XLOC_038262 (gene) - C. hemisphaerica

Overview
NameXLOC_038262
Unique NameXLOC_038262
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_350:165450..170554+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_038262 ID=XLOC_038262|Name=XLOC_038262|organism=Clytia hemisphaerica|type=gene|length=5105bp|location=Sequence derived from alignment at scaffold_350:165450..170554+ (Clytia hemisphaerica)
aggCTAGGAAAAGAGTAtaaaagaaacaagaaaaatctggAGAAATGGTA TCTTTCATTTGTGACGCATGTGGGAACACTGTTAAGAAGAATCAAGTTGA AAAACATTACCAAACAGCGTGTAGAAACTGCTCTGTTCTATCATGTATTG ATTGTGGGGTTGATTTCCCTGGCGATGCATATGCCTCTCACACAAGTTGC ATATCTGAAGCTGAAAAGTACCAAGGACATCTCTATCAACCGAAAGATAA GGAAAACAAAGGGgaagcaaaacaaaaacaatggaCACAGGTTTGTAAGA TAATTACACACTAGCTGTTAATCATTTGCCACAAGAATTTGTCAGAACTC AATGCTGTCAGGCTGCTTGTCTCGCAGGTACAAATATCATTTAGAGATGT TTTTTAATCAAGCAAATTTTCTGAATAATCTCTTCTTTATTGTATTCCAG CAACTACAGGGTGCATCCAGTAATGTTAAAGATCCAAAGCTACGATCACT CCTTGAAAAGTTGTCAGAATATTCAAATATCCCAcgaaaaaggaaaaagt ttGAAGTAAGCCAGCCTCTTAAAATTTATAAATAGTAGAATTTAGTATAT tagaagaaacttttgatctaaatTATTATAAGAACCGGTTATTAGGCCCA TTATATGAAGCATATCGAGTTTAAAGTGTGGAAGGGCCTTGAGTTGAAAC TTTTGAATGGGGAAATgtagccacttatttcccatctaaaacATGTGACC TGTCTGGTTTTCACACAATCACCAGATTTCCAGGTTATTTAGAATTATCA ATATAAACTTAATACACTATAGGTTAGTTTTTTGTGTCTCCGTCTAAATC GAGTTTCCTTTACTTATTATTAAATGAAgcactttcaaagtttttttctc tcatagaatttttgcaaaaacagTGTCAAGGTATACGATACAAAAACACT TGATGCACTTTGGGATGCATTTAATGAAGGCTCAAACACAAAAACGGTAT GTAATTATATTAGATTTTAAGGTTGAGAACTCACTAAGTTTACTCAttgc gtattttttttaaatttcaatcaaGCTTTACTTTGGAGAACTGTGTATGT AATTTCTGATCAAcgatttgaaaatatgataaagaAGATATAAAGGAGTA TCACCTGAATGTAGCAAATTATGTTACGAATCCACTGAAAGACTGAAAAA CTTAAtaaactgaaatttcattttccgCAACAGCCTACAACGAACGGTAA TACACAAAATGGACATAACAATACAACAGATGTTAACACGAATGGTACAA Cgaacaacaacaaggatgatagtgaagatgaaaataaagtcacagaatca aagaaaaagaaaaagaagaggaaGCTTGAAGAAGATGAGGAGAAAGacca agataaacaaaaaaataagaaaaagaaaaagaagatagCTGACCAAGAAG AAATAGGTATTTATTGTCAAATATGCTTAAGTTTGAATTTCCTGCAGCct aaatttatttgtttttaaatgacgTTGAGATGACGATACCCATCCTATTG TAATGTTTTCCCTTTTCTCAGACGGGTTGATTTTGTTTTCAGAAGAGGTG CAAGGagaagaaaaagatgaaaatgataaCCAACATAAAGGTACTTTTTT CAttaggaaatatttttgagGCTCTCTGCTCCAAATCTCCAAGAAATAGA TGTCCCATTTGATGTGTTTGACCTTGTTACACTTGTTTACACCATTATCA TTAACATAGTATCCATTATTACAGATTATTATCATCTAAAAATTATCCAT TATCTTGTAAGCATTTTCAGGGCAGGGCCCGTAGgttaaaaaaaaccttg aaatggcattttttgtaaGTAGTCGAAAAGAGACATAATTCGAGGCAAAA TCTTGTAAATTTCTCAAGGGAACTtgcttttataatttttaaatcttttt tagcctaatatttatttttttttgagttgaaaaattactttcactccttt ataaaaattatattgtttttcGTCAGGAAACACGTGCCTAAATTCCGTTG CAGAGGAAGGGTAGATTTTGCCGACTGAAAAGCCAGTAATCTAAAGAGAA CTGATGTGACCCCCTTGCTTTCAAATAGGAagaaatctatatattaatag cggtgctttgtgtgtctgtgtgtcaccactttcgttttcgctttgtttgt gttttaaaattatgacttttagtctcttgctccacaagtttgttctattg gattcgcgccatttgcaaaagatcggatagagcttggtttagactttatt cagcctttgttttgaaaaggccGATCTacattttagtaattttaatttct gcccagagttgtctttttctctcttcttttgttttaaatgttttcgaatg tatttaacgatcgtatttattaatgacattcgtattcttttcaaagcaaa acaatttcatttcaaagaaaagaatatttcaaaagtaaatcagaacataa aaatcaaaatgtttgtggacaacaacagcattcaaaggatATAATCGATA TAATgatataaagcataagaaaaaattagttcacttctttcttcttataa aaatattcaagtcgtcGTTATGTTAAAAAGTGtatacgtcattttttatg tttaaattcgaaaagttatgccaagggtttaaaaaagaaacttagaattg tcttatttctttcgatctgataaaaaacaaagagttgcactattctttgt gaccttcccactttttcctgaaaaattgtcatttaaactggCATATTTAA Cgcaagcgaagcgagaaaaataactacctgcagagtcgttttaaacgaca ctggtacagtaaacgatgctctttttgataacttttgactaaaaaattaT ATCACGGGGGGACAGTacacgatccaaatatggttaaaagataagacagC CGGGGTaggttagagttaaacgttgtagagatttctttttttttgtttga tcgcttttggacctaccccggtggaggtcctataaattaacctttgtccg tctgtccgtccgttagttaccagcttttctcgagattggctcattagttt tttNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNcaa tgcccaaaatgtgacggagcccgattttcgaaaaaaaattttttggggca aatttgggccaaaaaacggctaaaaaacgggttttttgaactttgtgaag aattggatcattaattttttctgattttttgcacgaaagtagggtaccat cataggtataagatggttcaagcagatttttgcaaaaaaattttgttggc tcaaaaaccgcatgtttatctataagaatcactattaataagcatacatc aatgttcttagtcaaattactcaatttttttatgagataattgttttttc tgctcaagagggcttacttttgaagaatatgtgtgtttagacaggaaatt tgggttgcttggcgtgtttttatagaaaaactggccaaattNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNtagaaaaactggccaaattcgatattttt ttataagcacattatcaattacttaggtattggcttttctcgagattggc tctttcattctttatgattttttacacgaagatgcataactataaaccct tgaatgtgacagaacccgattttcgaaaaaaaatgtttctgggtaaattt aggccaaaaaacggttaaaaaagaaggttttttggacttcgtgaaaaatt ggatcattaattttttctaattttttgcataaaagtagggtaccatcata ggtaaaagatggcttaagcagatttttNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNcactattaataagcatacatcaatgttcttagcca aattactcaattttttggagatgtttttttgctcacgaagtcttgaatat gaaagaacatttcaatagcatgaaattttggtttctaaagGTTTTTTATA AGAAACAAACGACTAATTTTAATAGATCGTCACTatttgtgttctgaatg attgtttaatggtcacgtcacgtagatatcaattataaacgtgttaaatg cataatccaggtaggtccatcaaagtatcacttgtttaagCCAGCTTTAA CATCCAAAgaacttttagtgcgttcagctacagcttaaccggcgtgcgac gccgggtaccggctagtaaaATATAATTAGGGTTGTATTGAAAGCACGAT CTACTGTATTCTACCTGACAGGGAAATTCCACTGGCATAAGGCAATCAAA ACGGCGTTGAAAGAATCAGATGATCACGAACTTCCTTTGAAAAAGCTCCG AAAAAAGgtaatttcttgtttttatatCCAGAGAAAAATTTCTCAGAACT CTTAGAATAGGTTGTTATTCAACTTTCTTTCTCTTAAAGTAATTAGCTCA TTTTGAATCAAATTAAGTCATTCTGAAGTATTTCAGAAGAGCAAATAATT TATATTCCTAGCAAATTCTTGGATTGGTATGAATTAAATCGTGATAATAT TTTTCAGGTAATAGCGGCATACGAAGCACATGGCACGGACCATCGAGCGA GCGATCTACAGCAGTGTCGAACATTGTTCGAAAAGAAATTGAACACTTAT CCAAAAGCTAAAATTATCAAAGATAAATATGTGAAATTATGTACATGATA ATACAACAAAATGAATACTTTTTATAACAATTAAATCAAATGATACCCTT AATGTTGTTCCTGCAGGTTGGCCCTGGATTTTAGTTGTTGAACAGAAAAA TGATA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00060951TCONS_00060951Clytia hemisphaericatranscript
TCONS_00060952TCONS_00060952Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00060951-proteinTCONS_00060951-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_350supercontigscaffold_350:165450..170554 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
LYARcell growth-regulating nucleolar protein Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
85.77 80.15 41.7 36.75 77.45 60.75 71.54 78.87 50.46 36.6 50.67 49.14 57.02 60.28 66.18 61.71 52.58 59.83 28.22 25.8 59.9 54.13 77.47 65.88 62.61 63.32 28.97 31.78 42.29 49.1