TCONS_00008330-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00008330-protein
Unique NameTCONS_00008330-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length865

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00008330-protein ID=TCONS_00008330-protein|Name=TCONS_00008330-protein|organism=Clytia hemisphaerica|type=polypeptide|length=865bp
MFIIGSAFIIVMMFTRKRHNLWVGCCFGYPGPVIPLNMLDSYENRKGFAI
SFGLVATLCLNVLLSNYDRIYGIEFGFMIMNWPAWTQIFVKILSAFFISI
VAYPFFVCQNMKNRLVGSILGIILTFIWICLEGYRAFQFMTTCFKIWAFV
GYGEVVGTLLSLVDYPTYISLLLLFVKFVWTFIKTLKQRKHRRALGESVH
WMFANDEDWKSEYMYLHVKNLLKKVPKQNHSIPEHLEKKKAQIDEEKGFR
NQIVKAQERFRNSLYQYKPEFKYSTRMMSSVLVTYIGMYQVTIFFAMYGY
VVFLLFDLLFDLDFIQKGAREIGLEISIIEKYISAIGLSWWLGLITALVF
SILVMSNSISWYRKHMLMLRKGDYSFLPRPLRKKKFNSASFMVASMKFAG
FQVAYACWGFLVLAFLLFFAYWILITQIIFAIRDGRLTMLLQLMLSIWPT
IVIAIGVFLIQYVMATKLFLFDKMTLQVDNRRVYHIISYSMFYFNIFLGL
VSCLLRIIFGMLFGIIFLQRLQKSTLPRAAELIDPGYSAYLGYILLEHQH
ANPVIQCFTRLLMESVRKEINNEQSSDPQNYFGTTKRGLMPAGFLDTTDM
SDIKREIRRKKRILIRWHLYITLSLNPTLLKFRFRNAVKRRKFNLDFFNR
LNPSLYWPEEEAKKEDEKEAGDQSVVVVEDENQMSGNFYVGDQKVDVRYR
RTGTVLEVIYSLKDAQQQKKRSFHHAVPEDLDHTSEKVLQYYGDNTNDVD
YSGDNTEENGNNIELVNYRRLSSRLHREEIKESKVDDLGDNGSENDGDNI
VVSETKILIDDDVIETFDVGDKKQEQIINNENSIKTEEWKNPSQKIEDAK
NVKHGITNETFSAKE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_004674XLOC_004674Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00008330TCONS_00008330Clytia hemisphaericatranscript
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF14752RBP_receptorcoord: 6..633
e-value: 3.5E-96
score: 323.1

Blast
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BLAST of TCONS_00008330-protein vs. Swiss-Prot (Human)
Match: STRA6 (Stimulated by retinoic acid gene 6 protein homolog OS=Homo sapiens GN=STRA6 PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.770e-21
Identity = 103/444 (23.20%), Postives = 194/444 (43.69%), Query Frame = 0 
Query:  204 ANDEDWKSEYMYLHVKNLL--KKVPKQNHSIPEHLEKKKAQIDEEKGFRNQIVKAQERFRNSLYQYKPEFKYSTRMMSSVLVTYIGMYQVTIFFAMYGYVVF--LLFDLLFDLDFIQKGAREIGLE-----ISIIEKYISAIGLSWWLGLITALVFSILVMSNSISWYRKHMLMLRKGDYSFLPRPLRKKKFNSASFMVASMKFAGFQVAYACWGFLVLAFLLFFAYWILITQIIFAIRDGRLTMLLQLMLSIWP---TIVIAIGVFLIQYVMATKLFL-FDKMTLQVDNRRVYHIISYSMFYFNIFLGLVSCLLRIIFGMLFGIIFLQRLQKSTLPRAAELIDPGYSAYLGYILLEHQHANPVIQCFTRLLMESVRKEINNEQSSDPQNYFGTTKRGLMPAGFLDTTD-MSDIKREIRRKKRILIRWHLYITLSLNPTLLKFR 633
            A  +  +S Y   +++NLL  KK+    H+              + GF   +  A+   R+ +Y  +P F    +++ S  +T   +YQV +   +        +   +  D+ ++  G   +  E     + +++ ++ A+ + +   L+ + + + LV+  S+  +R ++  L +G    L  PL +    S   +   M F+ +Q A+ C G LV   + F     L   ++  +  GR  +L + + S WP   T+ +A+   ++Q + A  +FL       Q+ NRRV +  ++ +F  N+ +G +    R++   L+  I L ++  S LP  A  +DPGY  Y  ++ +E   ++P +  F  LL+++         +       G    G+     L T D M+   R    + R   RW L  TL  NPTL  FR
Sbjct:  237 AGSKGLQSSYSEEYLRNLLCRKKLGSSYHT-------------SKHGF---LSWARVCLRHCIYTPQPGFHLPLKLVLSATLTGTAIYQVALLLLVGVVPTIQKVRAGVTTDVSYLLAGFGIVLSEDKQEVVELVKHHLWALEVCYISALVLSCLLTFLVLMRSLVTHRTNLRALHRGAALDL-SPLHRSPHPSRQAIFCWMSFSAYQTAFICLGLLVQQIIFFLGTTALAFLVLMPVLHGRNLLLFRSLESSWPFWLTLALAV---ILQNMAAHWVFLETHDGHPQLTNRRVLYAATFLLFPLNVLVGAMVATWRVLLSALYNAIHLGQMDLSLLPPRAATLDPGYYTYRNFLKIEVSQSHPAMTAFCSLLLQAQSLLPRTMAAPQDSLRPGEEDEGMQ---LLQTKDSMAKGARPGASRGR--ARWGLAYTLLHNPTLQVFR 655
The following BLAST results are available for this feature:
BLAST of TCONS_00008330-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
STRA61.770e-2123.20Stimulated by retinoic acid gene 6 protein homolog... [more]
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