TCONS_00004967-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00004967-protein
Unique Name	TCONS_00004967-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	301

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00004967-protein ID=TCONS_00004967-protein|Name=TCONS_00004967-protein|organism=Clytia hemisphaerica|type=polypeptide|length=301bp
MEGESLVFCALSWYLFSTCHTVVDQNFYLDYPCPLTISLSHMFVNQFGLA
LVAYLAGADQILLSKSHIKPVLCLAAFKVAVSTFSHYTALFLTVPLMEAL
KAMSPIFVVTVTKFCFGASYSNGVYFSLPLMITGAVSATLTQTKIVYNGL
LTSFLMVCASQSQNIYLKQSYHNVSLHPLALLSNVHMFAFLMILPIWIVV
DLPVLMASEMLHEKPLEFVLTFLVQGCLSTVTHTLKGFLLPNCSSLTYSV
MENGKSLTKVIIGFVRYQKPTGVINVLGTFVAVFGVFCYAHARNDKKVKS
N

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_002815	XLOC_002815	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00004967	TCONS_00004967	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR004853	Sugar_P_trans_dom

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004853	Sugar phosphate transporter domain	PFAM	PF03151	TPT	coord: 7..289 e-value: 4.4E-31 score: 108.2

Blast

[Close]

BLAST of TCONS_00004967-protein vs. Swiss-Prot (Human)
Match: S35E1 (Solute carrier family 35 member E1 OS=Homo sapiens GN=SLC35E1 PE=1 SV=2)

HSP 1 Score: 92.4337 bits (228), Expect = 4.079e-21
Identity = 83/320 (25.94%), Postives = 140/320 (43.75%), Query Frame = 0

Query:    2 EGESLVFCALSWYLFSTCHTVVDQNFYLDYPCPLTISLSHMFVNQFGLA--LVAYL---------------AGADQILLSKSHIKPVLCLAAFKVAVSTFSHYTALFLTVPLMEALKAMSPIFVVTVTKFCFGASYSNGVYFSLPLMITGAVSATLTQTKIVYNGLLTSFLMVCASQSQNIYLKQSYHNVSLHPLALLSNVHMFAFLMILPIWIVVDLPVLMASEML---HEKPLEFVLTFLVQGCLSTVTHTLKGFLLPNCSSLTYSVMENGKSLTKVIIGFVRYQKPTGVINVLGTFVAVFGVFCYAHARNDKKVKSN 301
            EG  +    L WY  S    VV++     +P P+T+SL H+     GL   L A+                  +  +L  + + + VL LA  K   S  +H +   + V     +KA  PI+VV +++       S  VY SL  +I+G + AT+T+      GL+++         QNI+ K+   +  +H L LL+ +   A   ++P W++VDL   + S  L   ++ P   +L   V G  +   + +   +L   S L+YSV    K +  + +  +  + P    NVLG   A+ GVF Y   + D   ++ 
Sbjct:   26 EGARVAALCLLWYALSAGGNVVNKVILSAFPFPVTVSLCHILALCAGLPPLLRAWRVPPAPPVSGPGPSPHPSSGPLLPPRFYPRYVLPLAFGKYFASVSAHVSIWKVPVSYAHTVKATMPIWVVLLSRIIMKEKQSTKVYLSLIPIISGVLLATVTELSFDMWGLVSALAATLCFSLQNIFSKKVLRDSRIHHLRLLNILGCHAVFFMIPTWVLVDLSAFLVSSDLTYVYQWPWTLLL-LAVSGFCNFAQNVIAFSILNLVSPLSYSVANATKRIMVITVSLIMLRNPVTSTNVLGMMTAILGVFLYNKTKYDANQQAR 344

The following BLAST results are available for this feature:

BLAST of TCONS_00004967-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00004967-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
S35E1	4.079e-21	25.94	Solute carrier family 35 member E1 OS=Homo sapiens...	[more]

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TCONS_00004967-protein (polypeptide) - C. hemisphaerica