XLOC_042124 (gene) - C. hemisphaerica

Overview
NameXLOC_042124
Unique NameXLOC_042124
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_47:127799..131871+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_042124 ID=XLOC_042124|Name=XLOC_042124|organism=Clytia hemisphaerica|type=gene|length=4073bp|location=Sequence derived from alignment at scaffold_47:127799..131871+ (Clytia hemisphaerica)
gcctggggcctaaacccaggctgacgctatgatCCAGTCTCACACACACA CGACTACACGACGGTTGTTTCATGCTGTTTGGTTTAGAAAGGCAGAAGGG CCATTCCACAATTTCCAGTGTGGAATTGGTGCAAATGCCACGCCGAAGGC GTAAAGACAATATTGAATTCCTACGCCGTaggtgaaaatgtttttataat ttaaatttGTTACTTTCAATATAAAAGAGATCAAAGAAGAATGGCTAAAC AAACGCTGTATAGCCCTTTATGGGAGGGGGAATATTTATGGCTCAAAGAA TGCTCTGATGATTTATATTTTGGAACTTGCAAGGTTTGTGAAGTAAACTT TTCAGTATTATATGGCTTAAGTTCGATTGAGCAGCATGAGAAGTCAAAAT CACACCAAGATACTCTTTCAGATGCTGTAACCAATGCTGAAATAATGTGG GCTTTGCTATACATAGATGCAGATCTTTCTTTTGATGATAACTTTGGTGT TTCGATGTgtaatgtgttttctgactctGAAATTGCTAAACATCTAGCAA AAGACCTTACTCCTtataaaatgaaatatattgTCCAGTATGGCATTGCT CATTATTTTGAAGGGTTTACAAGCTCCACTGCCAAAGTATCAAACTCAAT GATTGATGCTAAAAGAATGATAAAGGACACTGTCCAATGTTTTGGGTCGT CAGTAAATGTTCCTATAACCAAAAGCCTGATAGAGACAGTGAAACAAGCA AAACAGAAATGTGATGATCATAGTACAAAAAAAGATGCTTCAGCTGTTTC GAAgtctgaagaagaaaatgaggaGGACTCGAAAGTTATAGAATTGGATA ATATAAACACTAAACTAAAGCAGATTATTCATGGACTGCAGGTAGCTGAT GATATCATGGAAAAAAGTAATGAAGATGTGAGATCTTGTATGTCTGAAGA GAAAAGCAAGAAACGAAAACAGACTTTGAAGAGGTCAAAAGCTAGATTTA TTGCCAGtgtgaaaagaaagaaacagtTGAGTGACGACTTGGAAAGCCTT TCAAAGAAGATTGAGGAACTTAAATATCAGTATTAAAGATGGAATTAATT ATGCTTGTTCTAATGGTTTTAGAATTCGTTTACTTTGTTACTCACTGATC TTGGTCTTTTTATATGAGATCATTTTTGTGTCAATTGTTCgtcgtttttt ttattattatacagTACAATAAAGATCTATAAAAACATGCAAAATGTATT ATTATTTTGGAagtttatgaaaatttcttaATGAAAAGTCTTCGGTATTT CAATCAGGAATATTTCTTATAACAATTACATtatattaaaatctttttta ttatgaacaaagaattaaaaaaaaaagaaaaaaagatgagTTTCCGTGGA CGTGGTGGCGGCCGTGGTGGACGTGGAGGAAGAGGCGGAGGCCGTGGCGG TCGAGGTGGTTTTCGACAACAAGACTATGGACCTCCTGAAACTGTCACAG GTATATTATTTATTGTAACTATCAGCTGCAAAGTTTTATCCGTGCAAGCT TTAATTTAAGATGTAATTTTATTCTGTTGTGGTAAGAAACTTTTATAAGA TTTGTGGTCCTACTTTTGCAGACTTCGctctttttacaaaatattactAG AAATATTAACCAAGAATATCTGTCATTCCCCTCTAGAAATTGGTCATCTT TTACATCCATGTGAAGGTGATATGGTGTTGAAGTGTACGAACGAAAACGT TCCTTACTTCAACGCCCCAATCTTCCttgaaaacaaacaacaaattgGCA AAGTCGATGAGATTTTTGGTCCCATAACTGAGTTCTATTTCTCTGTCAAA ATTTCTGATGGTATGAATGCTGATTCattcaaaaaattacaaaaggtTTG TACGGACAACTACTAAACATTTTTTAGAATTATTAAAAGATATTGATGCA TTTGCtttctattttgtttatttttatacgAGGACAGTACTCCTAACGTA GGGCTTTAGCTTAGATTGTAGGTAAAGCTTTATAATCTTAAAAACGTGAT TGTagcaattctttttttttctcattttagttTTTCATTGACCCAATGAA GCTTTTACCTTTAAGTAGGTTCTTATCAAGGAATACCAGAGGTAAGTTTA TTTTCTTCCTTTACAAATCCTGAACAAATTATtagaaaattatattattt agaagatgaaaacaaaaagacTGAATTTGCAGATCAAGTCATTAGATATC TTTTAGCACtacagtcgactctctctaattcgacgttctacttttCGAta tgctccattattcgataatattgaaagtcactgcCAACAAGAAACTTTCA TAAACGACATTCTACTATTTATTCTACGCCCCCTTATTCGGTAAGAATCC AATTTTCATTGGAAATCgatttagagagcgtcaactgtattccaAAGAAA GTTTGTTCATCAAGccgtcaaattgtttttttatgattaaACTTTAATCC ttactttaattttttctcGCACCTTAGGTGGCGGCAGAGGTCGTGGAGGC CGTGGTGGTCGTGGAGGCGGCAGAGGTGGAGGTCGCGGTGGAGGTAGAGG TGGATTCACACCAAGAGGAAGAGGAGGCCGAGGCGGTGGTGGTTTCCGTG GCGGAAGAGGCGGTGGCGGCTTCAGAGGAGGTATGTTTTCTTCTTTATAC TGAGTAATGTTTCTTTACTTGCTCGTTTTTGACCCAAAAGACAacgaatt tttttcactattctttttggttttaataagtgcactttatagtttagatt cccattgaagaatcatattctggttttcatgttaatataatttttttaat tgattaaaatttccttttttgtaGGTCGAGGACGAGGAAGGTTTTAAGGA TATATCAAGGATCAATTTTGTACATAGAATTTTTGCAGAAGAAGTGCGTA TGTTGTAAAGGGGTATAGGTTACTCAAGCCATCACGTTTGGAATCAGTCT ATGTGGAAACGCCCTTCTCTGAATTGTAATGTCAGTGAGAATAAGCAAAG ACTCCATGTATCTGCTAAAGCGGAATTAATGTTTTAAGAACAATGTGGGT GGCGTGAAATGGTTTATGAAATATAGCAATATGAGtattgtataattttt taaagaCAAAGGAGGAAGTTGGTATCGGGCCAAATAATATTTTCacaatg atttttcaaaaatgaaatttgtttttaacttgtttttttcCTCCTGTTGC TTTATTTTTATCTCTTTTtatcgaaatattttttatgcCAGATAGAAGAg aatattttcacaattttatcattttgtgttttatcaggttttataagaaa aacgaAGATTAACTAGTACGCGAAATATTCATTTGATTTTTCCGTTCTTA TTTTACAAATTCtccatttcaaaaatatttacaaaaaacattgaattata aaattattttaactatGCACCTAGGGTTTTCTTGGAAGTATCGAATCTTC TAATTAGCAAGGACTCTGTAATCTTTGTACGAATTTTCGTCTTTTATTCT CGATGCACTTTTCGATTAATGTCTCTTAAAAATTAACGCTGCTATATACG AATGTCATGTTTTGTTGTTTCAGCAAAGTTATTTAATATTAACCAACATA AAAGTGACCTTTAAATCAAAGATGGAATTGAAAAGCTAAAGCGATGCAAT GTTGCACGCCAACAACCTGATGAACGCATGAGTGAACATTTGTCCTTGAA TTTGGCTTGGTTCAAACTCCTCGAATTATCTTGCACCATGtttaaaatgg taatatttttCTCTTAACCCATAGGTGTACTTCTCCTACGAGTAGTCATT CGTCGTGTGGTTCCCATACGTGGGGTTGTCATTCTCCTAGTTGTACCCAT TGGCATCCCTGTCGGTCCAGGGGCTCCTGCAGGTCCAGCAGCCCCTGCAG GTGCGAAGTATTTTACTTCACGTCCGTTTGCAGGTTGAATTGGTCTGAAA TTTCCACACAGTGGCTGTTGACCAGCACCCATCACTGAGCTGAATTTATT GACCTAAGGGAAAGTCAATTTAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00067434TCONS_00067434Clytia hemisphaericatranscript
TCONS_00067435TCONS_00067435Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00067435-proteinTCONS_00067435-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_47supercontigscaffold_47:127799..131871 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
GAR1H/ACA ribonucleoprotein complex subunit 1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
36.37 31.92 44.08 48.81 142.61 108.9 84.87 90.17 40.14 49.7 29.61 37.26 30.25 29.36 38 44.98 56.16 49.03 1.81 3.48 49.54 49.59 59.22 50.05 37.77 48.41 28.01 18.79 40.02 45.09