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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00006920-protein ID=TCONS_00006920-protein|Name=TCONS_00006920-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1267bp
SPPPPSQAECCPPSPLPPLPCCTTPTPPVCCPPPPLPPLPCCPTTTTLPP
PPVTTPRPVTTPETTRPVTTQPPTTKRIKTTKPLPTSTPFTTKKKTTTPK
PIRTRTTRKPSTPKIPETPPPATYPTPKTPCPPGNITCSGMQIDLFDVFD
FQCPGCPTCTPPCPPEQVPTTPQSIVDAASKLVMQGLNQLVDSASKTVGT
FMEGNHQQQGQQPSSYSSPATTQQQVNYGSLEAAQQPQTGYGQSGSLIYP
LSYQEEQQMRQKAAASPSSRYAPVYSLVTGGNTPGSVRNNLNNGVDSKTM
DDEYTSSIKDISTKSGESYSNQNQNLDQLSPIKLWTTSRPPGSSQTTTDT
QNIGTITQQPIIIDHNKPMETLTGNHGITWLLTDIQNGVVTSADDLKVHG
DIQKWQGGLKLDGKDSLIEVNTSKVPFLEDFSQAKDGFSLHFKLMLDNDI
DDYQQPRYLFDVITGKQDTMYCYILKGHVCCGVTYSGKDYKVNSTIFIDE
WAYLSIGWESTKGLYLYVNGELRSKSTHPTDMTPDKRNELSNDVSLLSPN
GFVIGCTMNQSDCLIVYIMMVEIVVGMEDTRALIEFAPPILTNKYLVTAS
SAYEASAFQRQLRKTDAVEESRGTLVFDGVRGFMTDLGTYADTFVTSPNL
NPAGLTVMIKLKYDHNTRNSSDEKFILDTGGWLGHGISLFTHNGLIYATV
GSNGHVWVTNTSSIDFTSWNLLIITWRQDMGIHLYFNGAIASKEKFPRYT
LDDYKDSSSRLTIGCNLFKAPQSFGKFFLSMLSFSPMFSSIDELMKFSLP
LKLLPTFDWFLMMIHNGTTMTTPPLFSHGNVRQTDNGLLLDGKSGWLSAE
GLQGVSDNNGEIICEHFQKNITCPAGQIIKLGYANYGRTSDIPCQSIRKY
ITRTCKSTDSLKIAKKECEGKNHCIAKALNSVFGNPCPGVIKYLELRYQC
VPEKTNGTNKNELANVAEPIRDHFLLNPALSEDGITITMKLKILNDLDQS
YSGPCFIFDSGGHYDGEGVSMYVLKDELHCVVAVKNGMWATKARITRNEW
ILVILTWQRNQGIILYINGLVSGSSINKIHSSAETNNTSNQFVFGRSVST
SKDGEGFSRFQTTVFSLLKHFVTKSESIRLFSYYVGRAIAKGMEVSAMTS
DTTIICEYESRTIRCPSDQVLEIVNCNYGRTSARPCAWGTHHVTNCTLPS
SVDIARAHCNGKNSCELTAKSGMWKANPCVGVIKYVEVKYICNEVKLGES
RSTTYIGNEDPNSLVIP Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0030246 | carbohydrate binding |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0030246 |
carbohydrate binding |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | PRINTS | PR01217 | PRICHEXTENSN | coord: 1..17
score: 30.59
coord: 105..130
score: 25.38
coord: 38..59
score: 33.64
coord: 84..101
score: 36.67
coord: 60..76
score: 35.29
coord: 25..37
score: 52.31 |
| None | No IPR available | GENE3D | 2.60.120.200 | | coord: 279..573
e-value: 2.5E-9
score: 37.0 |
| None | No IPR available | GENE3D | 2.60.120.200 | | coord: 814..1137
e-value: 1.5E-9
score: 37.6
coord: 598..793
e-value: 1.2E-8
score: 34.7 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 204..224 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 276..303 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 42..128 |
| IPR000922 | D-galactoside/L-rhamnose binding SUEL lectin domain | PFAM | PF02140 | Gal_Lectin | coord: 1163..1242
e-value: 8.8E-17
score: 61.2
coord: 871..950
e-value: 2.2E-19
score: 69.5 |
| IPR000922 | D-galactoside/L-rhamnose binding SUEL lectin domain | PROSITE | PS50228 | SUEL_LECTIN | coord: 863..951
score: 13.867 |
| IPR000922 | D-galactoside/L-rhamnose binding SUEL lectin domain | PROSITE | PS50228 | SUEL_LECTIN | coord: 1155..1243
score: 11.463 |
| IPR013320 | Concanavalin A-like lectin/glucanase domain | SUPERFAMILY | 49899 | Concanavalin A-like lectins/glucanases | coord: 977..1101 |
| IPR013320 | Concanavalin A-like lectin/glucanase domain | SUPERFAMILY | 49899 | Concanavalin A-like lectins/glucanases | coord: 395..563 |
| IPR013320 | Concanavalin A-like lectin/glucanase domain | SUPERFAMILY | 49899 | Concanavalin A-like lectins/glucanases | coord: 626..770 |
Blast
The following BLAST results are available for this feature:
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