TCONS_00007423-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00007423-protein
Unique NameTCONS_00007423-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length112

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00007423-protein ID=TCONS_00007423-protein|Name=TCONS_00007423-protein|organism=Clytia hemisphaerica|type=polypeptide|length=112bp
MNRLINPLSRLLRTCNTPIQNVAPLARYLSSNEGKSEGELHIENVLKSKM
NVADIQVNDISGGCGSMYEVYVCSNDFKGKRMVQQHRLVTEILKSEVAEM
HGLRIMTSVPES
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_004181XLOC_004181Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00007423TCONS_00007423Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002634BolA
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.300.90coord: 34..112
e-value: 1.3E-22
score: 79.2
IPR002634BolA proteinPFAMPF01722BolAcoord: 54..111
e-value: 7.3E-12
score: 45.3
IPR002634BolA proteinSUPERFAMILY82657BolA-likecoord: 36..111

Blast
[Close]
BLAST of TCONS_00007423-protein vs. Swiss-Prot (Human)
Match: BOLA3 (BolA-like protein 3 OS=Homo sapiens GN=BOLA3 PE=1 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 1.391e-26
Identity = 44/78 (56.41%), Postives = 58/78 (74.36%), Query Frame = 0 
Query:   35 KSEGELHIENVLKSKMNVAD-IQVNDISGGCGSMYEVYVCSNDFKGKRMVQQHRLVTEILKSEVAEMHGLRIMTSVPE 111
            ++EGEL +  +LK K   A  I+V DISGGCG+MYE+ + S +FK KR VQQH++V + LK E+ EMHGLRI TSVP+
Sbjct:   29 QTEGELRVTQILKEKFPRATAIKVTDISGGCGAMYEIKIESEEFKEKRTVQQHQMVNQALKEEIKEMHGLRIFTSVPK 106
The following BLAST results are available for this feature:
BLAST of TCONS_00007423-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
BOLA31.391e-2656.41BolA-like protein 3 OS=Homo sapiens GN=BOLA3 PE=1 ... [more]
back to top