TCONS_00007697-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00007697-protein
Unique NameTCONS_00007697-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length343

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00007697-protein ID=TCONS_00007697-protein|Name=TCONS_00007697-protein|organism=Clytia hemisphaerica|type=polypeptide|length=343bp
TDTPIRKDVVIGRSFVLQCPKLSYNFPQNILWGTVPQNGKPILLADTKER
YRMSNGDLLFTHVTEQDLKDVNDLIGGISCINYHNGLYVQSVKFNLKRVT
AFDDNFAPSFLESISSTNDAYEGEKFKFKCSAGGRPTPKVTWFGPRGEID
NLNPDYQISLPENILTIPAAYPRLAGNYRCVVKNSQGTRQSEGKLVIKSF
PKWKKKLKDETVDENSQITLKVDAIGSGILAYDWFKNGQPIDRTNSTYKV
NGNSLTVKNIRKSDFGFIQAFVNNGQQEISSTAFLNVKGAEIPSARKLKK
EKKFYEFYILIGIASIILLALVVFVLYIHLKDRNTETEEQQTS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_004364XLOC_004364Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00007697TCONS_00007697Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003599Ig_sub
IPR003598Ig_sub2
IPR013783Ig-like_fold
IPR013098Ig_I-set
IPR007110Ig-like_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003599Immunoglobulin subtypeSMARTSM00409IG_3ccoord: 207..288
e-value: 0.044
score: 22.9
coord: 115..198
e-value: 2.8E-6
score: 36.8
IPR003598Immunoglobulin subtype 2SMARTSM00408igc2_5coord: 121..187
e-value: 1.5E-4
score: 31.1
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 2..101
e-value: 0.003
score: 17.0
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 206..299
e-value: 2.8E-13
score: 49.2
coord: 105..205
e-value: 2.8E-16
score: 58.8
IPR013098Immunoglobulin I-setPFAMPF07679I-setcoord: 201..287
e-value: 3.3E-8
score: 33.4
coord: 114..196
e-value: 2.4E-11
score: 43.4
IPR007110Immunoglobulin-like domainPROSITEPS50835IG_LIKEcoord: 108..196
score: 11.406
IPR007110Immunoglobulin-like domainPROSITEPS50835IG_LIKEcoord: 201..286
score: 7.522
IPR007110Immunoglobulin-like domainSUPERFAMILY48726Immunoglobulincoord: 106..203
IPR007110Immunoglobulin-like domainSUPERFAMILY48726Immunoglobulincoord: 200..288

Blast
[Close]
BLAST of TCONS_00007697-protein vs. Swiss-Prot (Human)
Match: CNTN5 (Contactin-5 OS=Homo sapiens GN=CNTN5 PE=1 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 6.849e-19
Identity = 53/171 (30.99%), Postives = 79/171 (46.20%), Query Frame = 0 
Query:  117 TNDAYEGEKFKFKCSAGGRPTPKVTWFGPRGEIDNLNPDYQISLPENILTIPAAYPRLAGNYRCVVKNSQGTRQSEGKLVIKSFPKWKKKLKDETVDENSQITLKVDAIGSGILAYDWFKNGQPIDRTNSTYKVNGNSLTVKNIRKSDFGFIQAFVNNGQQEISSTAFLNV 287
            T  A +G   K +C A G P P +TW    G I +     ++   + +L IP      AG Y C  +NS+G     G+L + ++P W +KL D  +D  S +  +  A G     Y W KNG P+   +    VNG  L + N+ +SD G  Q    N    I ++A L +
Sbjct:  309 TVTAAKGTTVKMECFALGNPVPTITWMKVNGYIPS---KARLRKSQAVLEIPNVQLDDAGIYECRAENSRGKNSFRGQLQVYTYPHWVEKLNDTQLDSGSPLRWECKATGKPRPTYRWLKNGVPLSPQSRVEMVNG-VLMIHNVNQSDAGMYQCLAENKYGAIYASAELKI 475
The following BLAST results are available for this feature:
BLAST of TCONS_00007697-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CNTN56.849e-1930.99Contactin-5 OS=Homo sapiens GN=CNTN5 PE=1 SV=2[more]
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