TCONS_00006182-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00006182-protein
Unique NameTCONS_00006182-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length190

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00006182-protein ID=TCONS_00006182-protein|Name=TCONS_00006182-protein|organism=Clytia hemisphaerica|type=polypeptide|length=190bp
STYDERPFAMFHRTTRPEIKERIIKAFQDPDGMVRILIATIAFGMGIDCK
NLHRIIHFGVPSDLDSYFQESGRAGRDGAQCSALLLLYPRCITRYVKKDI
RDYVTNTQRCRREIFLEVYDSKPSTIQPKHTCCDFCHQKCECGNCESPDF
LVDLLQSRDEIELPDNELINDEVEEQVECREGESESEPEI
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_003528XLOC_003528Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00006182TCONS_00006182Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001650Helicase_C
IPR027417P-loop_NTPase
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 2..78
e-value: 1.4E-10
score: 51.1
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 7..77
e-value: 1.7E-13
score: 50.8
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 1..134
score: 12.645
NoneNo IPR availableGENE3D3.40.50.300coord: 3..140
e-value: 1.5E-23
score: 82.8
NoneNo IPR availableCDDcd00079HELICccoord: 4..86
e-value: 2.68098E-16
score: 70.7296
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 7..122

Blast
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BLAST of TCONS_00006182-protein vs. Swiss-Prot (Human)
Match: WRN (Werner syndrome ATP-dependent helicase OS=Homo sapiens GN=WRN PE=1 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 6.169e-19
Identity = 53/158 (33.54%), Postives = 82/158 (51.90%), Query Frame = 0 
Query:   14 TTRPEIKERIIKAFQDPDGMVRILIATIAFGMGIDCKNLHRIIHFGVPSDLDSYFQESGRAGRDGAQCSALLLLYPRCI--TRYVKKDIRD---------------YVTNTQRCRREIFLEVYDSKPST-----IQPKHTCCDFCHQKCECGNCESPD 149
            +TR +I  R ++        ++ +IATIAFGMGI+  ++ ++IH+G P D++SY+QE GRAGRDG Q S  +L  P  I   R++  +IR+                  ++ RCRR+I L  ++ K        I     CCD C  + +  +C S D
Sbjct:  801 STRKDIHHRFVR------DEIQCVIATIAFGMGINKADIRQVIHYGAPKDMESYYQEIGRAGRDGLQSSCHVLWAPADINLNRHLLTEIRNEKFRLYKLKMMAKMEKYLHSSRCRRQIILSHFEDKQVQKASLGIMGTEKCCDNCRSRLD--HCYSMD 950
The following BLAST results are available for this feature:
BLAST of TCONS_00006182-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
WRN6.169e-1933.54Werner syndrome ATP-dependent helicase OS=Homo sap... [more]
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