XLOC_041310 (gene) - C. hemisphaerica

Overview
NameXLOC_041310
Unique NameXLOC_041310
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_448:117032..122484-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_041310 ID=XLOC_041310|Name=XLOC_041310|organism=Clytia hemisphaerica|type=gene|length=5453bp|location=Sequence derived from alignment at scaffold_448:117032..122484- (Clytia hemisphaerica)
CAGCCGATTCTGTTTCATATCATGTGTACCGCATTCATGATAAATTTAAA AAATTGGTTGAGTGTTACCAAAAATCTTTTTGATTTTCTCAAAATGTTAT AGTTGCTATGGCTAAAAATCATGACTTTGATAGCATGATCATCAGTCAGT GTCAATTTATTAACCACTTTAACAATGCAAATTTTTGGGTGACACTCTGT TTCATGGAAAAAATGGGCAGTTTTTGAGCTTTAAAATGCCATAACTTTAG TTTCGCTTGTGCTACAGAGCTATGAGCTCTCATTATTCAGCATTTTTTAT TGTGCATCCTCCGAAATTAAAATCATTCAATGACAATCTCCACTTTAAGC ACTTTAAGCACGATATCCTTTTGAAATCAAGAAGGTCTCTGGTTCCCTTT AAAATAATTTTGCCCATAAACTATGCCTGGATGCTTTGAGAACTTTTTTT GAACTTTTTCATCCAGATTTGGGATGAATTGAGCAGGTTGATTCGCTAAA GTAAAAGAATCGTACCAAAATCAAAAGCCAATCATAAACAAACAATTAGA ACCCAGTCGCATTTCGCTTGTGCTTATTTTGAATGTTTTTTGTTTGTTGA ACAAACAGGTCAGATCGTCACATTCACCATCATATCCCATTAGAGCAGAG CGTGGTATGCACAGAATGGATGATCTGTTATGAGACTACATTTACCATAG CTTCAGTACTGCCATCTAATTTATGATGCAAAAATGGTCAAATTTTAGCA ATGTTGACATACAAAGATTAAGAAATAAATCAAAAAATTTCTCCTACCAT TAAAGGCTAACCCTAATATCTCGATGATTTCCTCCAAGTTTTTAATTTGA AAAGATTGAATTTTGGCAAGAGCTGAATTTCCTAAGTTTTGGTAAAACAC ACTAAATTGTCAAAATCAGTTCCCTTAGGATTAAATCAGGCAATATACAG AATATTGACTAAATGGCACGAAGAGAAGTAACAAAACCACCCATTCCTCC ATTGAAATCTACACAGAGATTTGGTAAGATCATCGATGGACGACCCATAA GGTTTCGATGTGGATTGCAGAACACTATCTTGGATGTGCTAAAGAATCGA ACAGGATGGGTGGAAGCGTCAGTAGATGGGGACTGGGACTTCATATGGAG TGATAGGTACACATTTTTTTACAATAGAGCATGTGAAATTTCTGAAGCCT TCAGACGTTCTTAACTTTTTGAGTTTCAAGCCAAAAAATGTTTTTAAAAT GTTCTTATTTTCCCCATTTTGTGAGTATTCTTGTGCAATGTCCTAAGAAA TCGGGTGTTTTAGAGTTTATTAAGCCTTAAAATGTTCTTAACCTGTTCTT GATATTTTGGAAATTGAAACCTTTTGTTCTTGTATAGTTCTCATAAAAAA CGTGTAAATGACTGATTAATAAAAAAAGGAATAACCCGATAAAAAGTGAA ATTTAGCACATAGATTCCTTCCATGGAATTTGAATTATCATCCTTCAAAA ATCTTAGTTTGTTAAAAAATATTTGGCGTTTCATGAGGACTTTACTGACG TAATTTTTGGCTGAATTTTAGTTTTAACTTTTTTCAGTAACCCTTTTAAT CTAAAATTAACAAGAATCAATTTAGCAATAACACATTTTTTAGTTTTTGT GAATCTGGAGATCGAAACTTCTGTCAAAATATCTTTCTTAAAAAAAAACA AAAAACTTGTGCAATTGAGACTTGTTATTAACCTAAAAATATATTGTCGC TGCTTCTTCCTCGTTGTTTTTTTTTAATTGACAGTATTAAATTTTGATCT TAGTCCTGTACTGAAATCTAAACAAACTTTAAGACTTTAAACTTTTGTAC AGATAAAGTTTAAGACATAAAACAAAAAGATACAAATAATTTAAATTTTA TTTTACCTATTTTCTTTGTCAGGTGCGGTATTATGGAGATTTACGATAAC CAATACCTCGAGGAGCACGTCAAACTGAATCACTTCAGAAACCATTATGA ACTTACTCGTAAAAACTTGATGGCTAAGAATCTGAAACGGTTGAAGAAAC AAGTGGAACGTGAACAAGGTTTGTTTGTTACGCTTTTTTGTTTATAATAG TGTCATAATAATGTTTTTCCATTTCTTCATCGTTGGTATTATTAATTTGT TGGGGAAAATCATCCTAAAATATTCTCAAGGTATTCTTAGGACATGATTC AAAGTCTATCTAAAATCGACATTAATATATATATACCTCAAGCTAAAAAA TGGCAGTTTTTACGAAAGTTTTATGTATTACTTGGGGGATAATTGGCCAT TTACAGGTAAAAAGGATCCTAAAATGCCGATCATAGATTCAGTTACCGAA TTCCATGATTGTGATATTCTGAGTATTTTTTGACCAATTTTATTTCATGA TTATCATAATACTTTTATTTATAAAATAAATACATTATAAAATACTTTCT CATGAAAAAAGCGTGTATTTACAGCCACGATCTCGGCTCCCCCTACTCAG AGCTGTGAAACCTCACTCGAAAGGTTACACAAAATTACATTTAAGGCCTT CTTTAGTCGACTTGAATGCCAGTAAATCTCACCTTGAAGCAATTAATCTA CTTGTCTCTTGGGATTTTATAAGAGGCTCTTCACTTTGGGAATTTTGAAG AGACAGAATTCTTCTTTGGAGTTTTTCTTTTACCTTGTCTAACTGTGCAT CATCTTTGTAAGGCCTTTTAGTCGACTCGGATGAAAGTAAATTTCACCCA GAAGCAATTATTGTCTTCTTGTCTCTTTTGTTTTTATAAGAGGCTCTTCA CTTTGGATTTGTGTTTTAAATGTGTATCTTTTTTCAAACTCTACAGGAAA GCTTGAAGCAGCCAAACTGGACTTCTTTCCACAAACATTCGAGTTACCAA GCGAATACCACATGTTTGTGGAAGAATTCAAAAAGTATCCTGGCAAATTA TGGATCATGAAACCAATCGCCAAATCTCAAGGTAAGGGCATTTTCTTGTT CAAAAAATTGAAAGACATTATGGATTGGAAGAAAGAAGACTATTACCGAA GCATCGATGAGAAAAGAGAAGATAAGGAGATCCCAGAAGCTTACATTGTC CAAAGGTACATTGATAACCCTTATTTAGTCGGTGGACGTAAATTTGATCT TCGTGTTTACGTTTTGGTCAGCTCGTATATCCCACTGAAAGCTTGGTTGT ATCGCGATGGATTCGCCAGGTTCACCAACGTTAGATACACCTTGAACTCC ATCGATGATCAATACATCCATTTGACCAATGTGGCCATCCAAAAGCAAGC CCCTGATTATGACCCTGATGGTTTGAAATGGACTTTACAACAATTGAGAA TGTATTTGACTGCTAAATATGGTGTAGGTGTTGTGCAAGAACTGTTCAGA CTTATGGACGAGATTTTTATTAAAAGTTTACAAAGCGTACAACGTGTCAT GATTAATGATAAACATTGTTTTGAGCTTTATGGTTACGATATCTTGATTG ATGAGGATTTAAAGCCTTGGTTATGCGAAATCAACGCATCTCCATCATTG ACGGCTAGCAATCAACTGGATTACGAGATGAAGCATGCGTTATTAACGGA CGTATTGAATGTTTTGGATATTGAGGGTAAGATGACAGGTCATGAGAAAA GAGTTGGTGGATTTGATTTGATGTGGAATGACGGTCCGGTCATGGCTGAT GATTTTTGTATTAACGAGTTAGCGGGTACTGGCGCTTTCACGTCGAACAC GTTCTTGGGATGTTGTAACGATCGGGTGCCGCAATTGAAACAAATGTATA AAATGGCTGCACAAACGAAAAGTGCTAACTGAATCACGTGGAAACCTTGA CATTGGGATTTTGTTTCCTTTACTGCAATTTTTTGAAAAGTACTGCACCG GAAAATGAAAATGCATCTTCATAAATTATTTTAAGTCAACAACAGCCTCC TTTTGAAACCATTACCAAGGTGATTAAATCCCTTGATGATTTAAGTGTTA ATTTTTAAATAGCGTAAACTTTTTATGAATTCCTCTGGAATCAATTACCT TAGCAATATTTTGAAAGCGAGGTAAGCGTTGCTCGTGACGTAATTTATGA AAGGTCTACTGGGACAAGTACTAACAAAAAATGCAAACTAAATCAAGCGG CTGTCATAAATCTTGATATTACGCGTATAACTGGCGATGAAGCTTAAATT CAACGTGCCATTGTTTACTTCTCCACGTGCATTATCAATGGCCCTATATC TTATCACGATAGTATCAGAAACATGTGTGTGGTACCTTATAATCACGATG CCGTAAAGCTCCGGTTAGACACTGTCACATTTTAAGGAATATAAATAACA TTTTCTCATAACAAATCTAGCGGATTTGTCTGACATTCAGACGAAATCAT TTTTAATATAACCGCTTTTTATGAAAGGGTATATATTGTATTGATGACAA CGTATTATTAAGAAGCTCTAATTGCATCTCTTAAGAGTATCTCTTATATA GTTGTTTTTTAATAAGACTTTTCCTGATATAGCTACAACTTCATTCAATG ACCTTTGCTGTGTTTATGTGTTTTTTTGTGAGTTATTAAGCTTATTGGTT AATGTTATGAGAATTGTTAATTCAAGGAAAGTACTTTTGTTTCACATACT GAAACACTGTCTTTTTTAGCTGAAGAGTCTTTGATTAAGTCGAATTTTAA AAGTCATGTTCGTTTGTTATGTTTTATGACGGAGAATTCTGTCTGTATGT TGCGTGCATACTATATTTCTTAATGATACATTATTATACAGTTGACGCTC TCTAATTCGATTTTCAAGGGGAATCATATTTTCATCGAATAAGAGAGGGT ATCGAATAGTACAGTGTTGGTTTTGAGAGTTTCTTGTTGGTGACTTTTGA ATTTTTTTTTCTTTGTTGAAACGTAAACACAGGGTACACTACGAACATAT ATTACAAAGTACTACTGAACATTAATATAGTCCCTCCCTCCGCTAGAAAC TTAAGCTATATCGCCAGAGTTTTTTGACTTTCGAATTAAGGAGTGTATCA AATAGGAGAGCCTTATACCTGTATTATCCGCGTGTAAGAGTTCAGAGTAT AATTGAAAGGGGGAGGTGGTTAATTTATTGATTTCTTAAAATATTTAACT CTATATGAACTGTACAATTTAACTGTGTGTACATTTTTTATTACCTACGA TCAGATTCGTGTTGATATTGTAAATATTGTTCAGATTTTTTTCACATTAT AAAAAGAAACCTTCCATAGTAAAGAGTTTTTTGGGATGTTTTCTGGGTGA ATGGCTGACCTTGTACTCGTAAGTCTTTGTTCCAATCTCGTCATCCTCTA CCTAATTCTGTCACCATTATCTTTTCAACCACATTAATGGGAGTGCTTGA AAGTTGTCTATACGTTTTTTTTTATAAGAATGCCCAGCCATTTTAAAGCC GTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00065939TCONS_00065939Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00065939-proteinTCONS_00065939-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_448supercontigscaffold_448:117032..122484 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
TTLL9PREDICTED: probable tubulin polyglutamylase TTLL9 isoform X8 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.79 1.67 1.25 1.24 9.68 7.93 5.85 6.27 3.73 3.5 2.99 2.38 1.75 1.71 1.03 1.32 1.11 1.25 1 0.93 1.02 1.23 1.4 1.43 6.03 5.85 1.01 1 0.91 0.84