XLOC_044611 (gene) - C. hemisphaerica

Overview
NameXLOC_044611
Unique NameXLOC_044611
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_64:287147..294076+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_044611 ID=XLOC_044611|Name=XLOC_044611|organism=Clytia hemisphaerica|type=gene|length=6930bp|location=Sequence derived from alignment at scaffold_64:287147..294076+ (Clytia hemisphaerica)
GCTCTAGCTACGGGGTGCACGTGGGGATATGATATGATATATGATATGGA GACACAGTCTTTTGCTTTGGCTGTTTGGTAAATCCCTTCTGCTTCATGTA GCAAACCTTACGAAAATTCCTCAAGTCAAGTATTGTCTTTGGTATGTACG TATTCTTATTGGTTCTCTACTACTAGGTCAGGGTGGTGTTTTCTGACACA CTTGGCAACCACCAAGGCTTCTAGGTTCCCCATATTATTGCAATTTATAA GAATAATCTATTTTTTTGTAGCATGTAGGGGATTATCTCCTGCTgcgttg cagcgaaaatatattcaattcaattcaatttgattcAATTCATCCATCAA GTTTGAAAGCTTTAGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNGTTGTAAAGTGCGACaaatacaa cctgaaaaaaacgttttccaaacgttgtgaaaaacgttttttaaacgttt tttaaacgtttttttgccgGCTGGGTTATTGCAATTTATAAGAATAATCT ATTTTTTTGTAGCATGTAGGGGATTATCTCCTGCTgcgttgcagcgaaaa tatattcaactCAATTCAATTTGATTCAATTCATCCATCAAGTTTGAAAG CTTTAggccagacccgatcaatcgaacttgtcgaaccaatcgaacaatcg aactaatNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNggtttcggttcgatcagttcgataaaccaa ttttgttcgacaagtttgtgccgctccgccaccgtatattagcttcttta caaagccaaattcggaatgttaATCGGAAAATTACTTCGGTAGctgatta cacacttttcctgtatcctttttaGCGCCAGAAGAGGTGGTTTATTGGGG CGGGCAcagtattccgccactcggccgcgtgcgaaatcgcaacagagggg ctacggacttttTTCCGGATAGTACAAATATCCGAGTACAGTAAACGTCA AGCTGTCCAGGAActgtcgaaattggcaatcgcgtgccagaaaaaaagtt tttgcaagcgagggaagatatgagtatttttaatatcatcgaactaatcg aactttttactgaccaaactaatcgaactgctgttgcttcaaaaattgtg agtgttcgattaggttcgattaatttttttaaNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNagtttcgattaatttttttaatcgaactttaa tcgttcgatagagttcgattagttcgattgttcgattgattcgacaagtt cgattgatcgggtctggtttaGGGGAAAAGGGACTTTATTTAAACAGTGA TTCCCGAATGGTGatatttaaaaaacttaaaacatcCTTACAAAACTTGT CCTTTTGATTTCTCATACATTCATTTCTCAAACATTTCTTTATGCGCTCA CTTCCATAATAATTTATGTAATAGTACTTTCGGTCAGCTGGGAtctgcca tattgaattgtatgtaaaaattatggtggccgaattgccgtggtgaaatt cccttagaaagtatatatgcaaaacatatgcaaaaagaaagtattaataa aacttacatgcataaatggcattatattaaagtgtaatcttgtagaagaa agattaaatttgcttcttttgaaatctagaaatatataaTCAAAtttgct catctcttagaacaagcacttcaaaaaaccataacattagacatataaac tcaaactgaaaaatcacccgcgaaggtacaaaaataatccttattcggct gacagtaaattattctcctgggaatagagctgccaaacaatcaaatcaaa acattgatctgaacccgctgaatgtgtgaagtcataattactgctttcag tttgcgtgttttgaaagtttgatgtgtgtactgtcttggtggaatttttt aatggcatgaaaacagaatatgcaatgtctttgagaacaaatttctaaaa ggcttttgttgttctgtaaatatttctttttggNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAGGTTCTCGTGATTA TTGGAAGGATAAATTTGGCCAGGCTCAGTCCCTGATAAGGGAGATGGCAG AAAGAAGCATCCAACTGGAGGAAATTCCTGGCTTTCTGACAATAAAAAAG GGTTAAGCCACATGAAGAAAAGAAAGCAACCACAACTACAAGGGTGACTC AGGTACACGGCTTGACAAGGGCTAAAGAtgtagcaaccaaggtcaaagAA ATCAGGGATGAGAAACTGAAGAAggaaactgaaaaagaagaagcaaAGAA GAGAGAGTAGATCAGAGAAACATTCATGAAATGCAAAACTCAATGTACCT GTTTGCAACAAAAATGCTTGGCTTTAGGATTAAAGCAGTGCCCAGGAGTG CCAAGGTGCTTTAGGATTAAAGCAGTGCACTATTGTATTATCGTTCAGTT TGCAGCAAAGCAAGCTGTAAAGTTAATGGAATCAAACCACTGATGACATT ACCAGCCAAACAACATTCAATCTCTAAACGATTGTTTGAGGAGGATTCAT CATCAGGAAGGGGAGGGATTTGAATCTGAAGAAAGCGAAATGTCCGAAAA TgaaactgatgatgaaagtgATATCCAAAAACTCAAGAATTGCTGGAAAG GCCTGGCATCGCCAACAAAAGAGACTGAAGTCACTGGTAGATGGTATGCT GCCATCTACActatcaagaaaacaaaaaggttgtATATTGGTCGTTTGTT GAATAGATTCTTAAAAGATGAAGATGGCGCTGTTAACTCACTTCAGTTGC ACTGTCTAAAGCCTAAAGTTGGGAGTGGCANNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNTGGTCGTTTGTTGAAGAGATTCTTAAAAGA TGAAGATGGCGCTGTTAACTCACTTCAGTTGCACTGTCTAAAGCCTAAAG TTGGGAGTGGCAAGGTTCTTGAAGACACCCCAGACCATCTTCCAGATACA AGCATTTTCCCAGTTCATGACATCATAGATGGGCCATTAAAGGTCATTCC CATTtgaggaaaaaaatgaacattccaGATCATGATTCAATAGAAAATAT GTTTAACAAAGAAGTATCAAGACTAAACCGTCTAGTTTTAGTAAATATGA TGTAATAATCCATActtttttttaagcttttgagtTATATATGCTAATCA TTATTGTAGTATTTTTgcatagtttttcttgaaaatgtgtCACAAAATTG TATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCTAAAactt gcaatttttctcatttgtacctcaaaacccacaatTTAAAAGTGAGTTTT TTGAGAGCAATTAAAATAAACACATTGCTTACAGCACTTAGAACTTATTT CCTACATTTGTGTTATGTCTAGAGGTaatagaaaacgaaagattGATAGG TTAGTCAATAGCATCAAGTGACttatctgaccatattttgaaaaaaatca aaaattttgaagttagATTTCTAGCGTTAAATCTTGATAAAACATTTTTA CCCAACCAATAATgctcaattttgttttaattaataAAGAAACTATTATA CCAACATAATCTTAAAAAAGTTAtgctaataaaaacattttagatttttc taaaactcctgaaatgaaattgttggttttgaggtacctgtgggttttgt ggtacatatctgtatgttttgcatattttccaactaaatccaagcACGGC TTTtttgttcctctatttttgcatacaattcaagatggcggatggaaagc cGAAAAGGTCTATCATATGTCACCAAAATTCATGCCATCAAAATCCTGGC CACCATCAAAATCCTGGCCACCATCAAAATCAACACCAGGAACAACCTAG CGCTTTACCACCACCACAAATATGATTGATACTGCCACGACCCCAACCAC AACCTCAGTATGCACAACTACCAATAATGATTTATCAGATCAATATATGA TTTATTTTTACCagttaggcgagaccaatttaatttattaTTCTACGGGC AGATCTTTAGAAAagtatgggtcggtcggt
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00071863TCONS_00071863Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_64supercontigscaffold_64:287147..294076 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
8.37 7.15 11.71 8.39 15.59 11.72 9.57 10.33 8.49 13.32 13.28 12.75 11.91 12.75 17.06 17.25 7.7 6.01 2.26 4.3 5.53 3.9 9.82 8.16 1.51 4.75 3.13 3.73 7.03 5.82