TCONS_00005072-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00005072-protein
Unique Name	TCONS_00005072-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	419

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00005072-protein ID=TCONS_00005072-protein|Name=TCONS_00005072-protein|organism=Clytia hemisphaerica|type=polypeptide|length=419bp
MVGIKNVPDVFAPLLQDRKLADXEDGRLFVLHIPEMVGIKNVPDVFAPLL
QDRKLADVKSPISFFVLGDDGLLHVVAIQRNPVQTSEVDTSESSNWLLAK
GEAEMASDLYCQAKIHLGEVHFVSTIYCLSFRRHLSTKHPLYDFFKHHCE
GTVPHITTVFETLTTPNAAGSVIYGTGNQGFLDLSQKAFAERDYESNTYE
DFIEGNGLDDEDIKYYPFRDDVKVIMKEYEIFIDDIIKAYYRRGRIHRDA
ELQSWANELSPEGTVQPDAGRGKMKGFPAKFETCDQLRTFLKRFLWINLF
HTSANYPDYRDFMPTSPTRLYQNLDGTDLPLLKALTGKLYNVQYMMFRGL
LANFRVNRIFSYWKDITNPTYRRIVRKAFYRLNTIVQKKLEARNAERKAK
NQLGYQIMEPKWLTNSVHI

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_002868	XLOC_002868	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00005072	TCONS_00005072	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR013819	LipOase_C

Vocabulary: **Molecular Function**
Term	Definition
GO:0046872	metal ion binding
GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen

Vocabulary: **Biological Process**
Term	Definition
GO:0055114	oxidation-reduction process

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055114	oxidation-reduction process
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.20.245.10		coord: 109..419 e-value: 1.8E-42 score: 145.2
None	No IPR available	GENE3D	3.10.450.60		coord: 9..106 e-value: 3.6E-4 score: 20.2
IPR013819	Lipoxygenase, C-terminal	PFAM	PF00305	Lipoxygenase	coord: 81..408 e-value: 6.7E-15 score: 54.5
IPR013819	Lipoxygenase, C-terminal	PROSITE	PS51393	LIPOXYGENASE_3	coord: 1..419 score: 29.398
IPR013819	Lipoxygenase, C-terminal	SUPERFAMILY	48484	Lipoxigenase	coord: 24..419

Blast

[Close]

BLAST of TCONS_00005072-protein vs. Swiss-Prot (Human)
Match: LOXE3 (Hydroperoxide isomerase ALOXE3 OS=Homo sapiens GN=ALOXE3 PE=1 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 5.422e-19
Identity = 95/389 (24.42%), Postives = 150/389 (38.56%), Query Frame = 0

Query:   58 VKSPISFFVLGDDGLLHVVAIQ--RNPVQTSEV--DTSESSNWLLAKGEAEMASDLYCQAKIHLGEVHFVSTIYCLSFRRHLSTKHPLYDFFKHHCEGTVPHITTVFETLTTPNAAGSVIYGTGNQGFLDLSQKAFAERDYESNTYEDFIEGNGLDDEDIKYYPFRDDVKVIMKEYEIFIDDIIKAYYRR-GRIHRDAELQSWANELSPEGTVQPDAGRGKMKGFPAKFETCDQLRTFLKRFLWINLFHTSANYP-------DYRDFMPTSPTRLYQ---NLDGTDLPLLKALTGKLYNVQYMMFRGLLANFRVNRIFSYWKDITNPTYRR---------IVRKAFYRLNTIVQKKLEARNAERKAKNQ---LGYQIMEPKWLTNSVHI 419
            V +P+    L   G L  +AIQ  + P   S +   T    +WLLAK     +  L  +   H    H +   + ++  R L   HP+Y     H   T+   T    TL  P      +   G QG + L     A   Y +    D +   G+    I  Y +RDD   I    E F+ +I+  YY     + +D+ELQ+W  E+  +  +    GR +  GFP++  T  ++  FL       +F+ SA +        D+  +MP +P+ + Q      GT    LK     L  V          N   N +  +W     P  +R            +A  R     Q +L   + + + +NQ   L Y  ++P  + NSV I
Sbjct:  346 VAAPLCLLWLSPQGALVPLAIQLSQTPGPDSPIFLPTDSEWDWLLAKTWVRNSEFLVHENNTHFLCTHLLCEAFAMATLRQLPLCHPIYKLLLPHTRYTLQVNTIARATLLNPEGLVDQVTSIGRQGLIYLMSTGLAHFTYTNFCLPDSLRARGV--LAIPNYHYRDDGLKIWAAIESFVSEIVGYYYPSDASVQQDSELQAWTGEIFAQAFL----GR-ESSGFPSRLCTPGEMVKFLTAI----IFNCSAQHAAVNSGQHDFGAWMPNAPSSMRQPPPQTKGTT--TLKTYLDTLPEV----------NISCNNLLLFWLVSQEPKDQRPLGTYPDEHFTEEAPRRSIAAFQSRLAQISRDIQERNQGLALPYTYLDPPLIENSVSI 711

The following BLAST results are available for this feature:

BLAST of TCONS_00005072-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00005072-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
LOXE3	5.422e-19	24.42	Hydroperoxide isomerase ALOXE3 OS=Homo sapiens GN=...	[more]

You are here

TCONS_00005072-protein (polypeptide) - C. hemisphaerica