TCONS_00007660-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00007660-protein
Unique NameTCONS_00007660-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length112

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00007660-protein ID=TCONS_00007660-protein|Name=TCONS_00007660-protein|organism=Clytia hemisphaerica|type=polypeptide|length=112bp
MAGYAKKATQLVGLAVAKAPRKTLTEIYSKTLGVLSTLPESSVYRQQVEH
ITNQRLELVKKTEDVMKLEKLINCGQIEEVMVQASDELQLVEQMAQWQVW
EAPESQAPAGQW
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_004333XLOC_004333Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00007660TCONS_00007660Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006806ETC_CI_29_9
Vocabulary: Biological Process
TermDefinition
GO:0022904respiratory electron transport chain
Vocabulary: Cellular Component
TermDefinition
GO:0005743mitochondrial inner membrane
Vocabulary: Molecular Function
TermDefinition
GO:0016651oxidoreductase activity, acting on NAD(P)H
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0022904 respiratory electron transport chain
cellular_component GO:0005743 mitochondrial inner membrane
molecular_function GO:0016651 oxidoreductase activity, acting on NAD(P)H
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006806ETC complex I subunitPFAMPF04716ETC_C1_NDUFA5coord: 13..79
e-value: 1.3E-27
score: 95.2

Blast
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BLAST of TCONS_00007660-protein vs. Swiss-Prot (Human)
Match: NDUA5 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5 OS=Homo sapiens GN=NDUFA5 PE=1 SV=3)

HSP 1 Score: 103.99 bits (258), Expect = 3.222e-30
Identity = 52/112 (46.43%), Postives = 72/112 (64.29%), Query Frame = 0 
Query:    1 MAGYAKKATQLVGLAVAKAPRKTLTEIYSKTLGVLSTLPESSVYRQQVEHITNQRLELVKKTEDVMKLEKLINCGQIEEVMVQASDELQLVEQMAQWQVWEAPESQAPAGQW 112
            MAG  KK T LVGLAV   P + L  +Y+K L VL  +P+++ YR+  E ITN++L +VK   DV KLE  +  GQ+EEV++QA  EL L  +M +W++WE    + PA QW
Sbjct:    1 MAGVLKKTTGLVGLAVCNTPHERLRILYTKILDVLEEIPKNAAYRKYTEQITNEKLAMVKAEPDVKKLEDQLQGGQLEEVILQAEHELNLARKMREWKLWEPLVEEPPADQW 112
The following BLAST results are available for this feature:
BLAST of TCONS_00007660-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
NDUA53.222e-3046.43NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
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