TCONS_00005276-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00005276-protein
Unique NameTCONS_00005276-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length575

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00005276-protein ID=TCONS_00005276-protein|Name=TCONS_00005276-protein|organism=Clytia hemisphaerica|type=polypeptide|length=575bp
MAAPPYPFSQQASFNTGAAPPNAPYTNPQSKIELKISCRNLVDLDVFSKS
DPFCVFYMQGATKGSWREIGRTEVIWDNLNPDFVKSFIVDYFFEEQQVVK
FEIYDADSDSRDLSQHDYIGKLVTSVGSIVGENGGRIKHQLQVPSAKDFE
RNDKYTRKSPGTIIVTAEEVSSNKDVVTMQFCGKKLDKMDFFGKSDPFLT
FERCSEDGSYSVVHKTEVIKNTLNPTWNAFTVKSQTLCNGDPQRTILVKC
WDWERNGSHRIIGQFETTQNDLAGYGANRPSSFDLIHPEKKMKKKYKNSG
TIHILSCKVVQKPSFLDYIRGGLELAFVVAIDFTASNGDPRTPQSLHYSS
PNKPSDYVQALQALGGVIEDYDTDKLFPAYGFGAKLPPNWNVSHEFALNF
NPANPHCHGIDGVIAAYYNSIANVQLYGPTNFSPVINSASSIARQSMRQG
ITQYFILLIITDGIITDMERTKEAIVEAAKLPMSIIIVGVGNADFDAMEV
LDGDDVRLTDCRGRVAERDIVQFVPFRDYMKNSTYDPMSGVRLAKDVLHE
LPDQLVESMEKHGVKPNPPPPAYSP
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_003009XLOC_003009Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00005276TCONS_00005276Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002035VWF_A
IPR000008C2_dom
IPR010734Copine
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002035von Willebrand factor, type ASMARTSM00327VWA_4coord: 324..523
e-value: 1.2E-13
score: 61.3
IPR002035von Willebrand factor, type AGENE3D3.40.50.410coord: 321..514
e-value: 1.1E-9
score: 37.9
IPR002035von Willebrand factor, type ASUPERFAMILY53300vWA-likecoord: 325..506
IPR000008C2 domainSMARTSM00239C2_3ccoord: 175..281
e-value: 4.9E-7
score: 39.4
coord: 31..138
e-value: 5.3E-8
score: 42.6
IPR000008C2 domainGENE3D2.60.40.150coord: 30..156
e-value: 2.2E-19
score: 69.1
IPR000008C2 domainGENE3D2.60.40.150coord: 173..311
e-value: 3.8E-17
score: 62.1
IPR000008C2 domainPFAMPF00168C2coord: 36..130
e-value: 1.9E-12
score: 47.3
coord: 182..270
e-value: 9.1E-12
score: 45.1
IPR000008C2 domainPROSITEPS50004C2coord: 36..123
score: 10.516
IPR000008C2 domainPROSITEPS50004C2coord: 159..266
score: 9.716
IPR000008C2 domainSUPERFAMILY49562C2 domain (Calcium/lipid-binding domain, CaLB)coord: 27..139
IPR000008C2 domainSUPERFAMILY49562C2 domain (Calcium/lipid-binding domain, CaLB)coord: 161..293
IPR010734CopinePFAMPF07002Copinecoord: 345..566
e-value: 2.5E-85
score: 285.3
IPR010734CopineCDDcd01459vWA_copine_likecoord: 298..555
e-value: 9.43709E-108
score: 325.48
NoneNo IPR availableCDDcd04048C2A_Copinecoord: 30..138
e-value: 3.88976E-55
score: 182.769
NoneNo IPR availableCDDcd04047C2B_Copinecoord: 175..287
e-value: 1.01136E-53
score: 178.528

Blast
[Close]
BLAST of TCONS_00005276-protein vs. Swiss-Prot (Human)
Match: CPNE8 (Copine-8 OS=Homo sapiens GN=CPNE8 PE=1 SV=2)

HSP 1 Score: 612.068 bits (1577), Expect = 0.000e+0
Identity = 302/540 (55.93%), Postives = 403/540 (74.63%), Query Frame = 0 
Query:   28 PQSKIELKISCRNLVDLDVFSKSDPFCVFYMQGATKGSWREIGRTEVIWDNLNPDFVKSFIVDYFFEEQQVVKFEIYDADSDSRDLSQHDYIGKLVTSVGSIVGENGGRI-KHQLQVPSAKDFERNDKYTRKSPGTIIVTAEEVSSNKDVVTMQFCGKKLDKMDFFGKSDPFLTFERCSEDGSYSVVHKTEVIKNTLNPTWNAFTVKSQTLCNGDPQRTILVKCWDWERNGSHRIIGQFETTQNDLAGYGANRPSSFDLIHPEKKMKKK-YKNSGTIHILSCKVVQKPSFLDYIRGGLELAFVVAIDFTASNGDPRTPQSLHYSSPNKPSDYVQALQALGGVIEDYDTDKLFPAYGFGAKLPPNWNVSHEFALNFNPANPHCHGIDGVIAAYYNSIANVQLYGPTNFSPVINSASSIARQSMRQGITQYFILLIITDGIITDMERTKEAIVEAAKLPMSIIIVGVGNADFDAMEVLDGDDVRLTDCRGRVAERDIVQFVPFRDYMKNSTYDPMSGVRLAKDVLHELPDQLVESMEKHGVK 565
            P +++E+ +SCRNL+D D FSKSDP CV Y+QG     WRE GRTEVI + LNPDFV+ FI+DYFFEE++ ++F++YD DS S +LS+HD++G++  ++G IVG  G R+ K  + +P             K  GTII+TAEE++  +D V MQFC  KLDK DFFGKSDPFL F R +EDGS+++ HKTEV+KNTLNP W AF +  + LCNGD  RTI V+ +DW+R+GSH  IG+F T+  +L+  G ++ + +++++P+KK KKK Y NSGT+ +LS  V  + SFLDYI+GG ++ F VAIDFTASNG+P  P SLHY +P + + Y  AL+A+G +++DYD+DK+FPA GFGAKLPP+  +SHEFALN NP NP+C GI+GV+ AYY S+ +VQLYGPTNF+PVIN  +  A  S++ G +QYF+LLI+TDG+I+DM +TKE+IV A+KLPMSIIIVGVG A+FDAM  LDGDDVR++  RG+ AERDIVQFVPFRDY+  S    +S  RLAKDVL E+P+Q +  M   G+K
Sbjct:   22 PATRVEVSVSCRNLLDRDTFSKSDPICVLYVQGVGNKEWREFGRTEVIDNTLNPDFVRKFILDYFFEERENLRFDLYDVDSKSPNLSKHDFLGQVFCTLGEIVGSQGSRLEKPIVGIPG------------KKCGTIILTAEELNCCRDAVLMQFCANKLDKKDFFGKSDPFLVFYRSNEDGSFTICHKTEVVKNTLNPVWQAFKISVRALCNGDYDRTIKVEVYDWDRDGSHDFIGEFTTSYRELS-RGQSQFNVYEVVNPKKKGKKKKYTNSGTVTLLSFLVETEVSFLDYIKGGTQINFTVAIDFTASNGNPAQPTSLHYMNPYQLNAYGMALKAVGEIVQDYDSDKMFPALGFGAKLPPDGRISHEFALNGNPQNPYCDGIEGVMEAYYRSLKSVQLYGPTNFAPVINHVARYA-SSVKDG-SQYFVLLIVTDGVISDMAQTKESIVNASKLPMSIIIVGVGPAEFDAMVELDGDDVRVSS-RGKYAERDIVQFVPFRDYIDRSGNHILSMARLAKDVLAEIPEQFLSYMRARGIK 545
The following BLAST results are available for this feature:
BLAST of TCONS_00005276-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CPNE80.000e+055.93Copine-8 OS=Homo sapiens GN=CPNE8 PE=1 SV=2[more]
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