TCONS_00007321-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00007321-protein
Unique NameTCONS_00007321-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length374

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00007321-protein ID=TCONS_00007321-protein|Name=TCONS_00007321-protein|organism=Clytia hemisphaerica|type=polypeptide|length=374bp
FCMLYTLCSRDQVTMENFLYNFQPSKDTEESSRDGWGGRGGYMQARKSKH
QDQFQTSFSRKSNIFNEVSIWVNGYTEPSSDELRKIMGEHGGKYQHSFSK
TYVTRVIATNLPDSKIKNLKRNDKVVRPNWIVDSLKAGRLLSIDKYLLYS
VNKRDGNVLSFQSLKTKQPSLDSGFGSESLSAPSKHANDITTDNAEIIDQ
DSNKTCHQQPILSKHDYSTKPKSTIKSPLKAEAEQDNFISEYYTHSRLHH
LSMWKAELKKFTDSIQKKRVSSTKTVSSHFSRQTLIMHVDLDSFFVSVSL
KLNSELRGKPLAVCHSTSQGPNTGSSSSFSEIASCSYEARQYGCRNGMML
KHAKSLCPNLICVPYQFEEYRNVS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_004106XLOC_004106Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00007321TCONS_00007321Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001357BRCT_dom
IPR001126UmuC
Vocabulary: Biological Process
TermDefinition
GO:0006281DNA repair
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006281 DNA repair
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001357BRCT domainSMARTSM00292BRCT_7coord: 62..138
e-value: 2.4E-9
score: 47.1
IPR001357BRCT domainPFAMPF16589BRCT_2coord: 61..147
e-value: 8.7E-12
score: 45.2
IPR001357BRCT domainGENE3D3.40.50.10190coord: 47..153
e-value: 3.6E-19
score: 68.3
IPR001357BRCT domainPROSITEPS50172BRCTcoord: 60..148
score: 19.905
IPR001357BRCT domainCDDcd00027BRCTcoord: 72..136
e-value: 1.70776E-5
score: 41.1531
IPR001357BRCT domainSUPERFAMILY52113BRCT domaincoord: 62..148
IPR001126UmuC domainPFAMPF00817IMScoord: 289..374
e-value: 3.8E-21
score: 75.6
IPR001126UmuC domainPROSITEPS50173UMUCcoord: 286..374
score: 26.86
NoneNo IPR availableGENE3D3.30.70.270coord: 332..374
e-value: 2.4E-10
score: 40.1
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 274..374

Blast
[Close]
BLAST of TCONS_00007321-protein vs. Swiss-Prot (Human)
Match: REV1 (DNA repair protein REV1 OS=Homo sapiens GN=REV1 PE=1 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 3.988e-33
Identity = 66/139 (47.48%), Postives = 94/139 (67.63%), Query Frame = 0 
Query:   31 SSRDGWGGRGGYMQARKSKHQDQFQTSFSRK-----SNIFNEVSIWVNGYTEPSSDELRKIMGEHGGKYQHSFSKTYVTRVIATNLPDSKIKNLKRNDKVVRPNWIVDSLKAGRLLSIDKYLLYSVNKRDGNVLSFQSL 164
            +  DGW   GGYM A+  K ++QF++  + +     S IF+ V+I+VNGYT+PS++ELRK+M  HGG+Y   +S++  T +IATNLP++KIK LK  +KV+RP WIV+S+KAGRLLS   Y LY+        LSF  +
Sbjct:   10 AENDGWETWGGYMAAKVQKLEEQFRSDAAMQKDGTSSTIFSGVAIYVNGYTDPSAEELRKLMMLHGGQYHVYYSRSKTTHIIATNLPNAKIKELK-GEKVIRPEWIVESIKAGRLLSYIPYQLYTKQSSVQKGLSFNPV 147

HSP 2 Score: 124.79 bits (312), Expect = 4.574e-31
Identity = 72/204 (35.29%), Postives = 99/204 (48.53%), Query Frame = 0 
Query:  237 NFISEYYTHSRLHHLSMWKAELKKFTDSIQKK---------RVSSTKTVSSHF--------------SRQTLIMHVDLDSFFVSVSLKLNSELRGKPLAVCHSTSQG-------------------------------------PNTGSSS------SFSEIASCSYEARQYGCRNGMMLKHAKSLCPNLICVPYQFEEYRNVS 374
            NFIS +Y+HSRLHH+SMWK EL +F +++Q++         ++   KT  S                  Q+ IMHVD+D FFVSV ++   +L+GKP+AV  +   G                                     P++  ++      S +EIASCSYEARQ G +NGM   HAK LCPNL  VPY F  Y+ V+
Sbjct:  347 NFISNFYSHSRLHHISMWKCELTEFVNTLQRQSNGIFPGREKLKKMKTGRSALVVTDTGDMSVLNSPRHQSCIMHVDMDCFFVSVGIRNRPDLKGKPVAVTSNRGTGRAPLRPGANPQLEWQYYQNKILKGKAADIPDSSLWENPDSAQANGIDSVLSRAEIASCSYEARQLGIKNGMFFGHAKQLCPNLQAVPYDFHAYKEVA 550
The following BLAST results are available for this feature:
BLAST of TCONS_00007321-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
REV13.988e-3347.48DNA repair protein REV1 OS=Homo sapiens GN=REV1 PE... [more]
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