TCONS_00007457-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00007457-protein
Unique NameTCONS_00007457-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length222

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00007457-protein ID=TCONS_00007457-protein|Name=TCONS_00007457-protein|organism=Clytia hemisphaerica|type=polypeptide|length=222bp
MRMLSAVSAWYPAGLEALYTKVKNFATMVLKIIVASIAVLLVIPLFLGIL
FEFVVVIPLRVPLDQTALLYIWQDWALGVLHLKILCALIMVGPDWWLRDA
IDRAYRNGFANLDLMFILQKIVYPVTVSLLLAITAPYVAVAGVMPLLGFE
KSTIVLCLHRVYPLLMLSISVIGVLLFQGKQFKALYEKIRNEKYLIGKVL
VNYEPRKTKSITSSSAAATETQ
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_004207XLOC_004207Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00007457TCONS_00007457Clytia hemisphaericatranscript
Blast
[Close]
BLAST of TCONS_00007457-protein vs. Swiss-Prot (Human)
Match: MARH6 (E3 ubiquitin-protein ligase MARCH6 OS=Homo sapiens GN=MARCH6 PE=1 SV=2)

HSP 1 Score: 196.052 bits (497), Expect = 6.195e-58
Identity = 98/210 (46.67%), Postives = 145/210 (69.05%), Query Frame = 0 
Query:    1 MRMLSAVSAWYPAGLEALYTKVKNFATMVLKIIVASIAVLLVIPLFLGILFEFVVVIPLRVPLDQTALLYIWQDWALGVLHLKILCALIMVGPDWWLRDAIDRAYRNGFANLDLMFILQKIVYPVTVSLLLAITAPYVAVAGVMPLLGFEKSTIVLCLHRVYPLLMLSISVIGVLLFQGKQFKALYEKIRNEKYLIGKVLVNYEPRKTKS 210
            +R ++ + AW P G   ++ KVK ++ M++K ++ ++ +  V+PL LG+LFE V+V PLRVPLDQT L Y WQDWALGVLH KI+ A+ ++GP WWL+  I++ Y NG  N+DL +I++K+  PV   LLL++  PYV  +GV+PLLG       L   R+YP L++ + ++ +L FQ +QFK LYE I+N+KYL+G+ LVNYE +  K 
Sbjct:  689 IRAVTVMVAWMPQGRRVIFQKVKEWSLMIMKTLIVAVLLAGVVPLLLGLLFELVIVAPLRVPLDQTPLFYPWQDWALGVLHAKIIAAITLMGPQWWLKTVIEQVYANGIRNIDLHYIVRKLAAPVISVLLLSLCVPYVIASGVVPLLGVTAEMQNLVHRRIYPFLLMVVVLMAILSFQVRQFKRLYEHIKNDKYLVGQRLVNYERKSGKQ 898
The following BLAST results are available for this feature:
BLAST of TCONS_00007457-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MARH66.195e-5846.67E3 ubiquitin-protein ligase MARCH6 OS=Homo sapiens... [more]
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