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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00065939 ID=TCONS_00065939|Name=TCONS_00065939|organism=Clytia hemisphaerica|type=transcript|length=3909bp
cagCCGATTCTGTTTCATATCATGTGTACCGCATTcatgataaatttaaa
aaattggttgagtgttaccaaaaatctttttgattttctcaaaatgttaT
AGTTGCTATGGCTAAAAATCATGACTTTGATAGCATGATCATCAGTCAGT
GTCAATTTATTAACCACTTTAACAATGCAAATTTTTGGGTGACACTCTGT
TTCATGGAAAAAATGGGCAgtttttgagctttaaaatgCCATAACTTTAG
TTTCGCTTGTGCTACAGAGCTATGAGCTCTCATTATTCAGCATTTTTTAT
TGTGCATCCTCcgaaattaaaatcattcaatgACAATCTCCACTTTAAGC
ACTTTAAGCACGATATCCTTTTGAAATCAAGAAGGTCTCTGgttcccttt
aaaataattttgcccataaactatgcctggatgctttgagaacttttttt
gaactttttcatccagatttgggaTGAATTGAGCAGGTTGATTCGCTAAA
GTAAAAGAATCGTACCAAAATCAAAAGCCAATCATAAACAAAcaattaga
acccagtcgcatTTCGCTTGTGcttattttgaatgttttttgtttgttga
aCAAACAGGTCAGATCGTCACATTCACCATCATATCCCAttagagcagag
cgtggtatgcacagaatggatgatctgttatgagactACATTTACCATAG
CTTCAGTACTGCCATCTAATTTATGAtgcaaaaatggtcaaattttaGCA
ATGTTGACATACAAAGAttaagaaataaatcaaaaaatttctcctACCAT
TAAAGGCTAACCCTAATATCTCGATGATTTCCTCCaagtttttaatttga
aaagattgaattttgGCAAGAGCTGAATTTCCTAAGTTTTGGTAAAACAC
ACTAAATTGTCAAAATCAGTTCCCTTAGGATTAAATCAGGCAATATACAG
AATATTGACTAAATGGCACGAAGAGAAGTAACAAAACCACCCATTCCTCC
ATTGAAATCTACACAGAGATTTGGTAAGATCATCGATGGACGACCCATAA
GGTTTCGATGTGGATTGCAGAACACTATCTTGGATGTGCTAAAGAATCGA
ACAGGATGGGTGGAAGCGTCAGTAGATGGGGACTGGGACTTCATATGGAG
TGAtagGTGCGGTATTATGGAGATTTACGATAACCAATACCTCGAGGAGC
ACGTCAAACTGAATCACTTCAGAAACCATTATGAACTTACTCGTAAAAAC
TTGATGGCTAAGAATCTGAAACGGTTGAAGAAACAAGTGGAACGTGAACA
AGGAAAGCTTGAAGCAGCCAAACTGGACTTCTTTCCACAAACATTCGAGT
TACCAAGCGAATACCACATGTTTGTGGAAGAATTCAAAAAGTATCCTGGC
AAATTATGGATCATGAAACCAATCGCCAAATCTCAAGGTAAGGGCATTTT
CttgttcaaaaaattgaaagacaTTATGGATTGGAAGAAAGAAGACTATT
ACCGAAGCATCGATGAGAAAAGAGAAGATAAGGAGATCCCAGAAGCTTAC
ATTGTCCAAAGGTACATTGATAACCCTTATTTAGTCGGTGGACGTAAATT
TGATCTTCGTGTTTACGTTTTGGTCAGCTCGTATATCCCACTGAAAGCTT
GGTTGTATCGCGATGGATTCGCCAGGTTCACCAACGTTAGATACACCTTG
AACTCCATCGATGATCAATACATCCATTTGACCAATGTGGCCATCCAAAA
GCAAGCCCCTGATTATGACCCTGATGGTTTGAAATGGACTTTACAACAAT
TGAGAATGTATTTGACTGCTAAATATGGTGTAGGTGTTGTGCAAGAACTG
TTCAGACTTATGGACGagatttttattaaaagtttaCAAAGCGTACAACG
TGTCATGATTAATGATAAACATTGTTTTGAGCTTTATGGTTACGATATCT
TGATTGATGAGGATTTAAAGCCTTGGTTATGCGAAATCAACGCATCTCCA
TCATTGACGGCTAGCAATCAACTGGATTACGAGATGAAGCATGCGTTATT
AACGGACGTATTGAATGTTTTGGATATTGAGGGTAAGATGACAGGTCATG
AGAAAAGAGTTGGTGGATTTGATTTGATGTGGAATGACGGTCCGGTCATG
GCTGATGATTTTTGTATTAACGAGTTAGCGGGTACTGGCGCTTTCACGTC
GAACACGTTCTTGGGATGTTGTAACGATCGGGTGCCGCAATTGAAACAAA
TGTATAAAATGGCTGCACAAACGAAAAGTGCTAACTGAATCACGTGGAAA
CCTTGACATTGGGATTTTGTTTCCTTTActgcaattttttgaaaagtact
GCACcggaaaatgaaaatgcatcttcataaattattttaagtCAACAACA
GCCTccttttgaaaccattaccaaggtgattaaatcccttgATGATTTAA
GTGTTAATTTTTAAATAGCGTAAACTTTTTATGAATTCCTCTGGAATCAA
TTACcttagcaatattttgaaagcgaggtaagcgttgctcgtgacgtaat
ttatgaaaggtCTACTGGGACAAGTACTAACAAAAAATGCAAACTAAATC
AAGCGGCTGTCATAAATCTTGATATTACGCGTATAACTGGCGATGAAGCT
TAAATTCAACGTGCCATTGTTTACTTCTCCACGTGCATTATCAATGGCCC
TATATCTTATCACGATAGTATCAGAAACATGTGTGTGGTACCTTATAATC
ACGATGCCGTAAAGCTCCGGTTAGACACTGTCACATTTTAAGGAATATAA
ATAACATTTTCTCATAACAAATCTAGCGGATTTGTCTGACATTCAGACGA
AATCATTTTTAATATAACCGCTTTTTATGAAAGGGTATATATTGTATTGA
TGACAACGTATTATTAAGAAGCTCTAATTGCATCTCTTAAGAGTATCTCT
TATATagttgttttttaataagactTTTCCTGATATAGCTACAACTTCAT
TCAATGACCTTTGCTGTGTTTATGTGTTTTTTTGTGAGTTATTAAGCTTA
TTGGTTAATGTTATGAGAATTGTTAATTCAAGGAAAGTACTTTTGTTTCA
CATACTGAAACACTGTCTTTTTTAGCTGAAGAGTCTTTGATTAAGTCGAA
TTTTAAAAGTCATGTTCGTTTGTTATGTTTTATGACGGAGAATTCTGTCT
GTATGTTGCGTGCATACTATATTTCTTAATGATACATtattatacagttg
acgctctctaattcgattttcaaggggaatcatattttcatcgaataaga
gaggGTATCGAATAGTACAGTGTTGGttttgagagtttcttgttggtgac
ttttgaatttttttttctttgttgaaaCGTAAACACAgggtacactacga
acatatattacaaagtACTACTGAACattaatatagtccctccctccGCT
AGAAACTTAAGCTATATCGCCAGAGTTTTTTGACTTTCGAATTAAGGAGT
GTATCAAATAGGAGAGCCTTATACCTGTATTATCCGCGTGTAAGAGTTCA
GAGTATAATTGAAAGGGGGAGGTGGTTAATTTATtgatttcttaaaatat
ttaaCTCTATATGAACTGTACAATTTAACTGTGTGTACATTTTTTATTAC
CTACGATCAGATTCGTGTTGATATTGTAAATAttgttcagatttttttca
CATTATAAAAAGAAACCTTCCATAGTAAAGAGTTTTTTGGGATGTTTTCT
GGGTGAATGGCTGACCTTGTACTCGTAAGTCTTTGTTCCAATCTCGTCAT
CCTCTACCTAATTCTGTCACCATTATCTTTTCAACCACATTAATGGGAGT
GCTTGAAAGTTGtctatacgtttttttttataagaatgcccAGCCATTTT
AAAGCCgtt Run BLAST on NCBI protein sequence of TCONS_00065939-protein >TCONS_00065939-protein ID=TCONS_00065939-protein|Name=TCONS_00065939-protein|organism=Clytia hemisphaerica|type=polypeptide|length=441bp
MARREVTKPPIPPLKSTQRFGKIIDGRPIRFRCGLQNTILDVLKNRTGWV
EASVDGDWDFIWSDRCGIMEIYDNQYLEEHVKLNHFRNHYELTRKNLMAK
NLKRLKKQVEREQGKLEAAKLDFFPQTFELPSEYHMFVEEFKKYPGKLWI
MKPIAKSQGKGIFLFKKLKDIMDWKKEDYYRSIDEKREDKEIPEAYIVQR
YIDNPYLVGGRKFDLRVYVLVSSYIPLKAWLYRDGFARFTNVRYTLNSID
DQYIHLTNVAIQKQAPDYDPDGLKWTLQQLRMYLTAKYGVGVVQELFRLM
DEIFIKSLQSVQRVMINDKHCFELYGYDILIDEDLKPWLCEINASPSLTA
SNQLDYEMKHALLTDVLNVLDIEGKMTGHEKRVGGFDLMWNDGPVMADDF
CINELAGTGAFTSNTFLGCCNDRVPQLKQMYKMAAQTKSAN Run BLAST on NCBI transcript from alignment at scaffold_448:117032..122484- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00065939 ID=TCONS_00065939|Name=TCONS_00065939|organism=Clytia hemisphaerica|type=transcript|length=5453bp|location=Sequence derived from alignment at scaffold_448:117032..122484- (Clytia hemisphaerica)
CAGCCGATTCTGTTTCATATCATGTGTACCGCATTCATGATAAATTTAAA
AAATTGGTTGAGTGTTACCAAAAATCTTTTTGATTTTCTCAAAATGTTAT
AGTTGCTATGGCTAAAAATCATGACTTTGATAGCATGATCATCAGTCAGT
GTCAATTTATTAACCACTTTAACAATGCAAATTTTTGGGTGACACTCTGT
TTCATGGAAAAAATGGGCAGTTTTTGAGCTTTAAAATGCCATAACTTTAG
TTTCGCTTGTGCTACAGAGCTATGAGCTCTCATTATTCAGCATTTTTTAT
TGTGCATCCTCCGAAATTAAAATCATTCAATGACAATCTCCACTTTAAGC
ACTTTAAGCACGATATCCTTTTGAAATCAAGAAGGTCTCTGGTTCCCTTT
AAAATAATTTTGCCCATAAACTATGCCTGGATGCTTTGAGAACTTTTTTT
GAACTTTTTCATCCAGATTTGGGATGAATTGAGCAGGTTGATTCGCTAAA
GTAAAAGAATCGTACCAAAATCAAAAGCCAATCATAAACAAACAATTAGA
ACCCAGTCGCATTTCGCTTGTGCTTATTTTGAATGTTTTTTGTTTGTTGA
ACAAACAGGTCAGATCGTCACATTCACCATCATATCCCATTAGAGCAGAG
CGTGGTATGCACAGAATGGATGATCTGTTATGAGACTACATTTACCATAG
CTTCAGTACTGCCATCTAATTTATGATGCAAAAATGGTCAAATTTTAGCA
ATGTTGACATACAAAGATTAAGAAATAAATCAAAAAATTTCTCCTACCAT
TAAAGGCTAACCCTAATATCTCGATGATTTCCTCCAAGTTTTTAATTTGA
AAAGATTGAATTTTGGCAAGAGCTGAATTTCCTAAGTTTTGGTAAAACAC
ACTAAATTGTCAAAATCAGTTCCCTTAGGATTAAATCAGGCAATATACAG
AATATTGACTAAATGGCACGAAGAGAAGTAACAAAACCACCCATTCCTCC
ATTGAAATCTACACAGAGATTTGGTAAGATCATCGATGGACGACCCATAA
GGTTTCGATGTGGATTGCAGAACACTATCTTGGATGTGCTAAAGAATCGA
ACAGGATGGGTGGAAGCGTCAGTAGATGGGGACTGGGACTTCATATGGAG
TGATAGGTACACATTTTTTTACAATAGAGCATGTGAAATTTCTGAAGCCT
TCAGACGTTCTTAACTTTTTGAGTTTCAAGCCAAAAAATGTTTTTAAAAT
GTTCTTATTTTCCCCATTTTGTGAGTATTCTTGTGCAATGTCCTAAGAAA
TCGGGTGTTTTAGAGTTTATTAAGCCTTAAAATGTTCTTAACCTGTTCTT
GATATTTTGGAAATTGAAACCTTTTGTTCTTGTATAGTTCTCATAAAAAA
CGTGTAAATGACTGATTAATAAAAAAAGGAATAACCCGATAAAAAGTGAA
ATTTAGCACATAGATTCCTTCCATGGAATTTGAATTATCATCCTTCAAAA
ATCTTAGTTTGTTAAAAAATATTTGGCGTTTCATGAGGACTTTACTGACG
TAATTTTTGGCTGAATTTTAGTTTTAACTTTTTTCAGTAACCCTTTTAAT
CTAAAATTAACAAGAATCAATTTAGCAATAACACATTTTTTAGTTTTTGT
GAATCTGGAGATCGAAACTTCTGTCAAAATATCTTTCTTAAAAAAAAACA
AAAAACTTGTGCAATTGAGACTTGTTATTAACCTAAAAATATATTGTCGC
TGCTTCTTCCTCGTTGTTTTTTTTTAATTGACAGTATTAAATTTTGATCT
TAGTCCTGTACTGAAATCTAAACAAACTTTAAGACTTTAAACTTTTGTAC
AGATAAAGTTTAAGACATAAAACAAAAAGATACAAATAATTTAAATTTTA
TTTTACCTATTTTCTTTGTCAGGTGCGGTATTATGGAGATTTACGATAAC
CAATACCTCGAGGAGCACGTCAAACTGAATCACTTCAGAAACCATTATGA
ACTTACTCGTAAAAACTTGATGGCTAAGAATCTGAAACGGTTGAAGAAAC
AAGTGGAACGTGAACAAGGTTTGTTTGTTACGCTTTTTTGTTTATAATAG
TGTCATAATAATGTTTTTCCATTTCTTCATCGTTGGTATTATTAATTTGT
TGGGGAAAATCATCCTAAAATATTCTCAAGGTATTCTTAGGACATGATTC
AAAGTCTATCTAAAATCGACATTAATATATATATACCTCAAGCTAAAAAA
TGGCAGTTTTTACGAAAGTTTTATGTATTACTTGGGGGATAATTGGCCAT
TTACAGGTAAAAAGGATCCTAAAATGCCGATCATAGATTCAGTTACCGAA
TTCCATGATTGTGATATTCTGAGTATTTTTTGACCAATTTTATTTCATGA
TTATCATAATACTTTTATTTATAAAATAAATACATTATAAAATACTTTCT
CATGAAAAAAGCGTGTATTTACAGCCACGATCTCGGCTCCCCCTACTCAG
AGCTGTGAAACCTCACTCGAAAGGTTACACAAAATTACATTTAAGGCCTT
CTTTAGTCGACTTGAATGCCAGTAAATCTCACCTTGAAGCAATTAATCTA
CTTGTCTCTTGGGATTTTATAAGAGGCTCTTCACTTTGGGAATTTTGAAG
AGACAGAATTCTTCTTTGGAGTTTTTCTTTTACCTTGTCTAACTGTGCAT
CATCTTTGTAAGGCCTTTTAGTCGACTCGGATGAAAGTAAATTTCACCCA
GAAGCAATTATTGTCTTCTTGTCTCTTTTGTTTTTATAAGAGGCTCTTCA
CTTTGGATTTGTGTTTTAAATGTGTATCTTTTTTCAAACTCTACAGGAAA
GCTTGAAGCAGCCAAACTGGACTTCTTTCCACAAACATTCGAGTTACCAA
GCGAATACCACATGTTTGTGGAAGAATTCAAAAAGTATCCTGGCAAATTA
TGGATCATGAAACCAATCGCCAAATCTCAAGGTAAGGGCATTTTCTTGTT
CAAAAAATTGAAAGACATTATGGATTGGAAGAAAGAAGACTATTACCGAA
GCATCGATGAGAAAAGAGAAGATAAGGAGATCCCAGAAGCTTACATTGTC
CAAAGGTACATTGATAACCCTTATTTAGTCGGTGGACGTAAATTTGATCT
TCGTGTTTACGTTTTGGTCAGCTCGTATATCCCACTGAAAGCTTGGTTGT
ATCGCGATGGATTCGCCAGGTTCACCAACGTTAGATACACCTTGAACTCC
ATCGATGATCAATACATCCATTTGACCAATGTGGCCATCCAAAAGCAAGC
CCCTGATTATGACCCTGATGGTTTGAAATGGACTTTACAACAATTGAGAA
TGTATTTGACTGCTAAATATGGTGTAGGTGTTGTGCAAGAACTGTTCAGA
CTTATGGACGAGATTTTTATTAAAAGTTTACAAAGCGTACAACGTGTCAT
GATTAATGATAAACATTGTTTTGAGCTTTATGGTTACGATATCTTGATTG
ATGAGGATTTAAAGCCTTGGTTATGCGAAATCAACGCATCTCCATCATTG
ACGGCTAGCAATCAACTGGATTACGAGATGAAGCATGCGTTATTAACGGA
CGTATTGAATGTTTTGGATATTGAGGGTAAGATGACAGGTCATGAGAAAA
GAGTTGGTGGATTTGATTTGATGTGGAATGACGGTCCGGTCATGGCTGAT
GATTTTTGTATTAACGAGTTAGCGGGTACTGGCGCTTTCACGTCGAACAC
GTTCTTGGGATGTTGTAACGATCGGGTGCCGCAATTGAAACAAATGTATA
AAATGGCTGCACAAACGAAAAGTGCTAACTGAATCACGTGGAAACCTTGA
CATTGGGATTTTGTTTCCTTTACTGCAATTTTTTGAAAAGTACTGCACCG
GAAAATGAAAATGCATCTTCATAAATTATTTTAAGTCAACAACAGCCTCC
TTTTGAAACCATTACCAAGGTGATTAAATCCCTTGATGATTTAAGTGTTA
ATTTTTAAATAGCGTAAACTTTTTATGAATTCCTCTGGAATCAATTACCT
TAGCAATATTTTGAAAGCGAGGTAAGCGTTGCTCGTGACGTAATTTATGA
AAGGTCTACTGGGACAAGTACTAACAAAAAATGCAAACTAAATCAAGCGG
CTGTCATAAATCTTGATATTACGCGTATAACTGGCGATGAAGCTTAAATT
CAACGTGCCATTGTTTACTTCTCCACGTGCATTATCAATGGCCCTATATC
TTATCACGATAGTATCAGAAACATGTGTGTGGTACCTTATAATCACGATG
CCGTAAAGCTCCGGTTAGACACTGTCACATTTTAAGGAATATAAATAACA
TTTTCTCATAACAAATCTAGCGGATTTGTCTGACATTCAGACGAAATCAT
TTTTAATATAACCGCTTTTTATGAAAGGGTATATATTGTATTGATGACAA
CGTATTATTAAGAAGCTCTAATTGCATCTCTTAAGAGTATCTCTTATATA
GTTGTTTTTTAATAAGACTTTTCCTGATATAGCTACAACTTCATTCAATG
ACCTTTGCTGTGTTTATGTGTTTTTTTGTGAGTTATTAAGCTTATTGGTT
AATGTTATGAGAATTGTTAATTCAAGGAAAGTACTTTTGTTTCACATACT
GAAACACTGTCTTTTTTAGCTGAAGAGTCTTTGATTAAGTCGAATTTTAA
AAGTCATGTTCGTTTGTTATGTTTTATGACGGAGAATTCTGTCTGTATGT
TGCGTGCATACTATATTTCTTAATGATACATTATTATACAGTTGACGCTC
TCTAATTCGATTTTCAAGGGGAATCATATTTTCATCGAATAAGAGAGGGT
ATCGAATAGTACAGTGTTGGTTTTGAGAGTTTCTTGTTGGTGACTTTTGA
ATTTTTTTTTCTTTGTTGAAACGTAAACACAGGGTACACTACGAACATAT
ATTACAAAGTACTACTGAACATTAATATAGTCCCTCCCTCCGCTAGAAAC
TTAAGCTATATCGCCAGAGTTTTTTGACTTTCGAATTAAGGAGTGTATCA
AATAGGAGAGCCTTATACCTGTATTATCCGCGTGTAAGAGTTCAGAGTAT
AATTGAAAGGGGGAGGTGGTTAATTTATTGATTTCTTAAAATATTTAACT
CTATATGAACTGTACAATTTAACTGTGTGTACATTTTTTATTACCTACGA
TCAGATTCGTGTTGATATTGTAAATATTGTTCAGATTTTTTTCACATTAT
AAAAAGAAACCTTCCATAGTAAAGAGTTTTTTGGGATGTTTTCTGGGTGA
ATGGCTGACCTTGTACTCGTAAGTCTTTGTTCCAATCTCGTCATCCTCTA
CCTAATTCTGTCACCATTATCTTTTCAACCACATTAATGGGAGTGCTTGA
AAGTTGTCTATACGTTTTTTTTTATAAGAATGCCCAGCCATTTTAAAGCC
GTT Coding sequence (CDS) from alignment at scaffold_448:117032..122484- >TCONS_00065939 ID=TCONS_00065939|Name=TCONS_00065939|organism=Clytia hemisphaerica|type=CDS|length=1326bp|location=Sequence derived from alignment at scaffold_448:117032..122484- (Clytia hemisphaerica)
ATGGCACGAAGAGAAGTAACAAAACCACCCATTCCTCCATTGAAATCTAC
ACAGAGATTTGGTAAGATCATCGATGGACGACCCATAAGGTTTCGATGTG
GATTGCAGAACACTATCTTGGATGTGCTAAAGAATCGAACAGGATGGGTG
GAAGCGTCAGTAGATGGGGACTGGGACTTCATATGGAGTGATAGGTGCGG
TATTATGGAGATTTACGATAACCAATACCTCGAGGAGCACGTCAAACTGA
ATCACTTCAGAAACCATTATGAACTTACTCGTAAAAACTTGATGGCTAAG
AATCTGAAACGGTTGAAGAAACAAGTGGAACGTGAACAAGGAAAGCTTGA
AGCAGCCAAACTGGACTTCTTTCCACAAACATTCGAGTTACCAAGCGAAT
ACCACATGTTTGTGGAAGAATTCAAAAAGTATCCTGGCAAATTATGGATC
ATGAAACCAATCGCCAAATCTCAAGGTAAGGGCATTTTCTTGTTCAAAAA
ATTGAAAGACATTATGGATTGGAAGAAAGAAGACTATTACCGAAGCATCG
ATGAGAAAAGAGAAGATAAGGAGATCCCAGAAGCTTACATTGTCCAAAGG
TACATTGATAACCCTTATTTAGTCGGTGGACGTAAATTTGATCTTCGTGT
TTACGTTTTGGTCAGCTCGTATATCCCACTGAAAGCTTGGTTGTATCGCG
ATGGATTCGCCAGGTTCACCAACGTTAGATACACCTTGAACTCCATCGAT
GATCAATACATCCATTTGACCAATGTGGCCATCCAAAAGCAAGCCCCTGA
TTATGACCCTGATGGTTTGAAATGGACTTTACAACAATTGAGAATGTATT
TGACTGCTAAATATGGTGTAGGTGTTGTGCAAGAACTGTTCAGACTTATG
GACGAGATTTTTATTAAAAGTTTACAAAGCGTACAACGTGTCATGATTAA
TGATAAACATTGTTTTGAGCTTTATGGTTACGATATCTTGATTGATGAGG
ATTTAAAGCCTTGGTTATGCGAAATCAACGCATCTCCATCATTGACGGCT
AGCAATCAACTGGATTACGAGATGAAGCATGCGTTATTAACGGACGTATT
GAATGTTTTGGATATTGAGGGTAAGATGACAGGTCATGAGAAAAGAGTTG
GTGGATTTGATTTGATGTGGAATGACGGTCCGGTCATGGCTGATGATTTT
TGTATTAACGAGTTAGCGGGTACTGGCGCTTTCACGTCGAACACGTTCTT
GGGATGTTGTAACGATCGGGTGCCGCAATTGAAACAAATGTATAAAATGG
CTGCACAAACGAAAAGTGCTAACTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00065939-exon-scaffold_448-1575043694:121329..122484 | TCONS_00065939-exon-scaffold_448-1575043694:121329..122484 | Clytia hemisphaerica | exon |
| TCONS_00065939-exon-scaffold_448-1575043694:120417..120562 | TCONS_00065939-exon-scaffold_448-1575043694:120417..120562 | Clytia hemisphaerica | exon |
| TCONS_00065939-exon-scaffold_448-1575043694:117032..119638 | TCONS_00065939-exon-scaffold_448-1575043694:117032..119638 | Clytia hemisphaerica | exon |
| TCONS_00065939-exon-scaffold_448-1510915933:121329..122484 | TCONS_00065939-exon-scaffold_448-1510915933:121329..122484 | Clytia hemisphaerica | exon |
| TCONS_00065939-exon-scaffold_448-1510915933:120417..120562 | TCONS_00065939-exon-scaffold_448-1510915933:120417..120562 | Clytia hemisphaerica | exon |
| TCONS_00065939-exon-scaffold_448-1510915933:117032..119638 | TCONS_00065939-exon-scaffold_448-1510915933:117032..119638 | Clytia hemisphaerica | exon |
| TCONS_00065939-exon-scaffold_448-1491911889:121329..122484 | TCONS_00065939-exon-scaffold_448-1491911889:121329..122484 | Clytia hemisphaerica | exon |
| TCONS_00065939-exon-scaffold_448-1491911889:120417..120562 | TCONS_00065939-exon-scaffold_448-1491911889:120417..120562 | Clytia hemisphaerica | exon |
| TCONS_00065939-exon-scaffold_448-1491911889:117032..119638 | TCONS_00065939-exon-scaffold_448-1491911889:117032..119638 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_448 | supercontig | scaffold_448:117032..122484 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR004344 | TTL/TTLL_fam |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006464 | cellular protein modification process |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0006464 |
cellular protein modification process |
Blast
BLAST of TCONS_00065939 vs. Swiss-Prot (Human)
Match: TTLL9 (Probable tubulin polyglutamylase TTLL9 OS=Homo sapiens GN=TTLL9 PE=2 SV=3) HSP 1 Score: 502.671 bits (1293), Expect = 1.205e-164 Identity = 248/416 (59.62%), Postives = 316/416 (75.96%), Query Frame = 3
Query: 1047 IRFRCGLQNTILDVLKNRTGWVEASVDGDWDFIWSDRCGIMEIYDNQYLEEHVKLNHFRNHYELTRKNLMAKNLKRLKKQVEREQGKLEAAKLDFFPQTFELPSEYHMFVEEFKKYPGKLWIMKPIAKSQGKGIFLFKKLKDIMDWKKEDYYRSIDEKREDKEIP-EAYIVQRYIDNPYLVGGRKFDLRVYVLVSSYIPLKAWLYRDGFARFTNVRYTLNSIDDQYIHLTNVAIQKQAPDYDP-DGLKWTLQQLRMYLTAKYGVGVVQELFRLMDEIFIKSLQSVQRVMINDKHCFELYGYDILIDEDLKPWLCEINASPSLTASNQLDYEMKHALLTDVLNVLDIEGKMTGHEKRVGGFDLMWNDGPVMADDFCINELAGTGAFTSNTFLGCCNDRVPQLKQMY-KMAAQTKSAN 2285
IRF+ L NT++DVL++R GWVE +G+WDF W D + E +D+ Y++EHV+++HFRNHYELTRKN M KNLKR +KQ+ERE GKLEAAK DFFP+TFE+P EYH+FVEEF+K PG WIMKP+A+SQGKGIFLF++LKDI+DW+K+ RS D++++D IP E Y+ QRYI+NPYL+GGRKFDLRVYVLV S L G R Q +HLTNVA+QK +PDY P G KWTLQ+ R YL +K+G V+ LFR +D IF+KSLQSVQ+V+I+DKHCFELYGYDILID+DLKPWL E+NASPSLTAS+Q DYE+K LL D L+V+D+E ++TG EKRVGGFDLMWNDGPV ++ +L+G G F +NT LGC NDR QL+Q++ + Q K+++
Sbjct: 44 IRFKTTLMNTLMDVLRHRPGWVEVKDEGEWDFYWCDVSWLRENFDHTYMDEHVRISHFRNHYELTRKNYMVKNLKRFRKQLEREAGKLEAAKCDFFPKTFEMPCEYHLFVEEFRKNPGITWIMKPVARSQGKGIFLFRRLKDIVDWRKDT--RSSDDQKDD--IPVENYVAQRYIENPYLIGGRKFDLRVYVLVMSV--FAECLLWSGHRR-------------QDVHLTNVAVQKTSPDYHPKKGCKWTLQRFRQYLASKHGPEAVETLFRDIDNIFVKSLQSVQKVIISDKHCFELYGYDILIDQDLKPWLLEVNASPSLTASSQEDYELKTCLLEDTLHVVDMEARLTGREKRVGGFDLMWNDGPVSREEGA-PDLSGMGNFVTNTHLGCVNDRKKQLRQLFCSLQVQKKASS 439
The following BLAST results are available for this feature:
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