TCONS_00005036-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00005036-protein
Unique NameTCONS_00005036-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length381

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00005036-protein ID=TCONS_00005036-protein|Name=TCONS_00005036-protein|organism=Clytia hemisphaerica|type=polypeptide|length=381bp
MMAVEKRSAVGDKAKEIEGKAKEIWLQIETFFINLWNWSLKHKEIAIPAA
VGILLVLVLFFSCCCYCCCCRKKTRKKIKEKLKMKGVKPSKMLRRIQPGK
RVKRVMEEVGSMTFRLKYNQSTEILTVKVIESNDIPVRDLSGHSYSFVEV
KLLPLHKDSPIEYKTALVRPATFNPSFGDGFTFCIPQKEAKQQKLCLTQY
EKNRFSQKDGIGQIEMDLKSVLTTKEEEYIKKLYPYDPLIGVEKETGAVY
LSMELDRDIWELKIEIEEADILPEDEDKEKCTSYVTLAILDKEGKRLEKR
KTNTCPGTLQPEFDEVITFSVPDGSLLDTQILIKLKSKRFLLPSKLIGQF
IITPESESWKKLLEDNALKARWFQMYHKPSS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_002851XLOC_002851Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00005036TCONS_00005036Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001565Synaptotagmin
IPR000008C2_dom
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016020 membrane
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001565SynaptotagminPRINTSPR00399SYNAPTOTAGMNcoord: 112..127
score: 32.54
coord: 127..140
score: 24.16
coord: 186..201
score: 18.93
coord: 206..216
score: 34.49
IPR000008C2 domainSMARTSM00239C2_3ccoord: 124..230
e-value: 0.0039
score: 26.4
coord: 261..371
e-value: 6.8E-6
score: 35.6
IPR000008C2 domainGENE3D2.60.40.150coord: 105..235
e-value: 1.1E-19
score: 70.0
IPR000008C2 domainPFAMPF00168C2coord: 124..227
e-value: 8.7E-12
score: 45.2
coord: 260..374
e-value: 3.6E-10
score: 39.9
IPR000008C2 domainGENE3D2.60.40.150coord: 240..381
e-value: 4.5E-16
score: 58.2
IPR000008C2 domainPROSITEPS50004C2coord: 125..215
score: 11.581
IPR000008C2 domainPROSITEPS50004C2coord: 261..351
score: 9.243
IPR000008C2 domainSUPERFAMILY49562C2 domain (Calcium/lipid-binding domain, CaLB)coord: 105..229
IPR000008C2 domainSUPERFAMILY49562C2 domain (Calcium/lipid-binding domain, CaLB)coord: 245..379
NoneNo IPR availableGENE3D1.20.5.900coord: 45..88
e-value: 0.001
score: 18.5

Blast
[Close]
BLAST of TCONS_00005036-protein vs. Swiss-Prot (Human)
Match: SYT7 (Synaptotagmin-7 OS=Homo sapiens GN=SYT7 PE=1 SV=3)

HSP 1 Score: 96.6709 bits (239), Expect = 4.373e-22
Identity = 80/276 (28.99%), Postives = 136/276 (49.28%), Query Frame = 0 
Query:  107 EEVGSMTFRLKYNQSTEILTVKVIESNDIPVRDLSGHSYSFVEVKLLPLHKDSPIEYKTALVRPATFNPSFGDGFTF-CIPQKEAKQQKLCLTQYEKNRFSQKDGIGQIEMDLKSVLTTKEEEYIKKLYPYDPLIGVEKETGAVYLSMELDRDIWELKIEIEEADILPEDEDKEKCTSYVTLAILDKEGKRLEKRKTNTCPGTLQPEFDEVITFSVPDGSLLDTQILIKLKSKRFLLPSKLIGQFIIT-----PESESWKKLL-EDNALKARWFQM 375
            E +G + F + YN     LTVK++++ ++P +D SG S  FV++ LLP  K   +E K   V+    NP + + F F   P ++  Q+ L L   + +RFS+ D IG++ + L  V  T+ + + K L P     G     G + LS+  +     + + I +A  L   +       YV + ++ K+ KR+EK+KT T    L P F+E   F +P   L +T I+I +  K  L  + +IG+  ++      E + WK ++       A+W Q+
Sbjct:  134 ENLGRIQFSVGYNFQESTLTVKIMKAQELPAKDFSGTSDPFVKIYLLP-DKKHKLETK---VKRKNLNPHWNETFLFEGFPYEKVVQRILYLQVLDYDRFSRNDPIGEVSIPLNKVDLTQMQTFWKDLKPCSDGSG---SRGELLLSLCYNPSANSIIVNIIKARNLKAMDIGGTSDPYVKVWLMYKD-KRVEKKKTVTMKRNLNPIFNESFAFDIPTEKLRETTIIITVMDKDKLSRNDVIGKIYLSWKSGPGEVKHWKDMIARPRQPVAQWHQL 401
The following BLAST results are available for this feature:
BLAST of TCONS_00005036-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SYT74.373e-2228.99Synaptotagmin-7 OS=Homo sapiens GN=SYT7 PE=1 SV=3[more]
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