TCONS_00007412-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00007412-protein
Unique Name	TCONS_00007412-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	506

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00007412-protein ID=TCONS_00007412-protein|Name=TCONS_00007412-protein|organism=Clytia hemisphaerica|type=polypeptide|length=506bp
MEKVSRCFAQKSRHLLLSTGGKVSRINTRALTSLCPEDGHFAEPKMVTSF
PGPKVLEHKGRLAKHQRVDQLVMFCDFENSKGNFLQDIDGNVFLDIFQQI
ASIPLGYNHQALLDCVKTEEFQKILINRPAQGLSPGKEMMDRMENTLMKV
APRGLKHVQQMMCGACANENAMKAVFSRYNAMRRGSIDPTPLELETCMDG
RAPGAPDDLCIVAFDKAFHGRSLATFAISRSKAMHKFDYPSWHWPTATFP
NLKYPLEDNVQENREEEQRCLESLDNLIRDSNASGKYVAGLIVEPIQSEG
GDRHASNEFFQGVQAILHKYNASLIVDEVQTGGGASGEWWLHEQWNLPVP
PDVVTFSKKFLFGGFFFREELFPQHPMRIQNTWLGDPARLAMLDAVVQTV
EKDDLMTRTKEAGVELMKGINQLQNDFPEYVSKGRGNGTICAFDMPSTEK
RDQFLGLCRNEGLGVIGSGDIAVRFRPALIFSEAHAKMTYELMDTAFTKL
RAQDAN

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_004170	XLOC_004170	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00007412	TCONS_00007412	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR005814	Aminotrans_3
IPR015422	PyrdxlP-dep_Trfase_sub2
IPR015421	PyrdxlP-dep_Trfase_major_sub1
IPR015424	PyrdxlP-dep_Trfase

Vocabulary: **Molecular Function**
Term	Definition
GO:0008483	transaminase activity
GO:0030170	pyridoxal phosphate binding
GO:0003824	catalytic activity

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0030170	pyridoxal phosphate binding
molecular_function	GO:0008483	transaminase activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005814	Aminotransferase class-III	PIRSF	PIRSF000521	Transaminase_4ab_Lys_Orn	coord: 19..500 e-value: 1.9E-168 score: 558.7
IPR005814	Aminotransferase class-III	PFAM	PF00202	Aminotran_3	coord: 69..495 e-value: 5.0E-94 score: 315.1
IPR015422	Pyridoxal phosphate-dependent transferase, subdomain 2	GENE3D	3.90.1150.10		coord: 394..504 e-value: 1.0E-10 score: 41.2
IPR015421	Pyridoxal phosphate-dependent transferase, major region, subdomain 1	GENE3D	3.40.640.10		coord: 99..393 e-value: 8.7E-53 score: 179.0
IPR015424	Pyridoxal phosphate-dependent transferase	SUPERFAMILY	53383	PLP-dependent transferases	coord: 44..499

Blast

[Close]

BLAST of TCONS_00007412-protein vs. Swiss-Prot (Human)
Match: GABT (4-aminobutyrate aminotransferase, mitochondrial OS=Homo sapiens GN=ABAT PE=1 SV=3)

HSP 1 Score: 443.351 bits (1139), Expect = 3.949e-152
Identity = 208/482 (43.15%), Postives = 309/482 (64.11%), Query Frame = 0

Query:    7 CFAQKSRHLLLSTGGKVSRINTRALTSLCPEDGHFAEPKMVTSFPGPKVLEHKGRLAKHQRVDQLVMFCDFENSKGNFLQDIDGNVFLDIFQQIASIPLGYNHQALLDCVKTEEFQKILINRPAQGLSPGKEMMDRMENTLMKVAPRGLKHVQQMMCGACANENAMKAVFSRYNAMRRGSIDPTPLELETCMDGRAPGAPDDLCIVAFDKAFHGRSLATFAISRSKAMHKFDYPSWHWPTATFPNLKYPLEDNVQENREEEQRCLESLDNLIRDSNASGKYVAGLIVEPIQSEGGDRHASNEFFQGVQAILHKYNASLIVDEVQTGGGASGEWWLHEQWNLPVPPDVVTFSKKFLFGGFFFREELFPQHPMRIQNTWLGDPARLAMLDAVVQTVEKDDLMTRTKEAGVELMKGINQLQNDFPEYVSKGRGNGTICAFDMPSTEKRDQFLGLCRNEGLGVIGSGDIAVRFRPALIFSEAHAKM 488
            C  Q S  LL+     +S+   +           +  P M T  PGP+  E   +L   Q  + +  FC++E S+GN+L D+DGN  LD++ QI+S+P+GY+H ALL  ++  +   + +NRPA G+ P +  ++++  +L+ VAP+G+  +  M CG+C+NENA+K +F  Y +  RG    +  ELETCM  +APG PD   I++F  AFHGR++   A + SKA+HK D PS+ WP A FP LKYPLE+ V+EN++EE RCLE +++LI       K VAG+IVEPIQSEGGD HAS++FF+ ++ I  K+  + +VDEVQTGGG +G++W HE W L  P DV+TFSKK + GGFF +EE  P  P RI NTWLGDP++  +L  V+  ++++DL+     AG  L+ G+  LQ  +P+++S+ RG GT C+FD P    R++ + + RN+G+ + G GD ++RFRP L+F + HA +
Sbjct:   12 CSFQHSYRLLVPGSRHISQAAAKVDVEF-----DYDGPLMKTEVPGPRSQELMKQLNIIQNAEAVHFFCNYEESRGNYLVDVDGNRMLDLYSQISSVPIGYSHPALLKLIQQPQNASMFVNRPALGILPPENFVEKLRQSLLSVAPKGMSQLITMACGSCSNENALKTIFMWYRSKERGQRGFSQEELETCMINQAPGCPD-YSILSFMGAFHGRTMGCLATTHSKAIHKIDIPSFDWPIAPFPRLKYPLEEFVKENQQEEARCLEEVEDLIVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFFRKLRDIARKHGCAFLVDEVQTGGGCTGKFWAHEHWGLDDPADVMTFSKKMMTGGFFHKEEFRPNAPYRIFNTWLGDPSKNLLLAEVINIIKREDLLNNAAHAGKALLTGLLDLQARYPQFISRVRGRGTFCSFDTPDDSIRNKLILIARNKGVVLGGCGDKSIRFRPTLVFRDHHAHL 487

The following BLAST results are available for this feature:

BLAST of TCONS_00007412-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00007412-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
GABT	3.949e-152	43.15	4-aminobutyrate aminotransferase, mitochondrial OS...	[more]

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TCONS_00007412-protein (polypeptide) - C. hemisphaerica