TCONS_00005760-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00005760-protein
Unique NameTCONS_00005760-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length291

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00005760-protein ID=TCONS_00005760-protein|Name=TCONS_00005760-protein|organism=Clytia hemisphaerica|type=polypeptide|length=291bp
MADRLFMYSWYHGEISRPTSEEILLNQSPGLFLVRDSTSCKGGYVLSVSE
NRKVSHYIITNRQGQYHIGDQVFNDLPDIVEFYKRHFLDTTTLVEPAARQ
VEPEPEAPAARAPPQESIKVKAKYNFPGNDPEDLPFRKNDNLTILKKEED
QWWLARDSQGKEGMIPANYVEVVRTTSTVNTMSNSSTSTRVPSITTGSGG
YTTPNNTSVPSTVPTATTVPAIAEAIQDRVPSIYDPYELKFQKGERILVL
KMREDGIWEGQLKNGKKGIFPFRYVKIVSSSPQDVDAWNNS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_003271XLOC_003271Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00005760TCONS_00005760Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001452SH3_domain
IPR000980SH2
IPR011511SH3_2
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001452SH3 domainPRINTSPR00452SH3DOMAINcoord: 161..173
score: 45.02
coord: 118..128
score: 26.67
coord: 132..147
score: 31.18
coord: 149..158
score: 30.82
IPR001452SH3 domainSMARTSM00326SH3_2coord: 221..279
e-value: 3.1E-10
score: 50.0
coord: 118..174
e-value: 3.4E-19
score: 79.8
IPR001452SH3 domainPFAMPF00018SH3_1coord: 121..167
e-value: 6.9E-16
score: 57.5
IPR001452SH3 domainPROSITEPS50002SH3coord: 218..280
score: 10.649
IPR001452SH3 domainPROSITEPS50002SH3coord: 115..175
score: 17.232
IPR001452SH3 domainSUPERFAMILY50044SH3-domaincoord: 104..195
IPR001452SH3 domainSUPERFAMILY50044SH3-domaincoord: 209..284
IPR000980SH2 domainPRINTSPR00401SH2DOMAINcoord: 29..39
score: 53.93
coord: 10..24
score: 42.76
coord: 72..86
score: 30.74
coord: 41..52
score: 43.26
coord: 53..63
score: 35.86
IPR000980SH2 domainSMARTSM00252SH2_5coord: 8..89
e-value: 7.2E-27
score: 105.3
IPR000980SH2 domainPFAMPF00017SH2coord: 10..83
e-value: 2.2E-21
score: 75.6
IPR000980SH2 domainGENE3D3.30.505.10coord: 1..105
e-value: 1.3E-29
score: 101.8
IPR000980SH2 domainPROSITEPS50001SH2coord: 10..97
score: 19.658
IPR000980SH2 domainSUPERFAMILY55550SH2 domaincoord: 4..87
NoneNo IPR availableGENE3D2.30.30.40coord: 107..142
e-value: 9.9E-12
score: 43.7
NoneNo IPR availableGENE3D2.30.30.40coord: 143..214
e-value: 5.4E-14
score: 51.1
NoneNo IPR availableGENE3D2.30.30.40coord: 215..287
e-value: 4.9E-15
score: 54.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 181..212
NoneNo IPR availableCDDcd11758SH3_CRK_Ncoord: 118..171
e-value: 1.49714E-29
score: 106.678
IPR011511Variant SH3 domainPFAMPF07653SH3_2coord: 225..277
e-value: 7.2E-10
score: 38.3

Blast
[Close]
BLAST of TCONS_00005760-protein vs. Swiss-Prot (Human)
Match: CRKL (Crk-like protein OS=Homo sapiens GN=CRKL PE=1 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 8.991e-72
Identity = 132/303 (43.56%), Postives = 181/303 (59.74%), Query Frame = 0 
Query:    9 SWYHGEISRPTSEEILLNQSPGLFLVRDSTSCKGGYVLSVSENRKVSHYIIT---NRQGQYHIGDQVFNDLPDIVEFYKRHFLDTTTLVEPAARQVEPEPEAPAARAPPQESIK-----VKAKYNFPGNDPEDLPFRKNDNLTILKKEEDQWWLARDSQGKEGMIPANYVE-VVRTT---STVNTMSNS-------------STSTRVPSITTGSGGYTTPNNTSVPSTVPTATTVPAIAEAIQDRVPSIYDPYELKFQKGERILVLKMREDGIWEGQLKNGKKGIFPFRYVKIVSSSPQDVD 286
            +WY G +SR  ++  L  Q  G+FLVRDS++C G YVLSVSEN +VSHYII    NR+  + IGDQ F+ LP ++EFYK H+LDTTTL+EPA R   P P   +  AP   + +     V+  Y+FPGND EDLPF+K + L I++K E+QWW AR+  G+ GMIP  YVE +VR++      N  SNS              T+T +P+++   G   TP        +P+    P  A+AIQ RVP  YD   L  + G+ + V +M  +G WEG++ NG+KG+FPF +VKI    PQ+ D
Sbjct:   13 AWYMGPVSRQEAQTRLQGQRHGMFLVRDSSTCPGDYVLSVSENSRVSHYIINSLPNRR--FKIGDQEFDHLPALLEFYKIHYLDTTTLIEPAPRY--PSPPMGSVSAPNLPTAEDNLEYVRTLYDFPGNDAEDLPFKKGEILVIIEKPEEQWWSARNKDGRVGMIPVPYVEKLVRSSPHGKHGNRNSNSYGIPEPAHAYAQPQTTTPLPAVSGSPGAAITP--------LPSTQNGPVFAKAIQKRVPCAYDKTALALEVGDIVKVTRMNINGQWEGEV-NGRKGLFPFTHVKIF--DPQNPD 300
The following BLAST results are available for this feature:
BLAST of TCONS_00005760-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CRKL8.991e-7243.56Crk-like protein OS=Homo sapiens GN=CRKL PE=1 SV=1[more]
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