XLOC_040367 (gene) - C. hemisphaerica

Overview
NameXLOC_040367
Unique NameXLOC_040367
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_412:44097..53693-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_040367 ID=XLOC_040367|Name=XLOC_040367|organism=Clytia hemisphaerica|type=gene|length=9597bp|location=Sequence derived from alignment at scaffold_412:44097..53693- (Clytia hemisphaerica)
GTTTGAACTTGGTGCGAGTTGCGTTTTATCAGGAAATAAATTTTCTGTTC ACTGTTAGCACAACAACAAACACACAGGCAAGAAAAAAGTGACAAAACTA TTGACTATGGCTTGTTAAGATGAAATATTGCATTTTTAGACACAATCATT TATCATATGGCGACTGATGGCCGATATTGACATAATAGAGGATGCCTCCC CTTCTCAAGGAAGCAGCAGCAGCTCTTTTTCATATAAAACTCCTGATCCT ATCAAAATATGTGGTGTAGGGCATCTAACAATGTAAGCCATTTTTTGGAG CTTTTTTTTGGTGCTCTATTTTGTATTCAATACGATCAAAACTGTCTAGC TATTGTGTTTAAATATCTAGAAGATGTACCTTTGCTTTTCATAAGATTGT AACCCTACGGGTTGAGTGTGAGCGAGCAGAGAAATTGACGAATCACCACA ACACAAAGGTCTTCTTTTCCAGGGATTCCACTTTCTCTCTACCCAGATGG TGTCAATCGAACGAATCGAATGCCGAACCAATTGAACGCAATTGAACACA ATCGAATAATTGCGATTCGATTGTCGAACTCAATCGAATCGCAATCGAAT ATTACCCAGGATTTGCCGTTCGATTGCTTCGATTACGTTCGATTGTATTC GATTATGTTCCAGTACGTTCGATTGATTTAGATTTTATTCGCTTTCGTAC GATACTTAATAAGCGCTCGGCCGCCCACGCACGCTAAAAAGCTCTAACAG AGTGATCCAATTTAATTTAATCGCAATCAAACTCATCGAACATAATCGTA ATCGAACCAATGGAACATAGTCAACTACCGTCAACTGCTCTAACTTGGGA CTATCTGAAAAAACATGGGACGGCAATTCGGCCACCATTTCACCAAACCT CCAAAGTCATTTGATTTGAGTTAAGGTAAAACTTAATCCGAAAATTGATT TTGCCATGGATCAATGTGGAGTCAGATCACAAACAACGAAATTTTTGAGT TAAGGAACGGCGTATTAAAAAATATACGATTTCTCTTTCAATTTTACAGT AAGTGAAAATACAGACCAGATATGAAACAGTCCCATGTTTCGACCAATCA TCCCAAGTTAGAGCAGTTGACGGTATTAATCGAACCAATCTAACCTTACT CAAACGCAATTGAACACAATCAAATATTACCCAGGAATCAGCCGTTCGAT TGAGATTCGATTATGTTCGACAATCGAATCACAATTATTCTATCGCATTC GATTGCGTCCGATTGGTTCGATTGCAATTTTTGTTTGAAGCTGTTCGATT GACACCGTCTGGCTCTACCTAACATTCCATTTTCTAAAGGAAAAAGACCA AGGATAGTTGAAAATTGAAAATTGAAAAAATGAGCTTGAAAGTTAGGTAG TTTCGTAAGTAAACACAAGGTTTTTTTCTATCGTGTATCTTTAGGGAAAA AATACCCATTCCAATATGGTACAAAAGACCTTTTGCTAAGACCATCCATG GCGTATTGTATAATTAAAAAGTCTAGCATAAAAACAATGACACATTATTG CATACTGTCAACTGCTCTAACTTGGGACTATCTGACAAAACATGGGACAG AAATTTGGCCACCATTTCACCAACCTCCAAAGTCGTTAATTAACATACCG CGATTCATAGATAGCAAATAATGTGAATATACTACTCTCGCCAGGTAGGC TTTCGCACTGCAAAAGGAACAAATCTTTGCGACGAGAAACTTGTAAATAT GATCGGGCACGCGATTGTATAAAAAGTCTGTTCTTCCACAGAAAATTTGA AATCTGTTATCGACCACTCTGTAACTTTGACATGTCAATCAATAACACAC GCTGGAAAAAAGTCTCTAGAGAAAAACAACACAATGGCGTCAAGATGTGG TAGCGCGGGTGTGATTAAAATTGTTAGTTACTTCTTCAAATTATGTACTT TTAAAATCCTTTAAAAATACATTCGGTTGTGATTATGAGACGATGAACGT TTGATTGATAAACTTGGTTGAAGTATAAAAACAAACTTGTTGTCAAAGAG ATTTAAACAGTAAGTGAAATACAGTCCAGAAATAGACCGTCCCAAGATTT AACCAATCGTCCCAAGTTAGAGCAGTTGACGGTTCCAGCAGAAAGAGCTT GAAATGCTGATGAAAATTGAGGCATAAAATATTCCTTGAAAATCTTCCTA TCAAAAGTTATAGAGTTTGAAAGTTTTGTGATGACATCATCACAAGCCTT TCCAGGCAAAATTTAAAAACCTTGTAATTTTGGAACAAATTGACCAAATT TGATGTTGCCAAACAACCAACAAGACAACAGAACATTTAACTAGGTACCA AAAAAGACCAGAACTGTCTCATTTCCAACATTGTATATAAGACAACTCTC AATTGGACTTACCCAACTACGAAGAAAAGAAATATATAGGGCTCTGCAAG TCCACCTTCAAAAAGTGATTCAATGGGCATAAAACATTATCCACAGAGGT TTGGCGAGTGAAAGATAGCAGAGGAACACCATTAGTCAAGTGGTGTGTGT TGAGAAAGTCGAAATCTTTTAACCTGATTCAGGACATTATGTGCTTTGCA AGACCAAGAAATTTGAAATTGTCAATTACCCTGAAAAAAATCTTTTAAAA ATAAACGTTTTGAAATCATAGTGAAATGTCGCCATCGTCATAAATTCAAT CTTTAACTCATTGACGGAAAAATTGACGTCATATAATAAGATGATATTGC AGGGCTCGAAATAACGGTCGGACATCGGACATTGTCCGACCCAAATTGCT CCTTGTCCGACCCAAAAATCATAATTTTCAAGCTAAAGGAACCCTGATCG GACATTTTGTCCGACCCACTTGAAATCGTTATTTCGAGCCTTGATATTGA ATTGTTTTTTCACAACAAAATAGATAATGTAAGGTATATTTTTTAGTTGC CTGAAGATTTTCACCAAAGTGACATGAAACTGCCAATAGCAGAATAAAAA AGTATCTTTTCTTCATGACAGACAAAATTTATATTATGCTCAGTTCCATA TACCAAAAGAGATCCAAAATTGGAACTGCCACTAATTTTTTCATTGTTAA AAAATTGGTGGCTCTGACCCTATTAACCTTAAAAAGAAATATTGAAAATG TTGGATAAAACTTGACAATTTTTAGGGACTTGTTCTTGTTTTAGAAATAC TGAAGTTTAGTCCAGTATGGTGTCGTGGAAGTTGAAATATAGTATAAACC ATTGAATGAGTTAATTAACAGCTAAATATATGTTCGATAAAAATCAAGAA AACAAAAATTTGTTCAATTTATTGTAAAAGCTTTTCGACTATTGTCATCG TCAGTACAGTAAAAAATACATAAGCATATGAAAAAGTATCTACAATTTAT AAAGAAATGTTAAAAAGTTGAGAAAACACATCAATTGTCACGGGAGCAAC GATGCCATGACGATTAATGTGTTTTCTTTTGTTCCAGAGTAAAATAATTT ACGTTATGCCGTTTCTAAATAAGTTTAATTGCNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCAATTAAACTTA TTTAGAAACGGCATAACGTAAATTATTTTACTCTGGAACAAAAGAAAACA CATTAATCGTCATGGCATCGTTGCTCCCGTGACAATTGATGTGTTTTCTC AACTTTTTAACATTTCTTTATAAATTGTAGATACTTTTTCATATGCTTAT GTATTTTTTACTGTACTGACGATGACAATAGTCGAAAAGCTTTTACAATA AATTGAACAAATTTTTGTTTTCTTGATTTTTATCGAACATTACTTTGCAT GGCATTAATCATTCATCAAGCTAAATATACTTTGGCTGAAAAGGATGGTA TGAATAAGAACCATCTTACCTAAATATTATAAAATCTTTCCGCTTTTCAG GTTTGGCATGACAAACAAATTTGATACTGATTTCCCATCCGGGTTGACAG GGAAACTTGCACCAGAGGAATTTGAATCCACACTAGTGAGAATAAACAAA GTGTTGGGTAGAAGTTTGCCAATGAACTTGCGATGGTTGTTGTGTGGCTG TATATGTTGTTGTTGTACAATGGGAATGTCCATGTGGCCTGTCCTCTTCT TGAGCAAAAGGGTAAATTATTCTTCGCTTTCAATAAGCATTATGTAATGA ACTTTCAAATATTTTGCTGTTTTCAAGAAAGGTGTGCGTACAAAATTGTT TCTGTCTGATAGGGTAAACCATAGGAATGTATTAATAATGTCCTTTATGT TCAATGATCTTCGATCAGAAAAAGTCAACAATATGGTGAATATAATTCAT TGGCACTCCACTCATATTTTACCTTTGAACTAACCGATCTAGTTTGGCAG TATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNTATCCGACATAGTTGAAAGCTGGTTGGTCGATTTTGCATTCGTTTC GTGTGCGTTTTGTTTTGGTTGATTTGTTGATGAAGTCTTTCAATAACGGT GAAGTCAAGTTGTTGTAGATTTTATAAGTTTTGCATGTAAGATGTTACTT ATAGTAGAAAGCAAGAGGCTTCCACTTTGCTTGAGCGAGAACTTCACAGT CTTTTACTTTTTTCTTGACTCGTTCGATGAAACGAGCAGCTTTAATGTGG ATCTTTTCTATATCGTCCAGTAGGTGACCAGCACAATTCCCCCAGATCAA GATACCATATATTACTGATGGTAAAATACCGCTATTATAGATTGTTCTAA GCGTAACTTTATCAAGAGTGTTCATTTTGTAAAGGTTTTTAAGTTTGTTG CTAAAGGCATTACACACCATTTCCGTATGAGGGCCCCATGATAGTTTATT GTCAAGAATCACACCAAGACATTTTGTTTTGTCAGTTATTTTGATAGAAT TGTTGTTGGTCTTAACATCTGGTAGGGGACCAATGAACTTCTGTTTGCTT AATATCAATATTTGACATTTATCTGGATGGATTGAAAGACAGTTCTCTAA CGAATAATTAGCAATTAGTTCTATTTGTTTTTGCAAGTTAATCATTACTT CGTCAACAGTGTCAGCTATCGAGTAAGTCTCAGAGTCATCTGNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNTATTCCTACAACCTTTTTGTCATCTAAGGCTTTATACCATG TTTCAGTCAAGTATAATAGTAGATCTTCAGTTGATCTAGCTGCTCTAAAA CCCCATTGGTGTTCATTTAACAAATTAAATGTGACAAGATGATCATTTAG CTGAGAGCAGATAAATTTCTCAACTACTTTGCTTGGTATGCTGAGTAAAG AAACAGGTCTATAGTTTGAACAATCCCTTTTTGAGCCCTTTTTGAATACA CATGAGACTCTAGCTATTTTCCAGTTGTTAGGAAATTTCCCAGTTTGAAC ACCTTGTTTCAAAACTTGAAACAGACCCGTAGTTGACGCTGATTCGTTAA TTTTTAAATCTTCAGCAGTAATCATATCAAGCCCACACGCTTTTGCAAGG TTGACAGCTTTAGTAAAGGATTTTTCAAATAATTTGAAATCGAGCTTCAC ATCGGAGAGGGCTGGGGTAACTTTGTATATTTGCTTATGTGATGCAGTAG TGTGATCCTCTCCAATATCAAGAGCTAATTTCTTACCAACATTTGCGAAG AAACTGTTCAGGAGTTCCGCTTTTTCTTTGTCGTCAGTTATGATTCGCTT GTTGTCAGCTAGGGGTCCAATAGTACATTTGTTGGTGTCTCCATTGAACT TTTTTACTGTTTTCCAGAAGCTCTTGGAATTATTAGATTTGTCGAATTCA TTTCTCCAGTACTTTGCTTTTGCTGCTTTGATTGCATTTGTACACCCGTT TCTTGATTGTTTATATAGTTTCCATTCGGGTGATCCTTTAGGAGTGCCAT TTGCGTTCTTGAATAGTTTGTAACGGTTGTTTAATAATTTTCTAATTTTT CCCGTCATCCAAGGTTCATTTTTGGAACGCACCTTGACTTTTCGTGTTTG GACGTGTTCGTTAATAACGCCATTAAAAAGTTCTTCCCAGGCCCATAGAG AGTCGTCAACATCATCGAATATAGAGACAATGTCCCATGGAACCTGCGAT AAGTCTTGTTTCAGTTTATTTTGATCGGCATTTTTGTAATCTTTAACTGT TCTTAATTTTGGTGGTGGACGGTCAATAAAGTAGTTCATAGTTACGTATA TCAGGTTATGATCAGAGATGGCTGATCCATAACTTCCACTTCGAAGGATC TTGGTGTCGTTCACAGGTATTATAGCCAAGTCAATCAATGTTTTAGAGTT CTCTGTAATACGAGTGTAATCTTTTATAACATTCTGTAAAGCAACTTTCG CCAAGCCTCGATGAAGCTGAGGTGTAAGATAAGCATCATCTTTAGCAAGA TCAATGTTCAAATCTCCAAGTAAAACGATATTTGACCTGTGCGAGTACTT TTCAAGAATTGGTGTCAAATTGTTCAGAAACTTCTTATCATCAGGTGGGT GGTAAATACATCCAACTAAAATTGTTTGTGATTTTATAATAATTTCTGCC CATACTGACTCGATGGCTTTCATATGTTTATCATAGTCTAATTCATAAAT GTTAATATGCTTTTTATGATAAAAAGTGATGGGAATGTATGTCCTTTATG TCCAATGATCTTCGATCAGAAAAAGTCAACAATATGGTGAATATAATTCA TTGGCACTCTACTCATATTTTACCTTTGAACTAACCGATCTAGTTTGGCA GTATATGATAGTTCTCCTTCTGTTCTTTTAGACGAGGCATACTTTAGAGA AGATCATTGACCACGAAAATCAAACACTTTATCACAAGGTAAGAAGTATA AACCACCAAAAAGGTCTTTGTTAGGGTTTTTAGGGGAGTAACCGTGAAGA TGCTATTGAATCTACCACCAGGATGTCTTTGAGTTAATTTTCTTTTACTA GCTAGAATATGGTCATGTGTCCTTTCTTTTTAGGAAACTTGCTGTAAATA TTCAGCCTCGTTGATTGATTTGATCTTTTCTTTTTTTCAGCTGAGTTTGC ACTTGAAGCTCCAAAAACAGATGATTACATCGAGTAACATGATGGAATAT GTAAGACATTTACCAAATCTTCTTCAAACATTTGTTTTTCTACCTTTTTC ATTTCCTATTTTCCTCTCATATCCATTTAAGTAGTATAAACTCTTATTTA TTTTTTTGTTTTTTTGGTTGTTTTTCTTTTGGGGAGCTTCTAACAGGTCA ACAAAATGCTTTCCCAATCTGCACAGGTATAAAAAGAATTTATTGTGTTT TGAAATTCTTCAATGCATCTTTGTTTTTTAGATTTTATTGATGGAGTTTC GTCCCAAACAACCGATCTACAAGCCCGATTGATTAAGCTGATTTTTATAG ATAGATATTTAAATTATTGTTATCTTAAGGGAAGAAATTTTGACGAAAAT TTGCCTCCAAATTCGCCCTAAAATTCGTCTTTCAAAATAACTGGTCAAAA GATATTTTCTTGACAAATTGAACAATTTTATTGATTCACCAAAGTAACTT ATGCCAAATTGCACGAAAATTGCTCGTTATAATTCGTTCTCGCCAAAATT TCTTGTTTTAAGGTATTGTCATATATTTAGTTCTTTACAATGCATTTCAT ACTTCTATTTTTCGAAAAAAACCTTTCGGGTTTATTGGGACGATAGTAAG TGTTACGTGATAATATTCCACGACTGACACTACAAACCTCTTTTATTTGT TATTGCGTAATCAATACAAGACAGTCGGTCATTCTGGTCCAGACGGTATT ATAGCTTACTAGTATTGGAATTCATTAATTCAATTAAAAAATTTCATGTT AATTTTCATAGAAACAAGCAATGCCAATACTTTTTTTAGGTTAAGGAATT TCTTGCCATATCTATTAAGTAGAAGTCAAGACTAAGCTGAGAATTGAGGA AGTTAGGGATGCCTTTTCTGTTAATGTGCGAGAAGAAAGATTTCACGCTA TTTACCTGCTGTAACGCTTTGAAGGTAGGATATTAACGGTCAAAACCTTT GTAAATATTTTTTTTAGATATTATATAAACGGAAATTTATCATAAAATAT TTCTTTTTTATTCTAGAGTAATTCCAAGTTACCTTTTAAGAGTGGCGAGA GGTTGAGACGCCTTGAAATTAGGAATGCTTTCGTGAACCGAGCCTGCCTT ATTACTCTTGAGAAATTTAATTTGAAGCCGGCTCTTTTTGGTAACTTCTA ATTCTGGATTAATAATTTTTGTTTATTTATTTGGTACAGTATTTCATGCT GGAAATTTTTAGTATACTGATTTTTTTGTGTTTCCATGCAAAGAGAATTT TCATCAAACGAAAGAATGAATGAACACTTCCTCTTGGATCACTTTTGTCA TAACATCTAATCCTTGATGTCGTCATTAAATAAACTTTTGACGAAAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00064382TCONS_00064382Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00064382-proteinTCONS_00064382-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_412supercontigscaffold_412:44097..53693 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
CHIC1cysteine-rich hydrophobic domain-containing protein 1 isoform 1 Homo Sapiens
CHIC2cysteine-rich hydrophobic domain-containing protein 2 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
51.73 53.34 40.75 39.01 66.58 53.28 43.06 48.22 37.86 36.25 34.92 31.81 32.4 28.54 22.54 22.59 29.41 31.09 23.89 31.66 32.11 28.29 51.24 50.61 36.43 38.05 72.28 57.8 61.49 71.3