XLOC_044541 (gene) - C. hemisphaerica

Overview
NameXLOC_044541
Unique NameXLOC_044541
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_63:112496..118854-

Legend: transcript
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_044541 ID=XLOC_044541|Name=XLOC_044541|organism=Clytia hemisphaerica|type=gene|length=6359bp|location=Sequence derived from alignment at scaffold_63:112496..118854- (Clytia hemisphaerica)
AAAGTTTATCGATAGATTACAACCAGGTGGTAAAAAGGTTGACCACTCTC ATCACGGCTCCAGAGTCTGGTAACCTTCATGAAGACAGAGGTGAGCAATC ACCACAAGCAAGTGACTATACTATCTTTCTGAAAGATCTTACTAAAATTG AAATCATCCTAAAACTACATTGAGTGTTGACAAACAGGTTATCGTATCAT TATTCTAGCAAATGGATTTAAGAAATTAAAGATGGTCGTCTCTATATCGG ATTCCAGATGTAATTGGTGGAACTCTAGAAGATGTACATTATACGATTGG ACATTCAGCTGGTATATTTGATGACACAATCAATATGTTATGTTATTTTG GGGGCGTCACTTTCAGTTAGGAAAGTCTTTGCCCATTTGATGACACAGAT ACAAAGCTAAATAAAAAAGTCTCCAATGGTAGATTTGTCGACAACAAAGC TATCAAAACACGTCTCTACACCAATCTGTGGCCATTTAAAAAAAAACTAG GAATCTGTTTTACATCAACGGCAAACCTAAAATATGAGAGAACTTTATAA AACCGTTTCAGAGATATAAACGTGAACATTAAGCATTTTTTTTAAATATT AGCACAGCCGAACATAATGAACGATTTATGACAGAATTTTCAAAGTTTTG AGGTTAGACCAGACATAGAAGAAGAAACACTGCATTAAGTTCAGAGGCTG GTCGGTGTGACAAATACCATATCAACAAAAAATTACCCATATTTGTCAGG GCAATACTAGATAATCGAAAATAAATCAAACCATGAAACAAGAATTGTGG ATAAAAGGAAAAGAAGTCCTATAGCTTCATAGCAAAAGAGTCGACTGAAA TTCTGGTCAAAAGAAAACACGCTTAAGGAAAGAAATTTTAGTGGAAAGAA ATTTTGGCGAATCTGGCGAATTACCAAAAAATTTCACCAAACTCGCCAAA ATTTCGTTCCGCCAAACTTAAATTAATAGGTTATTCGCAAAAATAAATTC TCGCCAAATTTAATTTTCTTTCAATTAGTCTCTATTTCTCCTAAAAACCC TTTTCTCCTCTTTTTTCAGCTAAAATATTAAACAAAAATGATCCGTTCGC CAAAATTAATTCTCGCCAAATTTAGAAATTTTATTGAATCGCCAAAATTT CTTCCCTTAAAGATATTTCCTTTAAGGTAAGTAGATTGGAATCTACAATT GAAAGCTTGCCAAGTTTGAAGGAGTCAAAATCAAGTTCAAGGGACATAGC AAACGATTTATTGAAGAAGGAATGCTATTTTGATGAAAGGTCACAAGTAC GTGACTCTATTAGGATAGCTGTACCTACACCAAGAACAAGGCATCAGTTG TAATGAGTTCGTCAAACGGTTCGGGAAGGATTTTTAGGAGTACACTATCT ATCGACAAGCAAAACAATTACCGATATCTACAGTCAAGAAAAATATGGAC TCCTCAATGCCACTAAAAAATTTAGGCAAGGAAGTAGCTCTCCGAAAGAC CCCTGTCATTTTAACATAAACAACGTCAAAGCAATATATTCTGCCTAAGA TTGTTACATTTTTATTTTCAGATTAAAATAGAATGACCTTGTCACACTAG GGAAGGGAAAGTTCAATTAAGTTCTATTAATTTTATTCTTCTAAATTCTT CTGTTTTCTTTGACTCAAGATAAACAAGATTTCTTTATAAACTGCTTAGA ATCGTTTTGTCAATAATATAAATCGAAGAAGTCAGCACCTTATGAAGATA ACACCGAGATTAAAGGTCTCCTCAATTTAGCGCGGGGCGACCAAAAACCG ACCCTTATCGTCCACACATACCCAGCACCCATTTTTGCCTAATCCCCCCG GGTTACTGCAATAACGTAGAAAATTTACTTACACTAAAAACACAAAACCT ATGAAATAGGCTAATAATATTTCTTTCGCCTATATTTAGTAAACAAATTG TTTGAAGTGAAAATAAAAATGGGTAGTTCAAACTGAAAAGTTGTTTTTGA CAATGGCAATTACTTGAAGATCACCATTCTTCAAACAATGAATTAGACCT ATTGGACACACAATCAATTACCTTTTATTATACAACCTTGATATTGACAT GCTTTATTTTCTAACGGCAATTCTTTCTCTTTGACCCAGAAACTCAACTA AGGACACCAAGTGACCTTCCCTTTTGTATTTCAAGTGAAGAGAAATGATA GTTTCGCAAGGCGACAACAGATACAAATTTCTTGATGCGCACCGGTTCTT TGGCTGTTAGCGAGGTTAAGCGNGATAGTTTCGCAAGGCGACAACAGATA CAAATTTCTTGACGCGCACCGGTTCTTTGCTGTTAGCGAGGTTAAGCAGG AGTTTATTTTGTACCGTAAGCGCTCTATACCGTGGGATTTTCGCGGGCTA GAGCCCAACTCATGAGGCTGCTTGTGTCCTGTGGATTTTGACCTGTACGT CGTTGGTTGGGGAGTGGATCTAGGCCGAGATTTGAAATTTGGAGCTGAGA AACAAGAAAGCTTTTTAATTTATTTCTTATTATTTACTTCTATTATAATG AATACACAAAAAGTGCAATCATTCTTATCACAAAAGAATGTAAGTTGTAA ATAAATAATCTTTATCACTATTTTATATCAACAACAGCAACTTTTCTTTG CTGTCTCTTCTGCTCATGTTTTTATCTACTATAAAATAAAGTCATATATC TAGCTACTTTTTTGTTGTTTTTTGTTCTGTCAAAATCAAAAACCAATAGA TACTTTGAACAATATGAAACCAAATTTCTTATGTCTTATTTTTTAGTGTT TCTGTGGTGCCATCGTCGTCAAATAAACAATATCATCATGCCACTCAACC ACCACAACTTCCATCAATTTCACAACAACAACAAAAGAAGAAATCTTTAT TTATATTTCCAAATTCGTCTTCAACTACTTCACCACATCAGCCTGTCTTA AACCTTACAACACAACCGCTCAACTTCATACCAGAAAGAAAAATTATCCC CAAAGAATTATACAACGTTCCATCATCTATAAATTCCTCAAAAATTTACC CACCACCGAATATTATTTACCGACGACCGAAAATTATTCGCCAACCACGT AAGATATTTATACAACCACCAAAGATTCATCCACCACCTATCATTATCGA AGTTCACTTACCACCGAAAGTTCATTACCGACCACCAAAAATTATTCGCC GACCACGTATAACATATCAACAACCACCGAAGTTTCACTCGCCGAGCGAA ATTGTTTATGAACCGTCGAAACTTCACCCGTTGTCAACGATTACAGACCT GTCTCCAAAGATATGCCATCTTCCGCTAAAGAAATCGCAAGAAATGATTC AACATTCATCTAAAATTATTCAAATCCCCTCCAAGGTTATCCATCAGTCA CCAAACAATTCACAGCATTTGTCAAAGATTAAGAAAAGACGGTCCAGGAA TATTGAAAAGTCTTCCAAAATAAACCAGTCCGAGAATATTAAAAAGCCTT GCGAGAGTGTCAAAAAGTCATCCGAGATTGTCAAAAAGCCGTCCGAGATT GTTGAAAAGTCATCTGAGATTGTCAAAAAGTCATCCAAGGTTGTCAAAAA GCCGACCGATACTATCGAAAAACCGTCCGATATTATGATAAAGCCATCCG AGAGTATTAAAAATTTATGTTGTAGTGTTCAAGAGCCATCCGAGAATATT GAACAACCATCCAAAAATATTCCGAAATCATACGAGATTGTCCAAATATT CTCAAAAGAGTCGACAGAAAGTATGAGGTTTCAACTTAAATGCCGAAAAT ACCAGATAAATCGAAGCAGAAACAAGATACTGAGTCTGCTACTGAAAATA ATTTTACCAACGTTGTACATCCTGATTATGAATATCATATCGTTGATAAA TCTTACAATACAATATCAAGTGAAAAGCCAGCAGCAACCAGAAAGCAGTG AAAGAATTCTCAACGATGATAAAATATACGACCAGAAAAACCAATGGCAC AACCGAAAGATCTACGAGTATAAGAAAAGAATTTCTGAAAAACAACAAAT TTATCCCAGAAACAAAAATAAACTTCGTTCATTGTGTTGAGTACTCAATA CTTAACCATGCTTCATTTAATGAAAGACGAATATAATATTTAAAGAACTG CACAGAGCACCAAACCAAAAAAAAAAGAAGATTTATATCGAGTCAAAATT GCGTACATTGAGAAGAACAGTTAACCGACTACAACCAAGACAAAATTTAG CGCAGAGAAGTTGTTGAATAAATTCAGAGATGTCGAATAGAATGCAGATT TGTTTACCGAATGAAACTAACAATTACCTAAAGACTGAAATGTTAAAAGA GAAACTGAAATCGGACAAATAGTTTATTGATTTTATGAAATTTTTAAGAG AATAAATTGAGTTTATGTAATATTTATGAATCAGACGATAATTTGTAATT TAGTTACTTTCAAATAAAATATTTCAGCATTAGAAATTGTTAATTATACG TAAAATTTGATGTATAAAGGACCGACATCAAAGATGAAAACAACTTGAAG GCCTGCGAAGATGAAAACTTGACATGCAGTCCAAAATACACCGATCATGT AATGTTTTAATTTAGTGACGAGAACGTCACTTGTCAAACAATGAGGAAGT GAAGTCATATCAGTGTACTAACTAAAATCCAGAGAAGAATAAACCATTAA AACAGTTATGAAAACTCGATAAGTAAACAACCACAATTGAGCACTTAATT GCACCAAAACATCAGCACGAAAACAAAAGCATTAAAAAGTTAGTGATTCC TGAAAGAAAGAAGTAAGCGAAACCACGATCCCGAATTTTTATTGAATTGA CGAGGACGTCACTTGTCGAACGTCGGAGATGTGAAGCTAGAAAACTAATC ATTGATGAATAATGCAAACAGAGACTAGAACTGAGCCAACACGATATTAA TGAACTGAAAGATGAATAGAAATCAATAGAGTGGAGCTCAGGCCCTCGAG CCCAGACCCCTGAATAGGGCGAGCAAACATGAGCGAGAAAAGGAAAGAAA TCGAGGACTTGAAAAGGAGGGCTCGAAGAAAGAGGACTTGGAAAGAAGAG CTCGAAGGAAAAGGACTTGAAAAGGAGAACTTGAAGGAGAAGGACTTGAA CAGAGACTTTCGTTAATTACACGCCAGAGTTACTAATTTATTTGATGTTA TTTATGTTACGCTTATTTGATATTTATTGCTTAATTAAAGAAACAGAATT GATGTTGATTGAAATCTATTAGCGTACCTTTACTACGTGTCCATAAACTT ATCCCCAATAAGGAATACCCTGATCGAAGAAACAGTTAAGTGATCTGAGA GGTCCCCTCAATAACTAAAGGGTGACCCCAATCGCCTAACTTCCCTTCGT CACAATACCAAAGATGAATACAAAAGTAGAACTCTTACAATAAAGATTTA ATAGATTTTATTGCCTTAGGGGAATTTGTAGTGGAATTCACTTTTGATTT AGTGAATTTTGATTTTGATTTTTTAGTTACATTAGTTCTTTGATCAGAGT AAGTTGTATGTATGCGTGTTATGGAAAATATATATTTTTACTAAATGGTT TTAACTGTTTTACTATTTCATATTTTAGAACCTGAAGATGAATCAAAAGT ATTCGAAATATATTGTTTAAAATAAAATAAAATTAAATTGCTGGTCCAAT TTCATTGATATTAATATAAAGTTTCTTAGAAGGAGTCACTGTGTATCGGC AACTTGCCTGTCATCTTACAGACAGTCCTGCTGAGGAAGAAGACGATAGT ATCGTTGAGATTGCAGTTGGTGTCACAATTTCCATCTTCCTCATCTTTGT TGTGATAGTGAGCATGTATGTCTATTTGTAAAGGCATCATAATCGTAAAA TCCTATTAGAGGGCGCATTGTAGTGGAGATATTAGCAATTAATGGTGTAT GGTATGAAAGTGATACTTAAAAGATTTACTCTTAGGTTCCAAAGAAACGG GGGAGGGGTTGGAGAACTTTCGAGATTTTAATAAGCGAGGGACCTAATTA CCAGGGGGAGGGGGTTGGAAATTGCACGTCTGAAAACTCAAAAATAAGGT AAATATAGGCTAAAATGAGGCTATTTAGAGCAAAACAAGAAGGGCATAGG GCGTGAAGGCCCAAAATCAGAAAAAAATTAATCATGAAATATCGAGAAAA TGCCAAAAAACCGGTATTTCCAGCAAATGTTTTTTTTCGAAAATCGGGCT CCGTCACTTTTTGGAAATCACCATTTAGCATCACTGTGGAAAAAATCAGA ACTAATGAGCCAATACCGAGAAAAGCTGGTAACAGACGAACGAACGAACG AACGAACNN
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00071704TCONS_00071704Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_63supercontigscaffold_63:112496..118854 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.29 0.24 0.28 0.24 6.19 3.77 2.8 3.37 1.01 1.42 1.62 0.89 1.07 1 0.66 0.73 0.92 0.78 0.68 0.7 0.94 0.92 0.53 0.78 1.86 2.83 1.38 1.54 1.47 1.35