XLOC_044371 (gene) - C. hemisphaerica

Overview
NameXLOC_044371
Unique NameXLOC_044371
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_60:1422749..1431551-

Legend: transcript
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_044371 ID=XLOC_044371|Name=XLOC_044371|organism=Clytia hemisphaerica|type=gene|length=8803bp|location=Sequence derived from alignment at scaffold_60:1422749..1431551- (Clytia hemisphaerica)
GAAAATTTCAAAGCAAAAGAAAGCTGGATCTGCTGTGGAGAAAAGGAAGA CAGAGGTAAGAAAGCAGAAAGACATTTATTTGACTGTTTGAGTTTTATGA GTAACAAATTACTTAGCATTAGTCTTTAAAGACCAGTCTATCAGTTCTGG ATGTTGCAGAAAACTTTAGCGTTAGTTAGCACTGGCATGTAAATTTTGTC ATCTCACTTTCACTTTTCATGTAGCCTGGGAATCCATGCTATGATTTCTT CTTTGATAAACTGATGGCGAAATGTATAGCATGGTACAGGCTGAGAGTTT GAATTTCTCAGATCCTAATAACGGTTGAAAACATAGCCAATCAAATTTTG TTATTCTTTTACTGGTCACACTTTCTTAGAGAAAGACGTAGAGAAAGCGC AACTTTCGAAATTTGGTTTTTATTTAAGTAAGTGAGGACAGCGCTAAATT CGAATTTCCCACTGTAAAAAATGTGAGTCCAATATTGGACTCACAGCTCG AACCCGTCTTGTGTACATCAAATTACAAAAAAACACACGACGGGTCTCCT GTCTAAAGTTTGTGCTGCTCCGCCACCGTATATTAGCATTTTTTTAAAGC CAAATTCGGAATGTAAGTCCAGGTAAGTTGGGAATTTACTTCCGATAACG GATTACACACTTTTCCTGTATCCTTTTAGCGCCAGAGGCGGTTTGTTGGG CGTAGTATTCTGCCACTCGGCCGCACNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNATTCAGTATGTGAATAGAGCATTAAAAAATACAACTTTTC TATTTTTCCTTTTTTTTGCAAAAGTTCTAGGAATGAAAATAAAAGGATAA TGATAATTGAATATATCCATTGATGATCCGCGGCACTATCGTAAAGCTAG AATCACTTCGCGTACACTTGGCTTGAGAAAATGATTGACAGATTGAAGTT TTTCATCCCCGCGGCGCGTGCCGCGCGGGAGCTCGGGCGCTATGCGAGAG TTCTCGGCTCAATCCTCGGTTGATTGCTAAAAATGGTAAACTGAGCTGTG ATAGATCATTTCGATGGAAGTTGTTGGAATGTTTACAAGGCTCTTGACAG AAATTGAATTGAATTGAATTGAATTGAATATATTTTCGCTGCAACACAGC AGGATAACCCCTTACAAAAAAGAATAGATTTCTCTAATACAATGGGGAAC CTAGAAGAAAATGAAAAATTATTACAGAACTAAAGAAAAAATGAATAAAC GATAATCATATCATAATATTAATAGTGACACAAAATAATGAATATAAGAA ATATTTTTACTTTTATTTTATGAAATTTAGAAAAAATCGTTTGTTTCATT GTCAATGATGACAGTGTGGTTATTAATTTTGTTAGATCTGACAAATTGAT GTTTGTAAGTGCACTTTATAGTTTTGATTCCCATTGAAGAATCATATTCT GGTTTTCATGTTATTAGATGCTGTTTTAGAGCTTTAGGTCTACACTGAAT TATAAAAAAACACACGACGGGTCTCCTGTCTACTTTTCATGTAGCTAGCT AGATCCTTTAAAAAATTTAAATTTCTGCTCTCCTTAAAATGATACACCGT CATCGTCTGGGGTAAGATTCCACTTCCTGCACTAAGATTCCATACACCGA AAAGTACCGTGAGATCGGGTAACTTCAGTTAGGCACATTTAGCGAGTTCC TGTACCCGGCCGCAATCAATAAAATCATAACATCACTCATTAAAAAACGG CGTTCGTGTCTCTTTGCACTTTTTTTAGCCTAGACGATGTAGCAAACATA GTAAGTGTAAGAATACTGTACTTTTAATTGGCTGAATTTTTTTTTTGCAT CGGAAAAACTTTTTCAAACTTTCAGCAATGATTCACCAAACTGTTACAAT AAAAATTATCCAGCGCATTTTTTATCTTCTTACCTTCTTCATCTTCATTA AAGCACTCAAGGTTTACTGAAGTTAAGCACACAAGATATTCTTATAATTA TTCATAATCACTGAAACACTGTTCGTTGTGCGCTGCGGTGGAGTGCATGA CGTAACACGCGCGGCAACTAACTTGCCTTCTGTTGGAAGATCATATTGGG CGTTTTGGCGTTACCTCCCTCAAAGCAGCAGGCGCCTTTGTCTTTCCGCA ACTCTTTCCACCATTTTAGATGGCCTTAACAATAGATTCAAAAGGGCGCC ATAATCTTGGAAGATAATTTGTTTTGGTCTCCGGCTTTGGGAAGTAGCAA TGTTTTTGGTTGTTTTCGATGGAAAATGNTTCGATGGAAAATGGTAAGAA ACTTAAGTTTACAAGTATCATTTAGTTTTTGCTGGCTTATAGAATGGCAG GATCCTGGATGGTTTCCCTAACTGAACTTGCATGTGGACAGTTAGCTAGT ATAGAGGCCCCTGCCCAGCGACCGGTCTAGTTGGCGACTGAACGTCTTTG AACCCAGAAAAGTCATACAAAAACAAACCTCTTGAGAATTTCTTTTGGTA GTTATCTACCTTGACCTATTTCCCGTACTGTGTAAAAAAAGTTCTAGAAA AGAGCGAGTAGAATCCGAAAGATCCAACTTTGCACGGAAGCACATGAAAA ACCCGGATTTTTCAAAAAAAAAAAAAAATGGCTACCTGTGGACAAAAAAG CTTCGTAAGAAAAAACGCTTCAACTGAAGACTCTCCAAAGAGTGCCACTT TCAAAACAAAACAAAAACAAACTTTAGAAAAAAATGGCGACTTGAAGAAA AATTCTGAAAAAGCATGCCGAAGGGAAATATAAGTGAGCTATTTTAAAAC AAAAGAACGAGTGTAAATAAATTTAATATGGGAAAGCTTATGAGTTTTTT TATCATCCTGATCAATTAATATGACCTTACCTGCAAGTAGAGCACTGATT TTCTCTTTCTTGCAATTGGTCGCAGACTGGTACGTCGGTTGGGAACTGGG CACTAGTACCGCTCGCTTTGAAAGTTTTTTATTCTAAGAAGATCTCATCA AATAAAAAATCAAAACAAACACGAAGAGCATGTTAAAAGTTGTCTAACCA TTGGTCGAAAAAGATTTTCAAAAAAGTAAAAAGTAAGTGAAAATTTTGAA TCAAAAAATTTCGGTCGCCAACTGGGCAGTGTACTCTAGACTTGTATATA TCAAGATTACAGGATTTCGTGTACGGGCCAATTTTACTTTCATTTTGAGA GGTCTCATTTTCGATTTCAAGCCAACATCTTAGCAACAGGGTGCTCGCCC ATAGTTGCAGGGGTTTGTGCAAAAAACTAAACATAGAAAATTGTCCAAAT CCCTCATTCTGAATAAACCAATAAAAAATGAAACTTTTCCATGTTTCACT TTTTCAGAGAATTGAACCAGGCGATGTCAACTGAACCCTATCGAATCAAT TTTCTTAATCGAACCATCAAATCTAATTGAACGATAGGTGTTTGATTACC AAACTGAATTGAATAGTAATTTAACTTTACTGTGGAAATATCTTGATTAG TTCAATTAAGTTTGATTAAAAATACGGTATGATGTTGTTCGATGCGTGTT CGAGTAGTTCAATGCGTGTTCGATGATCGTTAGATACTCCAATAGCCTTC GATCGGAAGTTTGATATATTTGACGATTATTCGATACCGTCAAAGTGCAA AAGAACCCTGTTTCTGGACTAAGAATCTTGGTGCTTTACCTTAAACATTA TGCTGTTTTTCTTGAGTATAGCCTTCGATCGGAAGTTTGATATATTCGAT GATTATTCGATACCATCAAAGTGCAAAAGAACCCTGTTTCTGGACTAAGA ATCTTGATGCTTTACCTTAATCATTACGCTGTTTTTCTTGAGTGTACCAG CAATCAAAGATGTTGCGAGAAGTGGTCCAGAAAAAAGTAAGACTCTTACT GAGTGGTTGTCTAACTTTCCAAATTAATTTTTTTGACTATATCCGAAGTT TTTTTCTTTTTCCATTGGTTTACAAATGAACCTAATGGTTTCAAACCTAT AAACTCTAAATTACGGTAAGCAGTGGCTAAAAGGGTGCGGACAGATAGCA GAAAGCACAGTGCAATCGAAAAGAAAATCAAACCTATCGAACATTAATTG AACCTATCGAACTTTAAATCGAATCGTGATCACAGGGTTGCTATGTCAGC CTGAAATGTCTGGAATTAAGTTAAAGTTTGGAAATGTCTGTAATGTAAGT CTGTATGTCTGGAAAGTCACTAATCTCAATCTAAGATTTTCAGTTTGAAA ACCACAATTTTCGTCAGATTACCTAACTTCACACATACCTTAAATTCTCA ACATCCTTTCAGACTTTTTTTTATTTGTTTTTATTGTTCAATCATGTAAT AAAGGTTTTTATATGACTAACATTGTATTTTTATATGTAGCGAGAATGGG CCTTCGGGCCTGATGACTTAAATATATAGGATAGATAGTCTGGAAAAAGT CTGGATTTGGCATACTTGTCTAAAAAAGTCTGGAATTGGCATACCTGTCT TGAAAAAATATGGAATTTGAAGGAATTAGTCCTGAATGAAGTCTAGTAAA CTTTTCCGAAATAGAAAACTTTCCCAAAATAGAAAACTTTCATCCTGGCA TTTGAAATTCCCAAAGATTTCTGCTCGATTCGCTCTCAACCAATTCTGTA AATCATGTCCATTCTGAGATTTGTCATTCTGATGTGTTCATCAATCTGGC CTTTCAAATGACCGTTAAGGAAAAACTAAAAACCTTCCTAAGGGTTAAAA TGTCTGGAAAATATTGTGTATTTCGCTAAAATGTCTGGAATTTTCAACTT GGCAAACCTGTAGCAACCCTAGAATCAATCGAACAGTAATCGAGCTTTAG CCAAATTTCTTGGTTTGATTACTGTTCAATTTGGTTCGGTAATCGAACAC CTATCGTTAGATTGACATCACCTGGATTGAAGATTAGTAATAGTTTACAC CTTAGGCTCATGAATTGAAACAAATGAAAGATGTGTTATTAAGAATATGA TTTTACAGGACTGCCATGCAAGGTACTGAGAGGTGCTGAAAAGGCGCTGA AAAGGGGCCAAAAAGCAGGGCTGTGTTGGTGGAAAATTGATAATCAGTCC GCAAAGGAGCGCTGGGAAGCAATCTGTAGGGTAAAAGATTCAAATGCTAT GTATGTGAGCGCTAGAATGTGGGCGCTTCACATTAAAAATAACACCCAAC ATTAAAAACCATCTGCATGTGCGAAGGGGAAATTTTGTGCATTTGTACAT GGAATATGTTATATTCTTTAGTGAAGGGATGAAGACGGCCGATCTTGCTC TAGTTTGTGTGCAGTATCATGGAATTTAGAAGCAAATGAAATGCAATTTT TTTTAAATTTTCTTAACGGGATTAGCCTTGACCCCCTCCCCCCTTAACGG CCAAATGCCACTAAAAAATTCGAAAATGGAAAGTTGAAGGCCCCTAGAAG AGACCACTTTCTTTTTTGTTGCAGATTTTGATACAAACTTCTCACATGGA TTACCGTAACTTGGTCTAATGTTGACATCCCTCTTCTAATCTCGACACCC TTCTTTAGAGATAGGAATAGTAGAAAGGTCAGAATCGCTTATGGAAACTA TATTTCTTTGCTTAGCAACCAGAGAGGAAAAAATCTTTTGTCTATCAGTG ACTCTGACTTAACTATTATTTCTATCGACATTAGACCAACTTACGGTAAA TTCTGCAAAAATTTCTTCCCACAAAAATGTTTTCCCTTAAAGGTAGTAAG TCAAGTTTAAAAGGTAATACCTCAAACTTTTAATTAGGATATCTACTTTC CAAATAATAATAGCTCCAAGCACTTTGGAACATTTGTTTTGACATAAGGC CATCAAAAACTGCCAGGCTGTTGAGGTTGTAGTTTTTCTAGGGTCACCCA GTTTATTTATCTAGACTGTATCTGGCTATTAACTGGATAGCAAAAATTGT AGGCTATATAATTATAGGACACCCCAGAATATCATGTTTTATGGTAACTA CCTACCCTTTCAAAGAGACCTTAAAGCTATATACTGTAATAAAGCATTAC TGTACTTGCTTTGTTCTGGCTAAATAAAATACTTTGTATAAATTACCTTT CTACATTACGAAAATGTAATTTCTTCATGTAGCCTCTCTATTTTAAAAGA TATCCATCCTTCTATTGGGCCTTCAAAACAATCCTTCAAAACACCACCAT TCTGGAAATTGTCAGGGATCCTCAGGATTAAACTCTAAGAGATACCACAA ATATTTCCTATTCGGTTGGCTGTATTAAAGGCTCTTTAGAATTTCTTGCA AGCCTGATTTTATTAAGAGACAAATAATGATAAATTTGTGCTACTAACTA ATGATCTTTATTGAAAAATACTGTGACCAACTTCATTACATGCTTTTTGC GTTTTGTTGTTGTTACTTACCTTGATATATTTAAACTTACATAGAAAATT TACAACCAAGGATGATCATCTGAGCTGAGGCATTGAGTTTTTAATATGGC ACATCAGAAGGTTGATGTCAAGGTTGTTTTGCTTGGAAAGGAATATGGAG GAAAGACAAGTCTAGTTGAACGATATATTCACGAGAGGTTCAATTCAAAT CAGCCTTACCAAAATGTGAGTTTTTTCCTATTTCTTAGGGAATATTTCAT GCTTAGTTTGTATTCTCAATTGTAAATTTCTCTAAAAAGTTTGCACCTTT AGCTTTAAAAAAGTCTTAGATCCTTGTGTTTCTCTTTCATTTATAGACAA TTGGAGCAGCCTTTGGGGCAAAAACATTACACATCGATGGAAAATCAGTA ACACTTGGGATATGGGTTTGTCACTTTTTCATAAATTTCATAAATTAATA AGAAATATTTCAAAAAAAGTAAATATTCAACAACCTTGAACTTACCATGA TGAGAAATTAAGGGAGATTATATTATGGTTGTATTTGTGTATTATTCTAT CAGATAACATTATTTGAAGCATGAAAGAAGCAACGTTTTTATATATGTAC AAATAAAATAAATATCATTCTAGGATACTGCTGGCTCTGAGAGGTATGAA GCGATGAGCAGAATATATTATAGAGGTGCAAAAGCTGCCGTTGTTTGTTT TGGTCAGTATTGTCCCTTTCTATGAGTATTTTCTCCACAATTTTCTAAGC TCTTATTTTTGATTATGAATCAAATCTTTTTGTTGATGAATTTTCTAAAT TACTTCTATCAACAATACATGTTTTACACCATTTTCTATCTCGCTCAAAG ATGTAACCACTCATCATTCTTTGTTTTCTTTTTGAATTAGATTTAACGGA TGATAATAGTTGGGACAGAGCAAGATTTTGGATTCAAGAAGTTCATGGGC ATGAAGAGGTACTAAATTTGTTTTAAAATTTTTTCAAATATTATACAATA AAAATGATACGCATCAACTAAAGTCTTCCCAATTACTTTAACTCACTTTT AAATTTTTTTCTTAGAGTACTTTGCTTATAATTGACATTTAATAATTAAA AATATATCAAGTGAAAACACGAGAGAAATTGTCAATAATTTCCATCAGAG TCATGGAAATGATATCAGGATTTAGTAAAAAGTAAAAAACACCATGACAC CAGGACACCATGTACATGAGTCAAACTATGTTGTGAAAAGTGCTATTGAT TTTTATAAAAGATTGTCACAAATGAACTTAAATATCAAATTATATATTAC TATTTTTTTAGGAATGTAAAATTTATCTCTGTGGAACTAAACGCGATTTA TTGGAGCACCAAGACCGTGCAATTGACTATCACGATACAACTGATTATGC AGACACCATAAGTGCAAAGCTATTCGAAACTTCAAGCAAAACAGGAGAAA ATATTGGTTGGTAGAATTCATTTGTTTAGATTTTATGTAATGAAAATGAC TAGAATTATCCCTTTCCATGAAAACAAAGAATTTCAAAGAGTCACTTTCA ATAATATAGAACACTAATTACAAAGTTTCAATCTTTGATTCTTAAAAGAT CTATAGATATCAAGTAATTTATGTACATTTTTAAATCTTTAGAGGAACTG TTCACTGAGATTGCAACTGAATATATGAAAATTGGGATGCCAAGTGGTAA GTTGTCTGAACTAAATTTATTGTATTTATTCCTCTTTGAAGACAAAAGTT AAAGTTTTTGTAACAAAGATATCTTTACAATCATTTAAACTGCTCTACTC GTTTTATCTGATTATTTCAGATTCATTGCTTTTTAAACAATCAAGTGAAC TCTTCTTTAGAGAAAAGTCAGTATAAGCCTTTCATCTTAAAATAATAGAG AATGCGTGATTTGTATCTATACCAAAATCAACAGCTCCGTAATATCTTAT AGGGATAATTATTTTGATCTATTTGTTTTTCGTTTTTTTTCTCATCAGTT GAGGATCCAAACATTGTGAATATGAATCAACGAACAACACAGTCTGAAGG TGGCTGGAAAAAATCATGTTGTGGATGATATTCAAATTCAAATTAGTCAT AAGTGTTATGTGTTCTAGAACCTCTGGTATAACGAGATGTCTGTCCTGTT TCACCTTCAATACAGTGAAATACACGTACTTTGAAGATTTAGTGCATTTC AAAAGGGAACTTTTTAGTGAAGTTTCTTAATTTCTCTGATTTCACAGCCA GATAAACTAGTTGTTGTTTAGAAAAAGGGGTTACGCGCGCTCCAGAACGC TTAAGTACGTTCCTCCACTCTGTTTGCATAGCAAAGACATGTGAGAGTGA CAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00071443TCONS_00071443Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_60supercontigscaffold_60:1422749..1431551 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
RAB24ras-related protein Rab-24 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
32.1 32.49 10.36 8.14 10.21 7.54 22.08 22.25 23.32 18.45 22.52 18.13 28.81 26.43 35.5 30.63 31.44 37.57 35.08 27.23 31.21 28.57 41.45 44.22 36.4 32.48 21.14 16.62 37.93 34.36