XLOC_041170 (gene) - C. hemisphaerica

Overview
NameXLOC_041170
Unique NameXLOC_041170
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_443:112486..117170-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_041170 ID=XLOC_041170|Name=XLOC_041170|organism=Clytia hemisphaerica|type=gene|length=4685bp|location=Sequence derived from alignment at scaffold_443:112486..117170- (Clytia hemisphaerica)
CAAGTTTGCAGACTGACAAATCTTTCTCTGGGTTTCTTCACTCAACCAAC CAACACACATCTTCGCACAGCAAATTTTTTGTTTTGTTTACTTTCACACA AACAAATTTTGTTTACTTTCACACAAACATAACAAATATGAGAAACACAA GCGCCGCACAAAACAAAAAAACATTGGTTATCCCTTCCGGCTTTCAAGCC ATGTTGGAAGCATTGGCTCGCGACGTCCTTATTCAGCAACCGGCCGACGT CGAAGAATTTGCTGCGACTTTCTTCAGGTAGATTTATGATTTTTATTATC TCCTTATCTTTCTTTTTATCTACATTGATTAGATTTTGAGCTGCTTGAAT AAAAATTACGTTATTTACCGCAGCATTGTTGCACAACAGATGCTGTTGTA TATTTGTCATTATCTTGGTTTCTGCACAGGCACCTAAGGCTAAGATTCCC ACTCGCAGCGGTTCACTTGACAAGTAAACCAACCTTCGTCAGGGACAACT CATGCTATGTGAGGGGAATCGGGTAGCCAGTTCAAGATGCTGAAGGGGCG CTCTTGGGAAGTGTCTATAGTTTCAAAAATGGGCCTCAGAGTCTCCTGCA ATTCAACCAAATAGAAATTGAAATAGAAGCATAGAAAGGCTTTAACCGAC GTTTGCTTTATAGTACTAATCTTACTTCTTAGCATTCAAATTCTACCAAA CTCATAAACAATCATAACTTTAATCTCTTAGTCTTAAGTCTTACACTTTC CAAGCTTGTACACACTTATCACCCCTTTTCTTTTAAGCCCTTTGATTTTA ATATTTATCAATTATTTTATTAAACAATCTTGTATTTTATATGTAGCGAA AATTTGGCCTTCGGGCCTGATGTTACTTAAATATATAGATAGATAGATTA TACATAGCTATAGTTTGATCTTCTTGATACATGTATAAACCCAGAAAACC CAGGTAGACCAAAGCTTTCCCGACTAATGAAATAATGATCAAAGCAGATT TATTCTACCAGTTTAAGACTTTAGCCCCTCCATCATGTTCGTGTCCACTT TTTACAAGTTATGTGCCTAATGTTGTTGTGCTTTTTGGCCCAGCGTAGCG AAAAGGGCCTTTCAAATAGAAGTGTCTGTGGTTTGTGGTTTGTGGTTCGG TTCGCCAAAAGTTTGCGATAACAGCGTCTTGTTTTTTTTTCAATTTCATA ACTCTTGATAGACGGTGATATACTCTTTCGGTAATGGTTCTTTCAAAGTA AACAAGGGACGGCGCACAATATGAGCATATTTATTTTTCTTATAAGCATA TACTTTATAAGAATCAAATCAATAACTCTTGATAGACGTTGCANNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGCATTAACTT ATGATAGACGTTGCAATGGCTTTTAAATAACCTTCAGTGAATTTACTGAA TTTATGAATACTGTCATGACCAATTTTGTTAATTTCAAACCTTTCTATAA GAGTCTAACTTCCTCGGTGATTTTAGTTTTCAACCTCATCAAGGACAGCC TCTTCTTCTGCCTACATATTCATAATTTTAAGTTGCTGGGCCTTCACGCC CCACGGGCTTCTTGTTATGTCTATTGATCACCTGGGGGCAAGGTTTTAAA CCCTTGTACTTTTAGAATTAAAAATGTGTTTATTTCTTTGTTAGTAATTT GTTAATGTCTCATTTCTTTTTTTTTATTTGTTTCTTTGTTTATTTTGTTT GGTTGATTGTTTATTTATTTTCTTTATTGTCATTGCTGTTGTTTTCTTTA TCTCGTCTTTGTTCTTTGCTGGTCCTATGTTTGTGTTTTTTCTTACAGTT GATTCTGTCTAGTTCGATATTTAGAAGGGACCAATGATTTTCTTCGAACT AGCGAAAGGTTCGAAAAGCTTTTTGACTCTCTTTCCATCTAACAAATAGG GATGCACCAATAGGGCATGGAAATCTCTTATTTTGGATAATCCAAGGCCT TTTTTGATAATAAACCTTAAATTTCTGTAAATTTTAGGCTATCAACTCAC AAACATTTTTTACTTCTGCCGGGGTTGCGACACCAATAATATTTTCATAT TTTTGTGCTTCCGACAGGAGTGGAAAACAAGTATAGTGACTGCTATCTGA CTATTACGGAGCTTCTTTCTTTCCGTTACATATATAAAAGCAAAAAATTA ACTTTGGGAACGCAGTCAGAAGTGAAACAAAGGATCCTTAACTATCTAAC TGCTGGTAGGGGAGGGAGGGGACACTCTTTAACACTAGATTTATGGAGCC ACTCTTTAATGAATGCAGTGACAAACTAACATTTTCATTCATTTTCGATC TATCTTGATATGTTTCTATCTTCTCTTTTCTTTTAATTTGGAAAGATTAT GCTATAGATTATACCTATACTTTTTAAAGTCTAATGCTCAAGGTTTTGCA CATTATAACCGTGTATGTTGATAGAATAAACTACTCTCCTGCACGGTTAC TTCTTTTAATAACATATGATTTATGTAACTAGCCATATAAAAACCTTGTT CAATCAAAAATTCACTGATACTTGTTTTATCATTTCAGTCAACGCGTTCA GTCACGATGCTGTAAGGGACCATCTGCTACCTGCGACAAGACCTCTCCTT CATGTACACGCACAGCCACAGCTGAGACTACCAACAGTCAAAAATCGGTC GAAACTTATAATGCTCCCGCGACATCCATCGTTAAGATGCAAGACTTTGA GTCCGATCTAGCTGAAATGGCTACTAAAGACTCGGGATGTTGTCCCTGTG CTGGTCAATCAGCGGCGTCCCCACCTTGTCAATCAGCAGCCGGAAGTGTT GCTTCGGAAGTATCAACAACATGTGCTTCTAAGAAAAAGTCATCCGTTGC TGCGGCGCTTATCGAGGCACCTTCTAAAAAAGATTCGGTTGCCGTGAAAA AGTCATCCATTCAGGTAGCGAAGAAACAAAGTAGCGTTGCTGCTGCTAAA AAATCTTCAATCAAGACTGAGCGTAAATCAAGCACAAAAGCTCGTGTACT AAGCGGCACTGCTACTCGATCCACCGCTTCTGTTGAGAAACAAGCGAGTC CTGCTGCATCTAAGACCACTACCAAGGTGAGCCAAGCTAAGGTTACGTCG TCAGTTTGTTCGCGTAAGAGCTCCGTAATGGCGAAAACTGCTTCCGTACA GTCCCGTAAATCAGACATCACGTCTGCACGCAGCAAAGCCTCGACTGTAA GTCGAAAGCAACCACCCACGCCAAATACAAGCGTCCAATCAGTCCGTTCA GTCAAGGATAAGATGTCCGCCCAAGACACCGCCCAGCTTCTCGCAAAGGC ATCTAGCCGACTAGTAGAAGATGCTTTGAAAAATGTGTCATCCAAAACTC AAGAGGAATGTAAATTTGAAGAGGATGCTGTAATCGTTGAAGCAGACATC TCGTGCCCTCAGATTGTTGCAAAGACTTCAGCCCTTGCTGAGAGTCCTGC CACAGAAGCAACCCACACTGAGGTCCCTGAACCAGTTACCGACAGCCAAG AGCAGGCCATCGAACCTAAGGAAGCTACACAAGAGGCTTCTCCTGAACCA GCTGCAGATGGCCAAGAGCTTGCCAAACCAATTGAAGCTAAGACCGAATC TGCCGCCGCTGTTTCTACTGAACCAGCTAAAATGACTTCCTCAGCACAAG CTGTTGAAACTACACAAGATTCACCTACCGAAGCCAGCCAAGTGTCTGAA TCTGTTCCTGAGCCTGCTGCTGAAACTGTCTCAGCTGAGGCTGAACCTAA AGTCGTTGAGGCTACTGAACCCGATTCTGAGGCTTCCTCAGAGCCAGCAG CTCCTGCTGAAACTACTGAAGCAGCCCCTGAACCCCAAGAAGCAAGCCAA GAGACTGCTATTGAATCAGAAGCCAATGCTGAATCTAACCCCTCAGTACC AGCTTCTGCTGAAGTCAGTCAGGAACAACAAGCTGACGGTACCCAGGCCG ATAAGCCATCTGAGACTCCCGTGGCTCAAGAGGAACCAGCCGATGAATCG GTTCCCGAATCCACCCAAGAACCGACTGCTGAGAATGTAGAAGCCCCATT AGAAACATCAGTGGAAGCTTCCCAAGAACCAGCAGCTAACTCTGAACCAT CCACTGATGGTGTACCTGAAACCTCTGGTGATGTTGAAGAGTCTGTATTA GAAACAGTGGGGGCCATCCCTGCTGAAGCTACTCAAGAACCATCTGCTTC TGAACCAGCTGCCGCCCCATCCATACAGGAGGCTTCTCCTGAACTGGCTA CTGACGGTCAAGAGCAAGCTTCTGCCCCTGTTGAAGCTACCAAGGAACCA TTTGCACAGGAAGCTGCCCAAGAGCCAACTGCCCCGCAACCCTCCCCTGA ATCAGAGGCTACTGAAGCTAACCAAGAACCAGAAGCTACTGCTGAAGCCA GTCAGGAGCAACTAGCTGATGCTAACCAGGCTGATACCCCACCTGAGACC GCTCAAGTGACAACTGAAGCTGCCTCGCAAGAACCAGCCCCTGTCAGTGC TGGATCAGCATAAATCGCCCCCCCCCAGAACCCTTTGTACTTTAAAGATT TGAATCATTTGAAGAAATATAAACAGAAAGAAAAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00065714TCONS_00065714Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00065714-proteinTCONS_00065714-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_443supercontigscaffold_443:112486..117170 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
FSCBfibrous sheath CABYR-binding protein Homo Sapiens
NACAnascent polypeptide-associated complex subunit alpha isoform a Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.44 0.47 0.78 0.5 0.29 0.39 0.24 0.44 0.31 0.37 0.17 0.19 0.46 0.56 0.4 0.79 0.43 0.49 0.57 0.5 0.19 0.47 0.12 0.24 4.45 5.66 0.35 0.27 0.24 0.13