTTTTTATATAttctggaccaagtttctcaatcccgtcCAA GCTAAATCTTCGATCggagttttttgttgaaaattaccCTAATGGTAgaa ctactcaatagcggtgtaaatgcttcgagagcgctaggtctacttttcat CGAATACTTTAGATGATGCAGCGCCGTTTGACGTTAAGTTTTAACACTGC AACGGCTTCTTAATGGGTACCACTTTctgatcaaagatggtggatatagg TCGGTCCAGGGATATACAAAGGTTGGTGTGTGTATCCCTCCGATGTTTCG TCACTTAAAAACAGCTAATTAGTCTCAAGTGATGAATCGTCCTCAGGACT CCGACAAATTACGATTTTCTACTTGTTACTCGGTGATAAATTGTTAAAAT TGTAGTCTAATTTCACTAACAGTGTCCTCGTCGTGTCGGTAGAGATGTAG AGATAGTTTCTTTTATTCTCTAACAACATAATTGTTTAGTATAGATTTTT ACCGGGTGGTTGGTCTCTCGAATAAAACTAGGTTAGCCTAAACCACTGGT CTTCCCGTAAATCAGATAAAGATATGCATGTCTGTATGAATTGTTAATTT GTATCAGACTCAAGAACAGTAGATCTTTTAACAAGTAACAAGTAACAAAA TCTTAGGCTACAGGGGTGTGTTGTATGAAAGTATTCTACTTTATTTTCAG TGATGACGCTACAGATTGTTTTTACGATTGTTTGTGGGATGTCAACATTC TTGAATATCTTATCTGTATCTTTTTCATTGTCACACTGTGTTTTTTTGCC AAAGCAAAAGGTTATCTATCTACCCTTTTAAGGAGGGTTGATTGACTGAA GCTTTTGGAATCAGCCCGCAGTTTTGATCTGCAAAATTgctcagtcagtc agtcagcaTCATGTCATAAAATTTTCGCGAAACAGGCcttttgtaaaact tttttgtCTTTCGCGATTTTTGATTAATGAAATATTTTGTGGGAATTAAT TTCGGGAATCGTGAGGATAGGGTAAAAATTTTCCCTTCTTTTCCTAATGA AGTTGATACATGGTGAAAGTATTTGTTTTGACGATTGTTAAAGCCTGTAT GAGTCTGTTTGCTTATCCTGCAAAAACATTCCACAGCTCCATTATAAAAG GCAGACAATTCATTCAAATTCTTATTCGACACTTAGTAGTCAAAACATCT TAAACtctctggtcattaaaatggTTATATTAAAGTGAAGACATTGAAGT GTTGAGTCGAACAAATAAGTTACGTCACGCgctatcttttgttttgatga ttggttgaataaCTGCAATTTTTATGCAAGCTCAGCGTTTTTGAAGCAGC GATTTAGACCTCGGAAAACATAATGTCAATCTAGCTTTAAAGTCACTTGC TATAAACACTACAGGAAAAAAGAGTActtgaacatttttgaaaagtgact ttgaaaaaaaaagaaaatttcgcgaatttgacgtACTTAGTCATccatag ttttttctgattttttgcagaaagatgcgtattcgcaatgctcaaaacaa tgccgagttcgattttttgagaaaaaattttttccggccgaaaatgctgg aaatatacCAGAAATTAccgttttgcagattttcattggactttaaCTTT Aatctttaatcgtagaaattttagcgagacaaattttagcgtatatcagc gagtcaggaaaatcttgattttttttcgatttattttagcgaatcacgat ttcaaaaactttcgcgtggataaattttagcgaatactcgtattacatta ttgaattcgttttctagcttTTCTTTGCACtaaaacccttcctattgata aaaatgtatcaaggcaatatatcCAGAAATTTCGTGCGGATAAactttag cgatctgtcgattcggcgtgttttagcgagatttattttagcgaaaatag ggaagactcgctaaaacgctaaaattattctcgctaaaatttctacgatt aaagtaataattctttgttttttttcacacaaaaaccttattgataacaa tgcccaccatcaagcatgattcgattatcaataaaactgatttttgcaac cgggactttccatttcttttttctctGCTCCCCTCCcctctcccccatca acaatcaatgatgaaatttaatgtgttatgcatttttcgaaacgctatgt tttctgactgattattttcatttttctctttattgctatctaactttcat tatcaggtaggtccattcagcatgtagcttgttttacGCGAAGATCGCGa aaatttctgacattaaaGTAGACAAATCAAAAACTCTATCCCGTCACAGA AAAATAGAGATACATTAATAACTAATAACAGTATGTTAGTTCAAGTttcg ttatttttatttttcgttaatttgatattttaattttattttaggtGCAT AATTAATGTACAAGTTTGAATCTGCCTATATtcatatatttttgtttttt ctgacaATAATTCGGCTACTGAAAACTGCTCACTTTTTCTTAACAATTTC TTCTCATAAAGATACTCACGAAAAACGTGGTGAAATCGACAAACGAAAAC TAGCGGTAAGTCATCGTGTTCTTATTAATTCTTGGATAATTTATGAACAG AGAGAACCGTTTCATACTAAAGGGGCGAGATTTAGATGTTGAAGAGTTTa tggcccgggggggggggggggcNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNGACAAgtcgaaaatttgagaaaattttggaatttca gtcccattcagggtcacttttttcgcagtttttcggcaaaatttttgaga aaacgagCCCCACGTATgatccatttttcgaaccttagcggagcaccccc gttggtcggcaagggtagtacacCCCCCGGGTTGTTATGGGAATGCTCCT CAATAAAACTGTAAACGGGTTGCAAAGAAATTTTTGTCAGGGGGTTTGCA AAGcatttgtaaattatttttctgaatGGGACACTTTTATACTTgaattt attttacttttatgaTGTGAACATATACTTagggcgtacaaactttcgcg aacagaaactttcgtGATTTTCGCGAATcttggcctttttcgcgaaatta aatgtctttgaagattcttaacagggcaattcgcgaaagttcgcGACAGA CTTCTCagtgatttccaaaaaaaaaaacagtgggATCTCTCGCGGACCTT TCACGTTGTAAAGAGCTCAGAATTTTAGCTCCGCAATTTTAAAGTGGAAT GTCCTGATACAGACTCGTCAGTTGACAAAACTACTTGGGGAATCACGTTT TCTCATTTATAAGAACAGGTACCCTTAACATCTCAAACTATCTGTTTATC TCTTTAAGTTGATGCAACCGAAGGTTTTTATCAAAAGGTTTAGAGACAGA ACCCTTATAAAGTGATGGGTCAAGGCATTACTCCAGacaatattatattt ttatttatttctcacCCAGGTTCAAATTATTGGACAACCGGAACTGAATA CTAAATGTAATACGGAAACCCTCCAACAAGCACAATGTATACGGAAAACA CGTTTCCTACGGTCGTTGACACGTGATTACTGGAGATGAAGAGTGTGCAT ACGTTTGGTTTGTTTGAAGCAACCAATGGAAGGTGCAAACCGTTAAGAAT GGAGGTATTCGCCGTAAACATTATCCCAAGGCGGTGTTCTTTGATTAAAG GGCTTTCATCATTTTGTATGACCACGCCCTAAATGCGTAACCAAAGGCTT GATTTTATCTTGAAGACAAGCCACCCTTAAATGGCAAGGCGTTGAACAAA TCATTGAAATGGACAATAAAAACACACAATGACGCTATATAGCAACTTGT TTGTGCAGTTGATGATTCGAAATCTATTGCTGGGGTGTGTCTGGGGTGTG TCGATGCAATAATTACATGATTTTTAATTCTtaaataaattgataaaatt gataaagaCATACAATAAGCTTTTAGATATCATTAGAAATAACTTTGTGC AGTACTTATCAAGAGATTAATGAGatctttgatttttgagatAATATATC TTGAgaataccatgctatatattgtTTGGTCTTTACATAATTTGGAGATG TCATTTCAGAAGCAAGAAAAAGCTAGTATTTGTAAAGAAGGGCTACTAGA TAAATGCATCATTTTGTAGCAGGGCTGGCTAAGGACTTAAAGTTTTACAT AAGTgtccccgtttcatatcagacacatgttccATATCAGTACAGTGTCT GCCCATTGtcatattgtgctgatataagcaaaatatgtttttatttttat cttgctccacattcgtgtcaaaaCAATGTgaaatgaattaaaattgatga gtaatcaaacgatatcactcttatttaaaaatctATTAGTGATCCCTTTT GGTGTTTCAGATTTCTTCGGGTGTTCTATGAAAACTCTCGAATATCAAAA CTGATATCAGGATCTAGGATAGGTTTACTGGGACCGAAACATGCCCAATG GTCACCGTGAAATGAATAGGTTTCCCCATTCGTCCGGTTATAAATACGAT CATAGAGCCGGTCATCAGAGTTAATGTACGGTGAGGAAAATCTACCATCA ACATGTTCTGTACAATCAAAGTCGTCGCTCCCCCAACCATACCATTGACA CGCAGCTGG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00060521TCONS_00060521Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00060521-proteinTCONS_00060521-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_344supercontigscaffold_344:39239..45897 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.79 5.73 5.31 4.56 8.95 7.19 9.43 10.93 9.1 8.26 10.5 10.74 15.66 18.7 14.65 15.62 9.7 11.62 17.33 13.26 10.63 9.18 16.25 16.29 21.57 23.57 8.62 9.46 8.66 9.84