TCONS_00006019-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00006019-protein
Unique NameTCONS_00006019-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length423

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00006019-protein ID=TCONS_00006019-protein|Name=TCONS_00006019-protein|organism=Clytia hemisphaerica|type=polypeptide|length=423bp
MNNKKKKSDLYGFLTAFGYNGPMHGEAQGRYRTSYEVRKRKEANGIKPYR
EIDLADENALKMLESETDTVVFSSGNDTGSLIAFKKDNKTDLFQMGRSTE
PLIDYVVVDTIPGNKENLEQHLVQSTISRYAARFTVERSSPHRTRIYAAA
FNAKRQIVLGEHAPQWSNGKKFSDGLTTNGVLLCHPKGNWGKEMKPGVWR
EVSVSGEMFGLRHCRSAKHRGKTSDCSNVLQDGTLIDLCGVVMLWRTCNG
LKYSPSRSDLLEKREYLNSMKVQCPVGLATLRFDNKTNDKESLPYVYTTC
GHVHGYHTWGARPGLDSIIQDNSNIFDDIRQCPYCKEKGVYVRLEVGLEP
NFYIDNGPLTHAFVPCGHMTTELTARYWSRVLIPLGKDKFHMACPFCALP
LEGEGFIKLIYQTQTEIKIPISV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_003435XLOC_003435Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00006019TCONS_00006019Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR006800Pellino_fam
Vocabulary: Biological Process
TermDefinition
GO:0008063Toll signaling pathway
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008063 Toll signaling pathway
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 339..408
e-value: 0.16
score: 11.0
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 270..338
e-value: 0.095
score: 11.8
IPR006800Pellino familyPFAMPF04710Pellinocoord: 4..414
e-value: 6.8E-140
score: 466.2

Blast
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BLAST of TCONS_00006019-protein vs. Swiss-Prot (Human)
Match: PELI2 (E3 ubiquitin-protein ligase pellino homolog 2 OS=Homo sapiens GN=PELI2 PE=1 SV=1)

HSP 1 Score: 367.466 bits (942), Expect = 9.661e-125
Identity = 181/408 (44.36%), Postives = 258/408 (63.24%), Query Frame = 0 
Query:   11 YGFLTAFGYNGPMHGEAQGRYRTSYEVRKRKEANGIKPYREIDLADENALKMLESE-TDTVVFSSGNDTGSLIAFKKDNKTDLFQMGRSTEPLIDYVVVDTIPGNKENLEQHLVQSTISRYAARFTVERSSPHRTRIYAAAFNAKRQIVLGEHAPQWSNGKKFSDGLTTNGVLLCHPKGNWGKEMKPGVWREVSVSGEMFGLRHCRSAKHRGKTSDC-SNVLQDGTLIDLCGVVMLWRTCNGLKYSPSRSDLLEKREYLNSMKVQCPVGLATLRF---DNKTNDKESLPYVYTTCGHVHGYHTWGARPGLDSIIQDNSNIFDDIRQCPYCKEKGVYVRLEVGLEPNFYIDNGPLTHAFVPCGHMTTELTARYWSRVLIPLGKDKFHMACPFCALPLEGE-GFIKLIYQ 412
            YG L   GYNG +    +GR ++ + + KR +ANG+KP     ++   A K +  +   ++ ++   +   ++ +  D  TD+FQ+GRSTE  ID+VV DTI G++   E  + QSTISR+A R   +R+ P+  RI+AA F++ + I LGE A +W N     DGLTTNGVL+ HP+G + +E +PGVWRE+SV G+++ LR  RSA+ RGK  +  +NVLQDG+LIDLCG  +LWRT +GL ++P++  +   R+ +N+ + QCPVGL TL F   + K   +E  P+ Y +CGHVHGYH WG R          S+   + R+CP C+  G YV L +G E  FY+D GP THAF PCGH+ +E +A+YWS++ +P G   FH ACPFCA  L GE   IKLI+Q
Sbjct:   19 YGELVVLGYNGALPNGDRGRRKSRFALYKRPKANGVKPSTVHVISTPQASKAISCKGQHSISYTLSRNQTVVVEYTHDKDTDMFQVGRSTESPIDFVVTDTISGSQNTDEAQITQSTISRFACRIVCDRNEPYTARIFAAGFDSSKNIFLGEKAAKWKNPDGHMDGLTTNGVLVMHPRGGFTEESQPGVWREISVCGDVYTLRETRSAQQRGKLVESETNVLQDGSLIDLCGATLLWRTADGLFHTPTQKHIEALRQEINAARPQCPVGLNTLAFPSINRKEVVEEKQPWAYLSCGHVHGYHNWGHR----------SDTEANERECPMCRTVGPYVPLWLGCEAGFYVDAGPPTHAFTPCGHVCSEKSAKYWSQIPLPHGTHAFHAACPFCATQLVGEQNCIKLIFQ 416
The following BLAST results are available for this feature:
BLAST of TCONS_00006019-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PELI29.661e-12544.36E3 ubiquitin-protein ligase pellino homolog 2 OS=H... [more]
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