XLOC_041092 (gene) - C. hemisphaerica

Overview
NameXLOC_041092
Unique NameXLOC_041092
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_440:452654..456339+

Legend: transcript
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_041092 ID=XLOC_041092|Name=XLOC_041092|organism=Clytia hemisphaerica|type=gene|length=3686bp|location=Sequence derived from alignment at scaffold_440:452654..456339+ (Clytia hemisphaerica)
ATTGAATGACATTGATATTCTGATGCAGAGAAGTAATCAACAGAAAAATG
GGTGGACATTTCTTAAACgaggaaaatgaagaaaaagctGCAAAGatttt
attatcaaaagaaTATGATGGAAGTAACAAGTCTGGAAAAGTAagccatt
tttttaaaatttaaattcaaactGCTACTACTAAGAACTCCTGATTTGGA
GATTGCACTACCTTTGTCAATCGACCAGGATATTAGAAAAGATATTAGTT
AGAAAATGGGCTTAAAGATTGACTTCTTTAAGAAGTTTTTGgctaaaatg
tttgaaaatatgACCCTGAATAAAATCCTAAATTTCCGTTAGATTTTCTA
ACCCTCTAAGACTTTACCGAAAAGGGTACCCAGCGAAGAACTGGTTTTAC
CTTTTTGGTTTTGTGAGTCCTCCTTGGATGTttactatgctatagtctaa
gacaaatcactatctaagaaataagcccaaagccgaagaaaattcgcaaa
ggggatatttttgccaaaaagagtttacagtcgatAGAGTTTGCAAGTTT
CTCTCCCACCGATTTTTTCTCCATATACCGCCATAACgtcataccgccat
attttcctgCCTTTACTACACTGTAACAGAAGATAACATTGTCTACTTTG
TCTACTTTGGATGACACATTTCCACCTCTTTCATTACCTACAGACTTGAA
CCCAATCCCCTTAGTTTGTTCTTTAAGATTCCGATATCGCCCAAGAAATT
ATTGTACCTAAATacgcccagctggcacacaacgttgtttcaacgttaat
ataacgttatatggacgttgtgaacgttagataagcgttgaaacaacgtt
gtgtgcctgctgggcgtccatcagtaaaatcaaaagtggTGCAAAAgact
ctgggtacgagattgttattgggcttttccagaaaaaaaccgtatacccc
ctgttgaggaggtctatCATTTTGTAGCTGGAAATGAcgtaaccccctgg
aatttcCAGGCAATTCCAGgattaaacccctctggaattctgaatttcag
taggatttaaaaggctacccccatggaattccagttatttttgacagata
tggaaatggacctcctcaacaggggtatacggtttttttctggaaaagcc
cattgccTGGCTACCCAAACTGGAAATCACCACCATCAACAATACAGTAC
TTGCAGTAGTGAAACGTTTTCTCTATATCTATTTTTTTTCGTTACAGTGT
ACGAAGTATTGCAGTAAATTACCATATCTTCTTTTGTATACTTTCATCTT
TCTATTGGGATTTATCGCTGGTCTGACTCTTCCATTAACACAACATTTAC
AAACAAGTTTGATAGGTGAGTATCTCAATAATGTATTGTACAGTAGAGCC
TCTACATTGCCTCTTACGGCTAACAACCCCAAAAGTTCGTTCAttaatca
aatgaaaaaaattccgctgaaattgtaaatttccaaataattcGAGAGAG
AGAGAGGAATCGAGCTGACCAACTAAAAAAGCTCCACAAAAACTGTTTTG
TGAATTACAAGCCAAATTTGTTTGTACTGCCTATTCCTGTTATTTTAAGC
AAATAGCTGGCGGAAAGTAGGCTGTTAAatgttaaaatgttaaaaagata
tATAAAGTTTTGCAGTTACTTTAGACACCCAACTTTTTACCCACTTTCAT
AAAAGGTAAACACAATGAATGCTAGTttttttcattgtctttttttttca
gataaaaagatTCAAAAGTTAGAGTTGATCGTTGAAAGATTCGAATCGAA
AGGTAATTTTGCTATAATTCCACCGAAGTacctatttttttctattttat
aatTTCTCGTGTGTTTCTTTCCTGAATCTTTAGTTTTACCTGCAAAAGTA
CCCTACTGTAAattacactttcgttttcttgtgTTAGAAAATTTACAGGT
TTATAGGATTCCCGATACTGATTTACACTTCTGTACCACAAAAAGAAGAA
ATCCTTACTCATTGAAATAAAGATCATCGATCCAGGGCTTTTACTATCCC
AGCTGGCAAGGGGCTGGCACACTACGTTCTTTCAACGTCAATTTAATGTT
CAAAACGTcctccatttaacgttagatgaacgttgaagcaACAGCTGGGA
TAGATAAGACATAGGACAATCTGGGAGAAAACAATTTCAAACCAACAAGT
ccatttatataaaaattttagaCTGTATATTCTTTTTTATCCGCCATAGT
TTCCTCCATCAGTAACAACTCACTGACATTCAAGAATCAGATAATGGATG
CTTTGACTGAGGCTATTTCAACCAGAAATAATCGGTCAATAAAGCAACAG
TATTTAGCCCGATCTCAAGACAATCTATTAAAGAAATCTATCACAAAAAC
TTTATCGACACAGCATGCTTCAACAACAAAAGCTGCAACCACTACAACAA
TGGCTTTCACACCAACTCCAAGCCAAGATAAAACTGGTAAACTTTACTAG
TAACGCACACATGCATAGTATATTACTGTGCTACTTTTACGCGTAATACA
TCGTAATTTCTTTTGTTACTTCTATTACAGTATATATGATTAAGGATGCT
GCATTGGACTCCAAATCCCGGGGGGGCAGTCAgacaaattgaccgacggg
tatgtgcggcggttaagggtatgtttttcaaaatatcagaaatgcactgt
aaaggtggacttttgataaatgcactgtaagggtggaaatttcagcaaat
ctgggaaaaattgcaaatttctGCTCGAAAATGTAGATTttttttgctct
aaaagagtttaaaatttgaaaaaatgcactgtaagggtatgaatttcacc
gatttttttctgcactgtaagggtgcgattttaaaagccatttttttcgc
cgcacataccgtcagttggtaaacccactgccccccctgGGCTCCAAATA
CCCTGGTACCCAGAAGCCTTTTGGGGATATTGACTTTATTGTCACTTATT
TCCTTGAGAATCTGGGTAGATGTTGGGTTATCATTCCAGCCACTTTATTC
AATATCCAATGTCATACATCTGATCTATTTTCAGTCGCCGGCCCCGACAA
CGTGGACATCCATCTATCATGTCCTCTCTTCTACAACATCAACATCAAAT
CAGTGTATTATCAAAACGTGCAAGCCAGTAGCGATTCTCTCAAACGTCTT
CAAAATGTATGCAATGATTCTACTCTTATTTCTGGCAATCGTACCAAATG
TGCTGTCAGCTTGTTGAAAGCTTATGGTTCATCTTTTGGTGGAACTATGA
AAGTGATGTATAATTGTATTCCAGGTCTTTGACTTTGAGATGACTTCTCA
ATAAGAATATTGAAgtaaaaagtattttgaaaattgaattcaaatataca
aaaaaaacaaaactatcATGCAATATGTTACAGCCTCCGAAGGAGAACTT
TCAGAATGAAGTAAAGTAACAACCCCGTCTCACGAACTAGATTAGACCCC
CAACTCACTCAAATCATTTCAAAAGAAACAGTTTTGGGAATAACTAAAGG
ACATCAGTCTTTTCGTTCACATTGAATTTGACCTTTTCATTTTATTCGAT
ATTCGATATTCGatttattattatatatttaaaaataaaacagcGACTGG
GGTTATTCTCAAGATCTAAATCCATTTTAATAAAGC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00065582TCONS_00065582Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_440supercontigscaffold_440:452654..456339 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.08	0.04	0.09	0	0.15	0.12	0.83	0.64	1.21	1.06	0.92	1.03	1.91	1.57	0.04	0.02	1.76	1.57	2.89	5.17	3.43	2.57	0.87	2.13	1.95	2.93	0.98	0.33	0.04	0