XLOC_041227 (gene) - C. hemisphaerica

Overview
NameXLOC_041227
Unique NameXLOC_041227
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_445:155405..158755+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_041227 ID=XLOC_041227|Name=XLOC_041227|organism=Clytia hemisphaerica|type=gene|length=3351bp|location=Sequence derived from alignment at scaffold_445:155405..158755+ (Clytia hemisphaerica)
CGCGCCTGTTGGCATCAAAATTTCGTCTTTCATATATCATATTGTAGAAA
CATTTTTCGATGGCATTTCATCGGGCCATAACAAACGATGTGGATATCTT
CTGCAAGTACAAAGAACGAGGCTGTCTTTGGACTGGCTCCATAAATGATT
TTGAGGTGAGTGTTCTTTAAAGTTTAACAAATAATTAGATGGTTTTAGAT
ATTTGGCTTGTAGACACCTTCTATAGTCCCAGTAAAAACTCCaaccattt
ttttctaaatatggGCTTtcacgttgaaattctattgttttctcgCAAAG
TCCAAAAATGTGTTATGGTATACTAAAACATCTCGACTTGGGAAAATATT
CTGAGAAAATGTTTTGGAGCTTTGTTCAGAACGATAAAAGGAATCCAAAT
GGAAAGTATTTTTCACTTATTTTGGCGCTTGCAAACCAGTACTCTCTCGT
TAAATGTTTTAGAAGCATGAGAAATTGAATTGCCAATTTACAACAATCAA
GTGTTCCTTTCAACAATGTAACATGACATTTTGGAGAAAATTCCAACCCA
ACCATGAGAAGATTTGTCAATATCGTCTAGCTCATTGTGATTACTGCaaa
aataaagatcttcgttttGTTGACTTAGAGGTACGCGTGTTTTTCATCCA
TTTAATAATACTTAACTCTTAAGAGAAGTGCTTAAGAAAGAAATCGTAAT
CAAATCTAGCATCATTAAGTAAGATACGGCCTCGTGTGGTTTTTATTATG
TAACCCAAGGGAAAAACTAGGTCGCAAAATGTTTCGTCGGAAGAAACGCT
TGGCCATTTTTGTGTGAAAACTTTACGGCCATCCTTGAAGTTGACCAGAA
AAGATTTACATCGAGAAAAACTTTTCCCGTCACTTTTCCTCGACTCATTT
AAggtcttttggaaaaaaacagACGGATAACGAGAACAAATAAAATCTAC
AAATGATTTGGTATACTGTTTTATCTCATATGAGCTTTTTCAGTAAATAC
CGATATTGTTTTTTTGTAGGCTCATCATGTTGTATGCGATCAATTTCCAT
CGGGTTGTGGAAATATTGGCTGCCACGTTATCTTACCAAGGGAAAAGGTA
CATTTGATTCGTTCCTTGATtcaacgttctactattcgatacgctccaat
TCGTTGCCATTGAAAGTCACAGTCAattctcataaacgacgctctactat
tcgatacgttcCCTTATTcatcttgaaaatcgaattagagaacgtctATA
TCTATCAAAAAAGCAACTCTAACACGATAGGGAATTTGGGCCCCTTCCGG
AACGTCTATATCTATCAAACAAGCAACTCTAACACAATAGGGAATCGGGG
CCCCTTCCGGAACGTCTATATCTACCAAACAAGCAACTCTAACACAATAG
GGAATTTGGGCCCCTTCCGGAACGTCTATATCTATCAAACAAGCAACTCT
AACACAATAGGGAATTTGGGCCCCTTCCGAAACGTCTATATCTATCAAAC
AAGCAACTCTAACACAATAGGGAATTTGGGCCCCTTCCGGAACGTCGATA
TCTATCAAACAAGCAACTCTAACACGATAGGGAATTTGGGCCCCTTCCGG
AACGTCTATATCTACCAAACAAGCAACTCTAACACGATAGGGAATTTGGG
CCCCTTCCGGAACGTCTATATCTATCAAACAAGCAACTCTAACACGATAG
GGAATTTGGGCCCCTTCCGGAACGTCTATATCTACCAAACAAGCAACTCT
AACACGATAGGGAATTTGGGCCCCTTCCGGAACGTCTATATCTATCAAAC
AAGCAACTCTAACACGATAGGGAATTTGGGCCCCTTCCGGAACGTCTATA
TCTACCAAACAAGCAACTCTAACACGATAGGGAATTTGGGCCCCTTCCGG
AACGTCTATATCTATCAAACAAGCAACTCTAACACGATAGGGAATTCGGG
CCCCTTCCGGAACGTCTATATCTATCAAACAAGCAACTCTAACACGATAG
GGAATTTGGGCCCCTTCCGGAACGTCTATATCTATCAAACAAGCAACTCT
AACACGATAGGAAATTCGAGTTTACCCACGTTATTGAGACATTCTCAAAA
GTAAGATTTACGACTGAGATATTTATGATGGTTCTGAATAACTTTTTGGT
ACTTATCTCTTTTTAGATGATTAATTCCCATAGTAAGGAGTGTCCATTTG
AGGTCGTTCCTTGTAAGTTCCACGAGATTGGCTGCAAAATCACTGTAAGT
TGTGTTGTTTATTTAGTCTCTGAATATCAAATCATACCACTTAAAACATG
ACTGTACAGtctaataagcagatattcaataggaAAATATTGGTCATTGA
GATTTTATTAACCTGACTTAATGTATGATATTCAACAAGGCGAAACCTAT
TTATTTCTTTAACTCTTATCTCGCAGAAAGAATAAGTAAATTAGAAAAAC
GTAGTCACGGTAAATTGGAATCAACTTTGCCGATTGTAGTTGTCATAGAG
TGGGGTACCCAGTTGGCGTGAGTTTAAAAGATTCCCATCTATTCATTTCG
TCAGTATTTTTCTGGGACTTCTTTCGCATTCAAATGGTCAATACCGAAGG
GAGTACAAAACACTTATTTGATTTATTCAGTTTGATTTAGTTTTTTATCT
AAAAGATCCCCCCTTCGAGAAAACCTTATTTTCGCCCCATTTTAATGACG
TGACaaataagaatttgaataattttcatTAGGAGAATGcttttgacttc
aaattttcaccaaaggtGTAAATCAAGAAAAGGAAGTGatccacaaaaaa
aattaaaattctttgctgcaaaaaaaccgttttggttgaaaaaaacatta
gcttagaattttaaatttttttcgtgGATCGCTTCCAATGCGATCGTCCT
TCTTTCCCTTTTTAGATATTGAGATCAAAACAGAAGGAGCATGATGAGAC
CTTCCAATCACAACACATGGATTTATTACTCCACAACACTGTTCAATTGA
AAAAAGAGCTTCAAAGCTCGCAGCAAGAgcttgaaaaacaaaaagctcTT
AATGAGAAACAAAAAGGCCTGAATGAGAAAATTATCCATGCTTTGCAAGC
AACCAATGGATTCATAGACCTCACAGTAGCTCGTTTGTTTGAGTTGCTAA
GGAAACCGCGTTCTCCGTACGGGCTCTTTGAGGATGCTATTCAGTACGAC
AGCTATCGACTTAGTACAAAAGAACAACGGTTCTTATCTTTAAGTCATGA
AGACCGGATCAAAACCCTTCTTTCAAGAATGGAGATCGGTGAAATTTACC
GCATTAATGAGAATGTAGCGATATTTAAGATACAAGTATCGAAAGCACGT
G
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00065800TCONS_00065800Clytia hemisphaericatranscript
TCONS_00065801TCONS_00065801Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00065800-proteinTCONS_00065800-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_445supercontigscaffold_445:155405..158755 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.6	0.29	0.24	0.08	0	0.15	0.45	0.87	0.73	0.45	0.46	0.58	6.08	5.07	3.88	7.5	1.13	2.05	8.12	8.78	1.89	1.78	0.92	1.47	4.86	4.38	0.99	1.32	0.67	0.65