XLOC_038254 (gene) - C. hemisphaerica

Overview
NameXLOC_038254
Unique NameXLOC_038254
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_350:22555..28307+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_038254 ID=XLOC_038254|Name=XLOC_038254|organism=Clytia hemisphaerica|type=gene|length=5753bp|location=Sequence derived from alignment at scaffold_350:22555..28307+ (Clytia hemisphaerica)
tttttcttttcagtgTTAAAAAGTaaccaacaaacaaaaaaattatgcaa tAAGATGCAACCCAATGCTAATGTAAAAAGAGGTCTTGCATCTTTCAATA CCTCATTGAAAACTGTGAAAAGCAGGAAAACTGTCATTGTTTTCATTCTG GTTGGTTGCTTCTTCCTGTACTTGGCTTCTTCTTATTTACTTCCTGCACA CAAACATTTTCATCAAAGCCAGACCAAAGACTCTTCACaagacaaaaaga aaagatctTGTTTGGAGAACTATCTTGTGCAATGGACACAACTGATGGGC CTCAGTGATGCAATCATCAAGAAGATCCCAGCCTCGTCTACTGAAAATCG ATTCTTCCCTTTTTCAGGTGATATGCTAtgaattgaccaaaatattcgCT TGTTTAAAAACTCTCAGTGAAGTTATCAAATCGAACAATGATTGTATTTG TTNGAAGATCCCAGCCTCGTCTACTGAAAATCGATTCTTCCCTTTTTCAG GTGATATGCTAtgaattgaccaaaatatttgcTTGTTTAAAAACTCTCAG TGAAGTTATCAAATCGAACGATGATTGTATTTGTCatggaaatctaaaaa aatgcaaactgaatttcactttttcctgAGAAAATTACTCTACTTTAATA GAATAGATTTAAAAACTTGAACTCTTTAAGGAAACTGTCGTGTCGTAAAG TTAtagattttttctttcaggCAATGGAAAATTAGGCTTTGGCCTAGATA AAGACAAGAAGCAATTCTATTTGAAGACTGACACACACGGCTACATTCAG TCATTTGCACCCACTCTTGACCTCAAGATACAAGAGTCTCACATTGTGGA AGAAAAGGCTGTGATTATGAATTTGAAAGCTGGACTTGTTATTCTGGCTA CAGTGTTTGATGTTGTAAGTAATCTTTGCATTTTCAAACACTCTTAATTT TCAGTCACTCTAAATTAGAGCAAGAGACACTCATATTCGTTAAAATTAAT TTGACTGTTCATTAATGTCGAACATTTAGCTTTTGTCAAGTTTGACAATT TTAATTCTGTTAAAATCCCTGGAAAATTAGGACAGAGAAAACTAATTTTA AACATGATTTTATCTCTGCAAATATCTGCAGATTGTCTAATATAGGAAAC GAAAAGTTTAAAGTTTCTACACACTATTTCATGAAAACACAGTTTTTTGA AACTGTCGGTAACTATTTGGCCAGAGACCCTAAAAAATTTATGCTCGAAC AGCACTAATTCAAATTTCCATCCTCTAGGAGCAAAGCTGTGTCCTTGTCG AGGAAACATTTTTCGCACATCGCCTACACAGTGGTCTATTTCAACATGTC ATCAAAGTGAAAAATTCTGGACCCTTCTCCATCGATCTTGAATTATCCAC AGCAGACgtcaagaaactgaaaaaaattgaaaaaattcacaCAGCACATC ACACTAACGGTCACCTAGCAACCATCAGtggtgaaatcaaaacaaagcgA AACAAAGAGAACAAAGAGGGCTTGGTCAAGTTTACATCTGTTCTCTCCAG CGTTGATAACAGGGTCTTGAAAGTACCACAGAAAGGTGAAAAAAGTATGA AACTCTTGTCTTATACTGATTTCATCTTTCTGGAACAAGAGCCGCAAGAA GTTGTGCCACCCACCAACAAGACTAGGACTGGAAGAGACGTCAAAGATAC AGACATCATCGCTTTGACTGAGAAATCCAACACCATGCTCAAATCTCTCT CTAAAGATCACGTTCAGGATCAACATGTCAAAGCATGGAGTGAAATTTGG ACGGTAAGACGgtactttcatttttaattttcgaatTCTCCAAAGCTACA AAGCTACTCTAATTCATGGTTGAAATGAATGATGGGTAATCTGGTAGGAT TGTGCTCTAATAACGGCTTTTTGTTGGTTTAAACGTAAAAATTTTAGACC AACTAAAGTTGTCATCAGGGCCTGGTGGtactgattacccatgatttcTT TCGAATGAACAGAAGCCTTTTTGTGCTTTAACTCCATCAAACTCCTCTTA TACAAATCCTTAAAAAGATATTCTAGATACAATGGTCTATTGTGCAGTCA TACTCCAACATCCATTTAAAAATGTATTTCTTATTTTGTTTTATAGACTG GTATTTCAATTTCATCAGATTCTGACCCAAATTCGCCATCACCATTACAC GTCAACTTGACTCAATACTACTTATACACCACACACAGTGGTAACTCAAc caaaaaatcaaccaaatccGTCAATTGTTACACAGGGCCACCAACTTTAC ACTATCCAAAACATTGGGTGGTACCGACTAGTTTGAGCTCTTTAAGTTCA TTGATGCAACTATGGGAGGATTTCTTTACACGGAATAATTGCCCTATATC TTCTCTCACTGCTTTTTCATTACCTCAATTAATGGTATTGACTATCGTAG GCCTACATTATCACAACAAGCAGCTACAAATGGCTCTCAACCCTTTGAAC TTGCGTACCAATATTTCATTACGACATGTATCCTTAGACTATTTCCATTC ACAAGATCAATTCGATCTGAAAGTTTTAGTGACCAATATCAAAACAGAAC CGTATCAAATTTATGTTATGAATAATGGTAAACATTCGCCGAAGATTTTC GGTTGTGGTAGTGCGTGTGAGCACGTTGTAGAGTTGGGCAGCTCCAGACT AAAATTCGTGATTCACCCAACAGATCCGGTGACTCCTCTTTTTTACATCT CCAGCAACCGGACTCTTTTGGAGAAGATCCACCATTCAGACTTTATGCGA AAAGCAATACATTCTGCGAAGGAGATCAAAGCGACTGCTCACCATCATCA GCTTTCGCCTAAATTCTGGATCTCCGTTGTGGTGCTCATCGTtagttttc atgttattgttttgaaaatgatataCAATGAGTGTCGGAAGGGCCGGGGA ACGGTGCCACGCCGAGGTCCTTATAGTTAGAAGAGTGTCTCTTTTTATAC AAGGTTTTTATACAAGTGAAATTTAAAATAACCAACATATATATATTGGT GcatatattttttgatgattaaTTATTGCTGTTGTTATTATCCTTGGAGC TCAGGTGAGTGTTATCGCATTTATTCNAAAAATCAACCAAATCCGTCAAT TGTTACACAGGGCCACCAACTTTACACTATCCAAAACATTGGGTGGTACC GACTAGTTTGAGCTCTTTAAGTTCATTGATGCAACTATGGGAGGATTTCT TCACACGAAATAATTGCCCTATATCTTCTCTCACTGCTTTTTCATTACCT CAATTAATGGTATTGACTATCGTAGGCCTACATTATCACAACAAGCAACT ACAAATGGCTCTCAACCCTTTGAACTTGCGTACCAATATTTCATTACGAC ATGTATCCTTAGACTATTTCCATTCACAAGATCAATTTGATCTGAAAGTT TTAGTGACCAATATCAAAACAGAACCGTATCAAATTTATGTTATGAATAA TGGTAAACATTCGCCGAAGATTTTCGGTTGTGGTAGTGCGTGTGAGCACG TTGTAGAGTTGGGCAGCTCCAGACTAAAATTCGTGATTCACCCAACAGAT CCGGTGACTCCTCTTTTTTACATCTCCAGCAACCGGACTCTTTTGGAGAA GATCCACCATTCAGACTTTATGCGAAAAGCAATACATTCTGCGAAGGAGA TCAAAGCGACTGCTCACCATCATCAGCTTTCGCCTAAATTCTGGATCTCC GTTGTGGTGCTCATCGTtagttttcatgttattgttttgaaaatgatata CAATGAGTGTCGGAAGGGCCGGGGAACGGTGCCACGCCGAGGTCCTTATA GTTAGAAGAGTGTCTCTTTTTATACGAGGTTTTTATACAAGTGAAATTTA AAATAACCAACATATATATTGGTGCatatattttttgatgaaattattgC TGTTGTTATTATCCTTGGAGCTCAGGTGAGTGTTATCGCATTTATTAATT AATTATCACAAGAATTTATTTATATAATTGACTGGAGCTGAATTTTAAGG TCTTACTTTACTAAACAAAATAatgattttacaatttttacccTTATTAA TATTTGCATGcgatattttttttacaaagtgttggtttaaataaaattat ttcgAATAAAGGAAGCAAACTAAGGCCATTCAACTAAGGCCATTCAACTG GGTATTCCAGAAAATTTACCCACCCTGTCGAGGAGGTCATATTTATGGCC CTGGGGATACCTTTAATTAAACCTGGATAACCCAAGGGTTTAAGTGGAAT CTCTTGAAATGGGcagacattttgaaaattggataaGACTCCAACGGGTT CTACctcaaaaattgtcaaaaatccaggttgtgtattgaaattcaattca aagcaGTTTGGCGTCCTCAACTTTAAAGCTATCTATTTGCAGAGGGTAAA TCCTTGGAACTGATTGTGTGCTGCATTGTGGGGCATCTTTAAATGACAAG TTGAATaagttcaaaattgaaaaaaccttTAACTGTGGGTTTTTGCTATA AAATTGGAATGGAAGTAGGGGAGTTGATACTAAAATCTAGGACATCAGGa tgtttagtgacgtggtggtatacccaaaaaacttaaaaatccttttagta caaTTTGAACAatgggtactaaaataccaaaaaggtggtatccagaataa aatttgaattttttttagtaaattggtactaaaattagtaattttcatga ttttattaatctttttcacaaattttcgtGATGTTTTAGTACTTACGAGA TTTTAGTACCACCCCCCACTGATTGAGGAGGGGGAAACCAGGGATACGTT TGATAACTAAGATGTTTTCACAGTTCGTTCGAGAGATAGTATTAtgcgtt ttttatttttctaaaatatgatAAATTATGATAATGTGATTATAGCATGT ATAATTGTTCTTTAGggagtttttttttcgaattagtCATTTTTACGTGA GGAAGGAAGGTATATATTACATGAGGATCATTTTTAAAGTGatcaaattg aagaaaatattttatataataCTCTTACAAACCTAAAATACTTGGTTATT TCTACATCATTTTATGTACAAAACTATTTACAGTATTAAATATCTGAACT TAAATAATTTGAGCTACAGTAGGTCCCGTAGAAGGAGGAAAACTCAGTCG GGTAAATCTTTTCGTCCGGGGAGACTTTTGTCGGGGGAAGACTTCGTCAC TTTTTGCCGACTATTTTCTACGATGCCACACACGTACACGTCACTTAGAA CAAAAGGGATTAATGAATTAGAAGAAATTAATGAATTAGAAGAAATNTAC GATGCCACACACGTACACGTCACTTAGAACAAAAGGGATTAATGAATTAG AAGAAATGGGTTTTTTTCTTGGATTCTGTGCAAATCCAATCATTATCTAT AAGACTTTCTTAGTAAAAGCATGGTAGAGAATGGTTGATAGTTTAGAATA TCACTAAAATCCCCTTCTATGGCTCATTTTTTATTATCTATATAAAAAAT TATCGATGTAccttgaaattcaatgtttgattttttaaacttcATTTTCC CTGATATAAAGGGAAATACTGAGTGTTTTATTCTCATACATCATGAGGGA CGTCGTAATTTCgtctacgatatttgaagtatacAAGCACACTGATGGCC ACGATCAACAACAAAATTAATCCCACTACGATAAAAATCCAAACTTTCGT TCC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00060932TCONS_00060932Clytia hemisphaericatranscript
TCONS_00060933TCONS_00060933Clytia hemisphaericatranscript
TCONS_00060934TCONS_00060934Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00060933-proteinTCONS_00060933-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_350supercontigscaffold_350:22555..28307 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
LOC102724984PREDICTED: uncharacterized protein KIAA2013 Homo Sapiens
KIAA2013uncharacterized protein KIAA2013 precursor Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
13.02 12.09 8.17 6.89 19.28 14.06 12.44 14.06 6.91 9.02 9.43 4.65 6.21 5.35 5.17 6.25 9.04 8.05 4.7 6.04 5.45 4.97 17.58 17.77 15.25 14.01 10.71 7.81 19.6 22.13