TCONS_00007630-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00007630-protein
Unique NameTCONS_00007630-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length835

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00007630-protein ID=TCONS_00007630-protein|Name=TCONS_00007630-protein|organism=Clytia hemisphaerica|type=polypeptide|length=835bp
MSQPTSNTGRNQSQRGGHGGRRGWRGRFRGRGAYNQQSRQSTVNTQRAPI
VQRDHINCPFKKWSTYLVDEVYTPNSEFVNTITALYRYFKNNLHQFNKEE
VEEQKEVLLDLHALKTNTDLQEHLPTLCEDIRNNPSRMIPALAMVIHESF
LDDQFEESPQSITVFFDVPYLNVRLLNYEPITPLKSLKSSYFGKLVSIKG
TVVRVGNIKPILTKMAFQCNSCGIQQVLSITEGKYETPTSCLGDDCRARS
FTPLRSSPKTETVNWQLIKLQEIMLDDQREAGRIPRNIECELTHGLVDNC
TPGDMVTITGIVKVSKNEENKFRGGGKGNSMYLLFIQAISISNDKEIKES
GNAEENNDFSIKDLYAIQEIQSEKELFRLVVGSLCPAIYGHELVKAGMVL
ALFGGTKKFTDEKNAIPVRSDPHVLVVGDPGLGKSQLLQAVSNVAPRGVY
VCGNTTTTSGLTVTLTKESGSSDYALEAGALVLADKGCCCIDEFDKMTDQ
HQALLEAMEQQSISLAKAGIVCSLPARTSIIAAANPVGGHYNKAKTVSEN
LKMNSALLSRFDLVFILLDKPDEEMDCILSEHVMALHSDDPKDLSFRAIP
ATPSVRTTTQNLNQSVTVQRDGPDKKPGLLQLWESENSLKKMLKIKRGEN
FDPVPPQLLRKYIQYARKYVNPKLSTDASKILQEFYLNLRKQQQGPDSTP
ITTRQLEAMIRLTEARARLELREKANVNDAREVVEIMKNSLVDTCSTENG
ELVFDRSINGSGMSKRNQCKYFVAELNKIAEREKSNLFTTEQMYRIAKQL
NINMKNFDDFISTLNTQNFLLKKGFRTYELQTAVW
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_004306XLOC_004306Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00007630TCONS_00007630Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001208MCM_dom
IPR031327MCM
IPR003593AAA+_ATPase
IPR033762MCM_OB
IPR012340NA-bd_OB-fold
IPR027417P-loop_NTPase
Vocabulary: Biological Process
TermDefinition
GO:0006270DNA replication initiation
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0005524ATP binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006270 DNA replication initiation
molecular_function GO:0005524 ATP binding
molecular_function GO:0003677 DNA binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 491..511
NoneNo IPR availableGENE3D3.30.1640.10coord: 69..170
e-value: 1.5E-4
score: 21.4
NoneNo IPR availableGENE3D3.40.50.300coord: 360..588
e-value: 3.4E-19
score: 68.3
NoneNo IPR availableGENE3D2.40.50.140coord: 181..345
e-value: 9.4E-45
score: 151.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..48
NoneNo IPR availableCDDcd00009AAAcoord: 413..567
e-value: 6.42552E-8
score: 50.6075
IPR001208MCM domainPRINTSPR01657MCMFAMILYcoord: 506..519
score: 75.27
coord: 557..565
score: 74.67
coord: 419..434
score: 52.76
coord: 479..493
score: 77.42
coord: 530..542
score: 61.29
IPR001208MCM domainPFAMPF00493MCMcoord: 365..741
e-value: 4.1E-123
score: 410.6
IPR001208MCM domainPROSITEPS50051MCM_2coord: 376..583
score: 72.698
IPR031327Mini-chromosome maintenance proteinSMARTSM00350mcmcoord: 180..742
e-value: 1.7E-140
score: 482.7
IPR003593AAA+ ATPase domainSMARTSM00382AAA_5coord: 420..572
e-value: 2.1E-7
score: 40.6
IPR033762MCM OB domainPFAMPF17207MCM_OBcoord: 184..315
e-value: 4.5E-27
score: 94.3
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 118..322
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 644..741
coord: 386..588

Blast
[Close]
BLAST of TCONS_00007630-protein vs. Swiss-Prot (Human)
Match: MCM8 (DNA helicase MCM8 OS=Homo sapiens GN=MCM8 PE=1 SV=2)

HSP 1 Score: 846.655 bits (2186), Expect = 0.000e+0
Identity = 438/788 (55.58%), Postives = 567/788 (71.95%), Query Frame = 0 
Query:   59 PFKKWSTYLVDEVYTPNSEFVNTITALYRYFKNNLHQFNKEEVEEQKEVLLDLHALKTNTDLQEHLPTLCEDIRNNPSRMIPALAMVIHESFLDD--------QFEES-PQSITVFFDVPYLNVRLLNYEPITPLKSLKSSYFGKLVSIKGTVVRVGNIKPILTKMAFQCNSCGIQQVLSITEGKYETPTSCLGDDCRARSFTPLRSSPKTETVNWQLIKLQEIMLDDQREAGRIPRNIECELTHGLVDNCTPGDMVTITGIVKVSKNEENKFRGGGKGNSMYLLFIQAISISNDK--EIKESGNAEENN---DFSIKDLYAIQEIQSEKELFRLVVGSLCPAIYGHELVKAGMVLALFGGTKKFTDEKNAIPVRSDPHVLVVGDPGLGKSQLLQAVSNVAPRGVYVCGNTTTTSGLTVTLTKESGSSDYALEAGALVLADKGCCCIDEFDKMTDQHQALLEAMEQQSISLAKAGIVCSLPARTSIIAAANPVGGHYNKAKTVSENLKMNSALLSRFDLVFILLDKPDEEMDCILSEHVMALHSDDPKDLSFRAIPATPSVRTTTQNLNQSVTVQRDGPDKKPGLLQLWESENSLKKMLKIKRGENFDPVPPQLLRKYIQYARKYVNPKLSTDASKILQEFYLNLRKQQQGPDSTPITTRQLEAMIRLTEARARLELREKANVNDAREVVEIMKNSLVDTCSTENGELVFDRSINGSGMSKRNQCKYFVAELNKIAEREKSNLFTTEQMYRIAKQLNINMKNFDDFISTLNTQNFLLKKGFRTYELQT 832
            P+K W  Y   EVY+ +S  +  I A  ++F  ++  ++K+E+E +  +L+D   L    ++   +P +  ++R+ P + +  + + IH+    D        Q +E          +VP+++ R+ NYEP+T LK+++++Y+GK ++++GTVVRV NIKP+ TKMAF C +CG  Q   + +GKY  PT C    CR RSFT LRSSP T T++WQ IK+QE+M DDQREAGRIPR IECEL H LVD+C PGD VTITGIVKVS  EE       K   M+LL+I+A SISN K  + K S +  ++    +FS+KDLYAIQEIQ+E+ LF+L+V SLCP I+GHELVKAG+ LALFGG++K+ D+KN IP+R DPH+LVVGDPGLGKSQ+LQA  NVAPRGVYVCGNTTTTSGLTVTL+K+S S D+ALEAGALVL D+G C IDEFDKM +QHQALLEAMEQQSISLAKAG+VCSLPARTSIIAAANPVGGHYNKAKTVSENLKM SALLSRFDLVFILLD P+E  D +LSEHV+A+ +        R I +    R  +Q+ N SV             L++  SE  L + LK+  GE  DP+P QLLRKYI YAR+YV P+LST+A+++LQ+FYL LRKQ Q  +S+PITTRQLE++IRLTEARARLELRE+A   DA ++VEIMK S++ T S E G L F+RS +GSGMS R+  K F++ LN +AER  +N+F   Q+ +IAK+LNI + +F++FI +LN Q +LLKKG + Y+LQT
Sbjct:   74 PYKGWKLYF-SEVYSDSSPLIEKIQAFEKFFTRHIDLYDKDEIERKGSILVDFKELTEGGEVTNLIPDIATELRDAPEKTLACMGLAIHQVLTKDLERHAAELQAQEGLSNDGETMVNVPHIHARVYNYEPLTQLKNVRANYYGKYIALRGTVVRVSNIKPLCTKMAFLCAACGEIQSFPLPDGKYSLPTKCPVPVCRGRSFTALRSSPLTVTMDWQSIKIQELMSDDQREAGRIPRTIECELVHDLVDSCVPGDTVTITGIVKVSNAEEGSRNKNDK--CMFLLYIEANSISNSKGQKTKSSEDGCKHGMLMEFSLKDLYAIQEIQAEENLFKLIVNSLCPVIFGHELVKAGLALALFGGSQKYADDKNRIPIRGDPHILVVGDPGLGKSQMLQAACNVAPRGVYVCGNTTTTSGLTVTLSKDSSSGDFALEAGALVLGDQGICGIDEFDKMGNQHQALLEAMEQQSISLAKAGVVCSLPARTSIIAAANPVGGHYNKAKTVSENLKMGSALLSRFDLVFILLDTPNEHHDHLLSEHVIAIRAGKQ-----RTISSATVARMNSQDSNTSV-------------LEVV-SEKPLSERLKVVPGETIDPIPHQLLRKYIGYARQYVYPRLSTEAARVLQDFYLELRKQSQRLNSSPITTRQLESLIRLTEARARLELREEATKEDAEDIVEIMKYSMLGTYSDEFGNLDFERSQHGSGMSNRSTAKRFISALNNVAERTYNNIFQFHQLRQIAKELNIQVADFENFIGSLNDQGYLLKKGPKVYQLQT 839
The following BLAST results are available for this feature:
BLAST of TCONS_00007630-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MCM80.000e+055.58DNA helicase MCM8 OS=Homo sapiens GN=MCM8 PE=1 SV=... [more]
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