TCONS_00006932-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00006932-protein
Unique NameTCONS_00006932-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length300

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00006932-protein ID=TCONS_00006932-protein|Name=TCONS_00006932-protein|organism=Clytia hemisphaerica|type=polypeptide|length=300bp
MKVLIGGGTGFVGRHLEKALRQRGHTVQLISRSKGADRVSWSELKEEQKL
PECDALVNLSGEYILNPFRLWNASYKKDIYDSRIGTNQLLTDLVTKATTR
PSVWVSAHAEGIYPRSHHKTYDDHYQPESKEGNYGQQLCYDWEKSAMLPS
DVTDVRHVGIRIGLVLGRDGGFIQQSYLPFWLGLGGTVGSGDQKFPWIHI
KDTANIFVHAIENDNMTGFYNAISPGQCNSSDFSRAFGAALNRPSFMWVP
SFVIQLMTGRDRAPFILEGSRIKPTRTLESGFQFEFEDIEQAMVDIVNTK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_003878XLOC_003878Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00006932TCONS_00006932Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001509Epimerase_deHydtase
IPR010099SDR39U1
IPR013549DUF1731
IPR016040NAD(P)-bd_dom
Vocabulary: Molecular Function
TermDefinition
GO:0050662coenzyme binding
GO:0003824catalytic activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003824 catalytic activity
molecular_function GO:0050662 coenzyme binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001509NAD-dependent epimerase/dehydratasePFAMPF01370Epimerasecoord: 3..214
e-value: 5.2E-12
score: 45.7
IPR010099Epimerase family protein SDR39U1TIGRFAMTIGR01777TIGR01777coord: 3..293
e-value: 3.3E-83
score: 277.6
NoneNo IPR availableGENE3D3.40.50.720coord: 1..300
e-value: 4.3E-28
score: 98.0
IPR013549Domain of unknown function DUF1731PFAMPF08338DUF1731coord: 249..296
e-value: 4.7E-13
score: 48.6
IPR016040NAD(P)-binding domainSUPERFAMILY51735NAD(P)-binding Rossmann-fold domainscoord: 1..298

Blast
[Close]
BLAST of TCONS_00006932-protein vs. Swiss-Prot (Human)
Match: D39U1 (Epimerase family protein SDR39U1 OS=Homo sapiens GN=SDR39U1 PE=1 SV=2)

HSP 1 Score: 232.261 bits (591), Expect = 5.609e-75
Identity = 119/275 (43.27%), Postives = 165/275 (60.00%), Query Frame = 0 
Query:   25 HTVQLISRSKGADRVSWSELKEEQKLPECDALVNLSGEYILNPFRLWNASYKKDIYDSRIGTNQLLTDLVTKATTRPSVWVSAHAEGIYPRSHHKTYDDHYQPESKEGNYG--QQLCYDWEKSAMLPSDVTDVRHVGIRIGLVLGRDGGFIQQSYLPFWLGLGGTVGSGDQKFPWIHIKDTANIFVHAIENDNMTGFYNAISPGQCNSSDFSRAFGAALNRPSFMWVPSFVIQLMTGRDRAPFILEGSRIKPTRTLESGFQFEFEDIEQAMVDIV 297
            H V L+SR  G  R++W EL     LP CDA VNL+GE ILNP R WN +++K++  SR+ T QLL   +TKA   P  WV       Y  S    YD+    +S  G++     L   WE +A LP D T  R V +R G+VLGR GG +    LPF LGLGG +GSG Q FPWIHI D A I  HA+E +++ G  N ++P    +++F++  GAAL R +F+ +PS V+Q + GR RA  +LEG ++ P RTL +G+Q+ F ++  A+ +IV
Sbjct:   51 HEVTLVSRKPGPGRITWDELAAS-GLPSCDAAVNLAGENILNPLRRWNETFQKEVIGSRLETTQLLAKAITKAPQPPKAWVLVTGVAYYQPSLTAEYDE----DSPGGDFDFFSNLVTKWEAAARLPGDST--RQVVVRSGVVLGRGGGAMGHMLLPFRLGLGGPIGSGHQFFPWIHIGDLAGILTHALEANHVHGVLNGVAPSSATNAEFAQTLGAALGRRAFIPLPSAVVQAVFGRQRAIMLLEGQKVIPQRTLATGYQYSFPELGAALKEIV 318
The following BLAST results are available for this feature:
BLAST of TCONS_00006932-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
D39U15.609e-7543.27Epimerase family protein SDR39U1 OS=Homo sapiens G... [more]
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