XLOC_038190 (gene) - C. hemisphaerica

Overview
NameXLOC_038190
Unique NameXLOC_038190
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_349:419983..426775+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_038190 ID=XLOC_038190|Name=XLOC_038190|organism=Clytia hemisphaerica|type=gene|length=6793bp|location=Sequence derived from alignment at scaffold_349:419983..426775+ (Clytia hemisphaerica)
CCTTTTGGACACCGAAATACACAACCTTCTCCTCCAGCTaaggttgaaaa tatttctgctAGATTCCCAAGATTGATTTCATTTCCATTAACAGTAAAGT AAGATGAAATTATTGTTAAAAAGATTGAGATAAAAAACACCACAGtccaa gaaaaatttttgacggccatatttgttttgattccaACAAACTAGGTACA AAGTACTTCATACTCACTTATCGACAAGGCTTAGCTTGAAAGCGACTCTA CTTTCACCTACACATAGGTtcacaaaatgtaaacaaacccaCGTTGACCG TCTTTTCATCCAAAACTCTTCCGTACCTTACAATCGTTTTAATACTGAAA AGGTTAGGCTGATAGGATTACACCACGATTACATTTTTCCCAATGACCGG ATTGGCATAAAATTACATCAGCTTTTCGTGAGAGCACGAGGTTGTAAATA TTCTTGTCCAAAGAATATAATCCTACTTAGATCAACTGAAGGAGAAGATG GCATCTAAGGtaagaattttttgatttctagCATGTAGTTCCcctgtttt tgtttaaaacgttaacaaatgttatttgatttaatgggttcaatgtatca aatttctcagtttagttgacactttggtatctttgttgcgtcacagcgaa aggattgtttttagtttagtttgtatctttgaaagatccCATCAGAATTA GGCAGGGTtgttggatttaggaccactcacggaaTTGAGTAAATTTGCGA AAtatatccagacgatctcaatcgaacggaatcgacgatcgagacagtcg aaccaaatctaacgcaatcgaccgattgaaattcgattgtcagtcgggtg tttaagataaaaactgcaattattgctcttttcggaaattattgccgaaa acggcaattttttaaacgatgaaatgctgaatcagcaaaatgtgttgtcc ttttaagggcaaagatgtcagaggtgtttgaaaattgtaaaattgcatcg agaaaaaggtttttcgggtttttaaaagtgattttttcaatttttcgttg ctcaataacttgaaaagttctaaaataatatgttaaaagatcctgcatcg atgccgaaacacagccagaaagaaataacaaaacccccgttgtaaatttg tttacatatgactcgattttgctatctgcatttctaacaaaaaccagttg aaaacaaaactaaacgaggcacagtgggcctacttatcgcgagggtgtca aataccactaGGGATTTATGTTAGGAACAGATCATGCTGATTACCCTCTT ATAATGTGCCATAGgttataaaaacttgaaaaaacatcaatttttagggT AGGAACCATTTTTGGTTTCCCTACCCGGGTATTTAGGGTCCACCAACTGC TCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNcttttctgctgattcagcatttcatcgttgaaaaaattgccgttttcg gcaataatttccgtaaagagcaataattgcagtttttatcttaaacaccc gactgattgtcgaacgcaatcgaatctcaatcgaatattaccgcaatttt cagattcgattgatgttcgattgtgtcgattgcgtttgatcgtcgattca ttgacccccgcatttttcatcgcataatttctacgggaaatcgaaagtaa tttcattcggcttgcgttcgatttggtttgactggttctATCGtcgattg ggccattccagaaaaattttgttaccccccgtcggacgacgtgcattttt taattttttctagcctcggaaataatttttcttttccagtgcgcagtggt ggtcggaaattccaataaaaatccatgtacttttgcaaaatgcatcggaa attccactcttttttgccttttttaattcaattgccttggaaattcacac attttcttctctcgccttggaaatttcgaagtttggtgaaaacttttgcc cttggaaatcctgtgtcgtccgcccccctgttacaaacaaattctggaat ggcccattccgttcgattgagatcgtcttgGATATAATAATTCTGGGAAA TCCTGTTAATTTTTAACTTCAGAGGACATTAGGggacccgtccatattca tttgacaacgcataaTGTCAAATTGCCGTTATCTTCTGAACACCCCCTAC CCCCCACAGATAACGTCAAGCAATTTATACCAAAAGTTGTCgccattttt tcatcaaagttttcctgtTACAAAGTCCGTACTTGGTTGTACCCGTGTgt gtatgtgttcttttaactaatgacctttatttaaaaagaaattaaaagct ccacttAGCGCTAGGTCCGTGCCATGCTTTAGGCATACCACCTTCTTTGC CCATTTGTGCGATGTGGTTCACTTGATTGCACAAACAATAAAAATATGAT AATGATATCATAGCGCGAACCAATGGGATTATATATGCGAGCAAATTTTC ATGCAATTCATgcacaaatatattttcaacagTTAGAAAAGTTTAGTGTG GTTGGTGGTAACAAATATttgcgattttcacaaaaaaatataccttgaaa cctaacttttgaaaccCCCCCCATcccctcataacgtcaatttgatgatt tgcgttgtcaaatgaatatggacagGTTGCCATACAATTTCAGTCAAGGA AATAGCATAGAACTAGAGTGCTGCGAAATACATCTTTACAATATTTCGCA GCAATACAGTTGCGCCCACACATTTTGTTGCTCTCCACTGTTGCACTGTT TGGTCTCTGTGAGGTAAACAAACCTGTTTTTTCTGCATTTCCTTAGGGAG AATTggttgagcttttcttaagtttttAAGAACAGAATCCCTctcaattt ttatattttctttctatttatGATATTATTACCACTGTGTAAAAACTCCT CGCAGTCAAAAATGCATTTTCCTGGCCCATTTCCAAGAAGAtaaaattac aagaaaaatccCTTTGACAACACTTGCCTTTGAACAGAAAACAGGGTTGA AGGGTGACACAAAAGCCTTCagaccatttttcatgcccttttagcgtccg gtcatcggacgctgcccccccccctgaaatctctgaaattttggtaaaaa cagcctttttagcagaaaaacacaagaaagagtgccctttttggccacca acggacgctgccctgcctttctaaaatatggcctggcCTTCACAAAATCA TGTGcattttagggaaaattttcTCACTAGGattttaatttcctacctaG GGATTTTTTGCTTAATCATTCTTGACAGTAAGGCTGAATATCATCGCCTA CTGGAATGTACAGGTCTTTCATTTCACAGAATCAACTAAAATTAACACTT ATCCAAATCGTGCTGGTCGAGGCAACTTTTTGTGGTCACAATTGACACTT GCTGCTAGTGGTGTGTTGTGGTTATAGATCTAATATACCTTTCCCCGTAT AAATTCAAACTTCCCGGAAAAATATGCGCTTCACCATTGTGCTCAAAATT ATTTGGGAGGTAAACAGCACATTTTTGCCAGGGTTGTTTACCTCCAGAAA ACCAACCTTCCCTAGagaaacgcaggcaaaaacagggttgtttacctcca gagaaaaaaatgttgggAGTATCAAAATAATGTGTGTGCATCTGTCTTGA TGAAGTGTGATTCAAAGCTATGAGATTAAATATTCTGTTATCTTATAATT TCAGCTTTGTTGAAAAAGTGAACGACAATATGGACGGATAATGAAAGATA AAAAAGATTCCTTAGGGAATATCAAACCATATCGTTTCGACAGTAATGGG TGATGGAGAATCTCTATTAGAAACTATGAAATTGTAGGTGAATTGTGAAT AAATTGAAAACGAGATAACAATAAAATGgagagtttgaatttgtttattt tgcaacAGGTCATCAAAAAACGTTCCTCGCATGAAGAGGGTACAATTCAA GACCTAAAAAAGCAAAAGTTTCATTTCCAAAAACTTGTTCAAAGCATTGA TTCTTTGTCTGATGGACAGGCTACATTATCATACAATGATGAtaattttc gtgaattttctgTCCATATTTCACCAAATGATGGACCGTATAAAGGAGGC AAGGTTGGGTTTAACTTCAAAATGAAGCCTTCGTACCCAAGCACACCACC TCAGATCACATGTCAAAACATTATTTACCATCCGAACATTGATGATGAAG GTGACATCTGCTTAAGTGTACTGAATGAATGGTCTAGCCAAAACAACGAT TTGGTGGATTGTATCCAGGGACTTTTGTATCTGTTACATTATCCTAATTT GGAGGATCCGCTGTCTCCCTTTTTTGCCCCTGGTGAAGACGAAAATGAGT TCCAAGAGAACGTAAAATTAACAATGGCTGGAAGTGTTTTTAATGGAGTt atttttgattgtttgttaTCACAATAAAACTTTTCGAATCATTCTTACTA AATATAGATCCTGTTTTAAACATTTGACCTTTCGCTAGACGTCTTTTAAA ACTAATCAAAATACCTggatttttttgcaattttcagtTTAGTTTCAGTC TGTTTAGTTTCATTTGTGTCCTAACTATCCATTTTTTGAAACTCCCAGAG AGGTATCTTGCTGTATAGCAAATCTTTGTGTAAATTGtaaataacatatt ttttttaaaacaatttgaaatatcagatatttttgtcgattttgtGTTTT ATAGTTTTCTGGTGATCTGAATTTTTAGATTGACTATAAGTactattttt taagaaaatcaaataatataaaatttaaCAGACAATTATTTTAAGGCTAT GGTCTCAtctcatacacgctttttttataagtgCTTATGGTGtgctttgg atgagggtcaagtattcttaggaaaatgcgaaaattgagggtgaaatatt cttaNTGTCAAAACATTATTTACCATCCGAACATTGATGATGAAGGTGAC ATCTGCTTAAGTGTACTGAATGAATGGTCTAGCCAAAACAACGATTTGGT GGATTGTATCCAGGGACTTTTGTATCTGTTACATTATCCTAATTTGGAGG ATCCGCTGTCTCCTTATTTTGCCCCTGGCGAAGACGAAAATGAGTTCCAA GAGAATGTAAAATTAACAATGGCTGGAAGTGTTTTTAATGGAGTTCTTTT TGATTGTTTGTTATCACAATAAAACTTTTCGAATCATTCTTACTAAATAT AGATCCTGttttattttaaacatttgACCTTTCGCTAGACGTCTTTTAAA ACTAATCAAAATACCTGGATTCTTTTGCAATTTTCAGTTTAGTTTCAGTC TGTAGTTTCATTTGTGTCCTAACTATCCATTTTTTGAAACTCCCTCAGAG GTATCTTGCTGTATGTATAGCAACTCTTTGTGTAAATTgtaaataacatt tttttttaaaacaatttgaaatatcagatatttttgtcgattttgtGTTC TATAGTTTTCTGGTGATCTGAATTTTTAGATTGACTATAAGTACTATTTT TTAAGaattaaagaaaatcaaataatATGAAATTTAACAGACA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00060783TCONS_00060783Clytia hemisphaericatranscript
TCONS_00060784TCONS_00060784Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00060784-proteinTCONS_00060784-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_349supercontigscaffold_349:419983..426775 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
65.83 59.07 146.73 165.65 47.65 36.72 58.65 60.51 41.63 50.26 21.37 20.6 13.92 10.04 13.45 14.53 20.77 17.95 9.16 18.27 21.55 24.11 76.21 64.88 13.17 18.39 35.9 31.24 50.12 53.09