TCONS_00007734-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00007734-protein
Unique NameTCONS_00007734-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length128

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00007734-protein ID=TCONS_00007734-protein|Name=TCONS_00007734-protein|organism=Clytia hemisphaerica|type=polypeptide|length=128bp
FRIEIQLISTKKMLQKVKISSDALQVCMSHALSTEKEEIMGLLIGEVEDG
VSHVHATIMLYRLDKRKDRVEISPEQLSEASSKAEEMGKMTHNHRPMRII
GWYHSHPHITVWPSHVGMSNYTFFIRTF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_004385XLOC_004385Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00007734TCONS_00007734Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000555JAMM/MPN+_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000555JAB1/MPN/MOV34 metalloenzyme domainSMARTSM00232pad1_6coord: 16..127
e-value: 0.01
score: 17.5
IPR000555JAB1/MPN/MOV34 metalloenzyme domainPFAMPF01398JABcoord: 14..118
e-value: 2.8E-29
score: 101.4
NoneNo IPR availableGENE3D3.40.140.10coord: 14..124
e-value: 6.7E-26
score: 90.1
NoneNo IPR availableSUPERFAMILY102712JAB1/MPN domaincoord: 16..116

Blast
[Close]
BLAST of TCONS_00007734-protein vs. Swiss-Prot (Human)
Match: BRCC3 (Lys-63-specific deubiquitinase BRCC36 OS=Homo sapiens GN=BRCC3 PE=1 SV=2)

HSP 1 Score: 134.035 bits (336), Expect = 1.573e-39
Identity = 66/131 (50.38%), Postives = 84/131 (64.12%), Query Frame = 0 
Query:   19 ISSDALQVCMSHALSTEKEEIMGLLIGEVEDG-------------------------VSHVHATIMLYRLDKRKDRVEISPEQLSEASSKAEEMGKMTHNHRPMRIIGWYHSHPHITVWPSHVGMSNYTFF 124
            + SDA  VC++HALSTEKEE+MGL IGE+ D                          + H+H+ I+L R DKRKDRVEISPEQLS AS++AE + ++T   RPMR++GWYHSHPHITVWPSHV +     +
Sbjct:   14 LESDAFLVCLNHALSTEKEEVMGLCIGELNDDTRSDSKFAYTGTEMRTVAEKVDAVRIVHIHSVIILRRSDKRKDRVEISPEQLSAASTEAERLAELTG--RPMRVVGWYHSHPHITVWPSHVDVRTQAMY 142
The following BLAST results are available for this feature:
BLAST of TCONS_00007734-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
BRCC31.573e-3950.38Lys-63-specific deubiquitinase BRCC36 OS=Homo sapi... [more]
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