XLOC_038396 (gene) - C. hemisphaerica

Overview
NameXLOC_038396
Unique NameXLOC_038396
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_354:1203339..1210352-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_038396 ID=XLOC_038396|Name=XLOC_038396|organism=Clytia hemisphaerica|type=gene|length=7014bp|location=Sequence derived from alignment at scaffold_354:1203339..1210352- (Clytia hemisphaerica)
NNTCATTCGATTCTTGGACATTTTCACAGTCCCAAAATTTGTTCAAAGTT TTTTGTAAATCTGTGTTCGGTTCGCGTATCTCATACTGGCACTCTAGAAC ATGCGTGGTCAAAACGTTTGATTCTAACGGATTTTTGTTAATAGAGCCGG ACAAAACATAGCCTTGGAATTTTTGACTTTTTGGTCGTTGAAAAATCTCC AATAATTATCAGCACCAATCAGCATGTCAACGACTAACGGAGAGTTCTTT GGATTCGAATCTGCAAAATCTAACGAAGCAAACTCAGGAATTTCATAAAC ACTTTCAATATTCTGATTCTTCAGTGGGTGGCAAATTTCGTTGCACAAAG CAGTCACTGGAATTTCACAGTTTTTTCCTTTCACGGTAACTTCGAAAACG TTCAGAGTTTTGTTTGTAGAGTTATCATTAAAACTCTTAATACATATATC TTTAGTCGCGATGGGTTCATTTAGCTCGAGTCTTTCAGCAGCTTGCGGTG TAATATACGTAATCTGTGACCCCAAATCAAAAAGAATTCTCATTTTCTGT TCTTTCGTTTTACTCGAAACGGTAGCAGTAGCAGTTTGTAAAAATACATT ATTATTCTTTGACCCAGCTTCACACGAAACACTTTCATCGTTTCTCTCCT TTTTAATCGAACTGTCTTTCTCTTTTTCTTTCGTGAGAGTTTCAATGTTT TTATCCTGCTCATTGTTTGTACAAATCGAGACGTGGTGTTTTCCTTTACA CACAAAACATTTCATATTCGTTCGACATTGTTTTGATGAATGGCCGATCT TGAAGCAACAAAAGCAACGTCTTTCCTTTATTTTGTATTATAGACTTTCT GATTTCTTTATTCTCTACTAAATCACAATATTGTTCTTTGTGATTTCGTT TACAAAAGATGCATTGCATTCTTTTTGAGGAGGCGTTGTCATGACGATTA GATCTTTGTGTGTGACCTAACAATGAACTTCCAGTAAATTTACTCTCTTG TAAACAACTTGAAGAGATTTTTTCGCGAGCTACAAGCTCATTTTTGAATG TTTTTAAAAGTGTTAATAAATCAAATTTTTGTTCATTCGAAATGTTTCTT GAGATAATAAGTTGCATTTCTCCAGGCATTTTATTCATCAAAAGTGGGAT CAAAAGTGGCCCATATTCTTCATTTTTCATTTCAAAGGTTTCTAAATTTA AAAGGTAATAAAGGTTTCGTAGAGCTTTCAAATCATTGATATTAGATACC GATTCAAGTTCAATAATTTTCCCCATATGAAACGATATAAGTTTTTCTTT GTTGCCGAAGCAAAATTTTTTTCCGTAAGCGACCCAAGCCCTCATTTAGC GGTCCAAGCCCTCTTTTTAGAATTCTATGATTGCGCCAGCGGCCCAAGCC CTACTTTAGCGGTCGTAGCCCTCCGAAAAGTATTCTGCGGCTCAAAATAG CGGTCCAAGCCCTCAAACAACGGTCCAAGCCCTCGGAAACTTAGTCACTT TTTTATTCTGGGTGATAATCAGCGGTCCAAGACCTGAAAAGGTTAGAAAG CAGAAAAATATGCCGAAAGAACAACAGAATTGGCTTTCACACTAAAGCCT TCGAATTTATACGCACACGAGCCACGTGTTTTTTTTTCTTTGCTTTTTTG TTATAATGTTTATAATAATTAATGAGAAAAGTAAACAAAGTTTCTATTAA CACAATTATTCCGACCACTTGGAATGTCAGTATGCTCTGAAGTGAAATCT CTCGATCTCTGAAGAAGCGAAAAAAATATGGATGTTTTTGTAAGTTTATT TCTTGATTTCTTTGATAGGATTTTGAATTTGGGTTTTCAAAACTCTTACT TGTAATCAATAATCAGTTCAACTGAAAGACCGTGTACAGTAGTAAAAAGA AATCAAAAACTTTTTAATCCTTAACTTTTTGAATTTTAGCCTTGCGTCCA TAAGTATAAGTTCAAAATGAAAACTTCCACTGCCTTTCCATTTATGCATT TAATTGGATACTTCCCCCTTCTTTAGGTGAAATTCTTGAAAATCACCCCA TAGCAATTTATTATACCTCATTTCACACCACTTTATGATTTTTCTTCCGA AGTATTACTTACTGTACCCCCCTGCTTATTCCAGCCAGTCAACCTATTTA AGCACAAAAGAGGTGCTAAAGTCTATTCAAAATGATTTGCTTGAGGCAAA CAGGCTGTAACTTTTGATAGAATTTTAATAAGATAACGATTTTTTTGCTC GTTATAAATATTTCAATGAGTGAAATATTATCGGCTAAAAATTCCAAAAA TAAACTTTTATTGTATTTTTTTTTATCATATAACCATTTTGTTCACATTG ATGATGTTCTAGGATCAGAAAATCATCCCTATGAAAATGGTTATTATACA GTAGAACAATTGTACTCAAAGTTTACTTTTTTTCTTCATTTTTTACTTTT ATTTTATATTTTTTAGTCAATAATATTCCACACAAATCTTTACAACGAGC ACAAAAATCGTTATCTTATTAAAATTCTATCAAAAGTTACAGTTTTTTTG TCTCAGCTGTCAATTATTTTTGAAAGCCTTTAAATTTATATATACTAATT ATAAAATATTTTTGACCCTCCATACGCATGTTCTCATATATTAATGTATT TCTCCTTCTTAGAATGCTGCTCAAGATGTTTATCTATTCGATAGATTGAA ACGTTCTGACATGGAAATCTATTTTGTACCTCTTCCAATCCAAGTTTCTA CTGTTGAATACAAACCAAAGGTTAATGTGGATGATCTGAAAAATGGTTAC GAGGAAAAGCTTCTCCTTCCCTTTAGCTTTTGTAATGAAATAATAGAACA CTTTAAAAGTGACGATGACGATTCCGATTCCGAAGTCGCTGTAGTAGAAA ACGAATATTTTTATTACCAAAAGCAAATTTATTCATGTTTAAGAATTCAC CAAATTAAGTCAATCAAAGTAAAGTTGGCGAAAGAAAAAACATGGTTCAA CCGCTCAAAGAGTTTTACTGCACCCATTAATTTGAAAAGGGTCGATCAAA GCACGCTCTCAAGTTTTATGACAGTAATTCGCGAAGGAAATAACTATTCA ATTGCCCATAAAGATTATCCGGGACTTGAAATATCAGACCTGGCATCGAT CATTGGTAGCGGTTGGCTAACACTGCCTGTCTTAAATTTTTATTTGAATT TACTGAACAAATTGAGAAAAAATGTTTTCTCTATCACTTTAGCTTCATTA AAGAATATTAAGGACGACGGTGATTGTCTTCAAAAGCTGATAGCCTCTTT ACATGAAAAGAACATTACAGTGATGAATATTATTGCAAACGTTGGAAAAC ATAATGGTTCTGGAGAAACCTACTTTTCTGTTTTTTCACCTGGTTTTCAA GGAACGCACTGGGTGTGTGTATCGTTAGCTATCCCTGAGGGTAGAATGCT TTATTGCGATTCTCTGGTTTGGGACGCTCCACCAAATATAATGGAATGCC TCAACTTTATAACTTCTTTGTTTGAAGAACAATTCGGAATAGACTCATTT GACCTTCTTTTTGCTAACACAGGAAAATGTAATGACAATATCTTCCCATA TCAAGGGCTAAACTCGAACATGTGTGGTGTTGCAAGTGTCATCAGTGCAC TCCTCATGACTGATGACACTTGCAAAAGTCGAGTTTTGCAAGGTCTGCCA CTGTCAGAAAAAGTGTCATGGGTAGGAAAGATGCATGCTTACAATGACTT TGTCAGAACCGTTTTGATCAAGTGGTACCAAAATAAGACAATCAATGTGA TTGATGTTGGATTGAAATCTACTAGTCAAGTATGTTTGCTTCGTCCCTGT TTGCATTCCTTTTCTTTCTGTGTAGTTTTTGCTTGCATCTTGGAATACGC AATAATTTTTGATAATTTCTGAAATACTGATATGATTGACTTGAAACTTT CCCAGTGTGAACAAAATATTGATTATAGCTTTTTGGCAAAACTTTGTTAT CAAATTATCATTGATGACGCTTGTTACAATATTATGTTATCATTTTTAAA AATACCAACAATGGGACCCCTGTAACTATTTTCACATGTGGGTATTTTTG CTCAAATTTCCTGTGGCAACCCCACTGAACCAGTTACTGACCAGTCTGTA AAATACGAACCATGTGAACGACTAACATGAAGTTTCGCCCATCGTCTTAG ATGGTTATGATTTATCACTTGTTAAAATCTGACAAATCAAAAGCTCTAGT AGTTCCTTTGTTCTGGGGCGTGGTCAACGTGTATTTTACAGATATGTCAG TAAAGACACCCCTGTGTCAAAGAGTTTTTATCCTGAGGAAAAAGGTTCCA CTGGGGCTGTGATGCAAGGGTGTTTTAAGTAACCAATACTTTGATATACC GTTTGTGAGTGTTGGAATTGCAATGTAATGTGTTCATTTTTACTGTCGCG ATCATTCTTTTTACTAGAAAGCTGAATCGTCAACATCAAGGAATAATGAT AATGAAACATCAAGAAATGAAACTGCAAGAAGTAAAACTACAAGGAAAAA TGAAACTGCAGAAATGGGAGTCGAAACCAATCAAGTTGAAGAAGAAATCG AAACAATTGAGACTTTGAATGATACAAGTGGTAAGCTACTCATTGTTCTT TAGAAAAGAAGATATAATAAATTAGCTAATATAAGTATAACTACAAGCCT TTTTCATGCTTTTTTTTATAACAATCAGTAAATTTTGGCTGAAACTCAGT TGTTCTTAATTTTTTTAAATTTTCAGGCTTAAATGTTCTTGAGCAAAATT TAGGTTACTCTAAAATTTTCTCAGAAAATTCTGAGGCTCAGCTTGTTCTT TAATAGACCTTATCGCATTTAGAAAAAAACGATGCATTGTGGGATTGTTA TGGAGGTATTACAATAGAAATCTCGAGGGAATTCTATTCCAGTTGGCACG CAACGTAGTTTTGACGCTAATTTAATGTTATATGGATGTTGCGAACGTTC GATGAACGTTGAAACAACGTTGTGTGCCAGCTGGGATTGTAATACTCCCA TAACAATCCCACAATCCATCGCTTTTTTCTAAATGCGATAACGTCTATCG GCCAATTTTCGCCTCGTTATTATTAAAAAATATAAACAAAAAGTGCGTAT TAAAATGCAAATCATAATCAATTGTAGCCTAGATACCCAAGCTCATAAAA TTATAGAGCTAGGTACCCCTAGAGAATGAAAACAATGAAAGTGCAAACCC ATGTTTCCAAAACATTCCTAGCAAACCCTGGGTAGTAAAAATCTAAATCC ATACTTAAAAAAGTCCAAAGTCCATAAAAAGTTTGTCTGTTAAAGGAAGA AATTTTGGCAGAAAGAAAATTTGGCGGATTTGGCGGTTTTGGCTGAAATC CACCAAATTAAGTTCCCGCCAAAATTTCTTTTTTCCGCCATCCGCCAAAT TAAATTCCCGCCAAATTAAACATTTTGAAAATATGATCTCTTTTANNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCCAAATTAAATTCCCGCCA AATTAAACATTTTGAAAATATGATCTCTTTTAAGGTGTTTTTGCTAATTT TTCGCTGTTTTGACGCCATCTTAAGGTTAATTTTTTAAGCGACCGTCAAA TTAAATTCCTGCCAAATTTAGTTTTTTCGTCCATCCGCCAATTAAATTCC CTCTGAAAAAACTTTTTTGGCCATCCGCCAAATTAAATTCCCGCCAAAAT TTCTTCCTTTAAGGTATCATGACCAACCGTGTTTTTTTTATTCCAGCTGA TTTAACACATAAACGCCGTTTGTCATTAAATGGTTGGCAAAAATACATGA GTGAAAACCTTGTAAGTAAACAACATTGACACATTTTTTTATTTTTTACC TTAATAACTACAGTTTTCCTTAAAACACTTAATAAGGATTACATAAATTG AAGTGAGGGGGTCCTTCATACACCCCTGTCAGACAGACCCGGGATCCAGT GGGGATGAAAATAACGGACTGAAACTCGATGGGGATTGATATTCCCATAT TTTATGAATGGGGATTTCAATTCTTTTGTTTTCAAATCAGAAAATTCAGT GGGGATGGGATATTTTTGCAGCGAGGATTGGTTTATTTGATTATTATCAT AATTGGAGGATAATTTCCCACCGGGGACGATATTTTGGACAATTTTTCCA GTGCGGAAAGGGTTCCCAGGGGGTGTCTTAATTTATCTTAGACTTCTAAC AAACATAGCAATATCTATTTTTTCAATCCTTCTTTTGATTGATCGAATTT ATTTGCATAGAAATTTTCATCTGATTTTACAGGAAAAATCATCTGATGAA TCTTTCGGGGAGATTGCTAAAAAAGCTAGAAAGTCGTGGAATTCACTTTC ATCTGAGGAAAGAAAGGTATCTCATTTGTTATCAACTGATTGTACTTCTT TTCTTGTCCACTTTTTCTTTTCAAATTTGCGGGTGATTTGCTTTTGTTTT TTAGTTAGCTAGGACGGGGACAGTAAAAAAAGCAATAACTTGTTTTTTCT TTTGTATTTAAGAATTACAATACAAAAGCGAGAGAGGGAAAAACGATACC ACCTTGTCATTTATGTGGGGCAGCATTCAACTACGCTAAACGACGAAAAG AACACATGAACATATGTCCAAAAACCTTTGCATGTACAAAATGTGAATTG ATATTCGAGTCACCACAGGCATTGAAAGCCCACGATAATAAACACAGTCA TAAGTTTATGTGTGATAAGCCAGAATGTGGAAAATGTTTTGAATGTGCTT CGAAATTAAGTCGCCATCAGAAAACACATGATAAATCCAAAGATATTATG TGTCCTGTCTGCAACAAAAAGTTTTCACGAAAGGACAACATGGTAAGACA CCAAAAAACAAAACACAAGTAATTTATTATCGCGAACATCTTGATGTTTA TAGGATTGCATTCATTTGCAAACATTCATTTTTACATACCATGTAAATTT TGTTTATATCATCG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00061226TCONS_00061226Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00061226-proteinTCONS_00061226-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_354supercontigscaffold_354:1203339..1210352 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.54 0.41 0.32 0.44 2.48 1.78 3.21 3.31 1.46 2.05 2.63 1.89 2.29 2.16 2.22 2.73 1.66 2.25 0.69 0.73 1.84 1.32 0.68 0.98 3 3.74 0.42 0.28 0.16 0.15