TCONS_00006139-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00006139-protein
Unique NameTCONS_00006139-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length581

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00006139-protein ID=TCONS_00006139-protein|Name=TCONS_00006139-protein|organism=Clytia hemisphaerica|type=polypeptide|length=581bp
SVLTKQLEMNVIVAVKQYITKMIDDAGPGMKVLLMDKETTGIVSMVYAQS
EILQKEVFLFERVDTQARETMKHLKAICFVRPTKENIEALKKELKIPKYG
SYYIYFSNAILKNYVKQLAESDDQEVVKEVHEFYADFFAISPHVFSLNIV
GCAKGKNWFGDRQDRVTDGLIAVLLSLRKKPIIRYQTASSMCKRLAESVM
LKMGQESGLFEFRQSDISPLLLIVDRSDDPVTPLLNQWTYQAMVHELLSI
KNNRIDLSKVPGISRELKEVVLSAEHDDVYLDNMYKNFGEIGINIKQLMN
EFQKNAKSNQKLDSVADMKAFVENYPQFRKMSGTVSKHVTVVSELSRLVG
EHCLLELSELEQDMSAKSDHSMHLQAIKKLLANPKVRDIDAVRLVLLYIL
RYEKTQGNDAGGLRNDLKKRGVSDTMCKIVYNMVEYAGATVRTSDIFGQN
KNALSMTKKFMKGLKGVENIYTQHKPLLHETLDNLIKGKLPDRLFPYLGK
DTFRDRPQDVVVFMVGGATYEEALTVYELNRANPGVRIILGGTSIHNTES
FLEEIKESTMITDTMTSSTSVAYSKSSRYEV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_003505XLOC_003505Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00006139TCONS_00006139Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001619Sec1-like
Vocabulary: Biological Process
TermDefinition
GO:0006904vesicle docking involved in exocytosis
GO:0016192vesicle-mediated transport
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006904 vesicle docking involved in exocytosis
biological_process GO:0016192 vesicle-mediated transport
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001619Sec1-like proteinPFAMPF00995Sec1coord: 31..554
e-value: 3.2E-131
score: 439.3
IPR001619Sec1-like proteinPIRSFPIRSF005715VPS45_Sec1coord: 9..566
e-value: 1.1E-171
score: 570.3
IPR001619Sec1-like proteinSUPERFAMILY56815Sec1/munc18-like (SM) proteinscoord: 9..557
NoneNo IPR availableGENE3D3.40.50.2060coord: 2..135
e-value: 1.4E-39
score: 134.3
NoneNo IPR availableGENE3D3.40.50.1910coord: 136..303
e-value: 1.4E-35
score: 122.9
coord: 304..557
e-value: 1.0E-37
score: 129.9

Blast
[Close]
BLAST of TCONS_00006139-protein vs. Swiss-Prot (Human)
Match: VPS45 (Vacuolar protein sorting-associated protein 45 OS=Homo sapiens GN=VPS45 PE=1 SV=1)

HSP 1 Score: 763.066 bits (1969), Expect = 0.000e+0
Identity = 368/571 (64.45%), Postives = 459/571 (80.39%), Query Frame = 0 
Query:    9 MNVIVAVKQYITKMIDDAGPGMKVLLMDKETTGIVSMVYAQSEILQKEVFLFERVDTQARETMKHLKAICFVRPTKENIEALKKELKIPKYGSYYIYFSNAILKNYVKQLAESDDQEVVKEVHEFYADFFAISPHVFSLNIVGCAKGKNWFGDRQDRVTDGLIAVLLSLRKKPIIRYQTASSMCKRLAESVMLKMGQESGLFEFRQSDISPLLLIVDRSDDPVTPLLNQWTYQAMVHELLSIKNNRIDLSKVPGISRELKEVVLSAEHDDVYLDNMYKNFGEIGINIKQLMNEF-QKNAKSNQKLDSVADMKAFVENYPQFRKMSGTVSKHVTVVSELSRLVGEHCLLELSELEQDMSAKSDHSMHLQAIKKLLANPKVRDIDAVRLVLLYILRYEKTQGNDAGGLRNDLKKRGVSDTMCKIVYNMVEYAGATVRTSDIFGQNKNALSMTKKFMKGLKGVENIYTQHKPLLHETLDNLIKGKLPDRLFPYLGKDTFRDRPQDVVVFMVGGATYEEALTVYELNRANPGVRIILGGTSIHNTESFLEEIKESTMITDTMTSSTSVAYSKSSR 578
            MNV+ AVKQYI+KMI+D+GPGMKVLLMDKETTGIVSMVY QSEILQKEV+LFER+D+Q RE MKHLKAICF+RPTKEN++ + +EL+ PKY  Y+IYFSN I K+ VK LAE+D+QEVV EV EFY D+ A++PH+FSLNI+GC +G+NW   +  R T GL A+LLSL+K P+IRYQ +S   KRLAE V   + +E  LFEFR++++ PLLLI+DR DD +TPLLNQWTYQAMVHELL I NNRIDLS+VPGIS++L+EVVLSAE+D+ Y +NMY NF EIG NIK LM +F +K  K  QKL+S+ADMKAFVENYPQF+KMSGTVSKHVTVV ELSRLV E  LLE+SE+EQ+++ ++DHS  LQ IK+LL NPKV + DA RLV+LY L YE+   N   GL  DL+ +GVS+   K+V  +VEY G  VR SD+F   K+A+++TK+F+KGLKGVEN+YTQH+P LHETLD+LIKG+L + L+PYLG  T RDRPQD++VF++GGATYEEALTVY LNR  PGVRI+LGGT++HNT+SFLEE+  S + + +  SS   + S S R
Sbjct:    1 MNVVFAVKQYISKMIEDSGPGMKVLLMDKETTGIVSMVYTQSEILQKEVYLFERIDSQNREIMKHLKAICFLRPTKENVDYIIQELRRPKYTIYFIYFSNVISKSDVKSLAEADEQEVVAEVQEFYGDYIAVNPHLFSLNILGCCQGRNWDPAQLSRTTQGLTALLLSLKKCPMIRYQLSSEAAKRLAECVKQVITKEYELFEFRRTEVPPLLLILDRCDDAITPLLNQWTYQAMVHELLGINNNRIDLSRVPGISKDLREVVLSAENDEFYANNMYLNFAEIGSNIKNLMEDFQKKKPKEQQKLESIADMKAFVENYPQFKKMSGTVSKHVTVVGELSRLVSERNLLEVSEVEQELACQNDHSSALQNIKRLLQNPKVTEFDAARLVMLYALHYERHSSNSLPGLMMDLRNKGVSEKYRKLVSAVVEYGGKRVRGSDLFSP-KDAVAITKQFLKGLKGVENVYTQHQPFLHETLDHLIKGRLKENLYPYLGPSTLRDRPQDIIVFVIGGATYEEALTVYNLNRTTPGVRIVLGGTTVHNTKSFLEEVLASGLHSRSKESSQVTSRSASRR 570
The following BLAST results are available for this feature:
BLAST of TCONS_00006139-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
VPS450.000e+064.45Vacuolar protein sorting-associated protein 45 OS=... [more]
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