TCONS_00008757-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00008757-protein
Unique NameTCONS_00008757-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length366

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00008757-protein ID=TCONS_00008757-protein|Name=TCONS_00008757-protein|organism=Clytia hemisphaerica|type=polypeptide|length=366bp
MEISKELLTGFPLRRHKLPTDPFFDDGNQIFSFHEKTVNSDIDFLVDSIS
AVHIEEFGCSVKGCRETFTDPMQYNRHYDMLHRYSCETCHRNFSSNHLLS
LHISESHDAFFKAQRDKGIAVFHCLIESCGRSFKAVETRRRHLVEKHKYP
PDFRFNMARRPHQKYQKNKKSNNTNSSNGNVLIEAESDVTMEMEYESKKT
KTKPKTQQQDSSGKATDIQMVDHAIGMCVESGEIDIGNRHSDSTGEGSNT
QNKKPKPKNKNRKQKGKGHKKLPKDEKITIDFPAVEDKVTTLSNEKPKEL
KTAHRIDDTSSKEPSSNLPMDKDVDSVPCKQELKEAGTTSFTMNTKMVPR
SVSFGRYRMTTKGLTK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_004909XLOC_004909Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00008757TCONS_00008757Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 57..82
e-value: 0.21
score: 20.7
coord: 84..107
e-value: 1.4
score: 18.0
coord: 122..147
e-value: 1.4
score: 17.9
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 86..107
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 124..147
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 84..107
score: 9.577
NoneNo IPR availableGENE3D3.30.160.60coord: 95..147
e-value: 0.033
score: 14.1
coord: 55..94
e-value: 0.0047
score: 16.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 235..326
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 154..219

Blast
[Close]
BLAST of TCONS_00008757-protein vs. Swiss-Prot (Human)
Match: ZN511 (Zinc finger protein 511 OS=Homo sapiens GN=ZNF511 PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 2.984e-21
Identity = 59/192 (30.73%), Postives = 84/192 (43.75%), Query Frame = 0 
Query:   23 FFDDGNQIFSFHEKTVNSDIDFLVDSISAVHIEEFGCSVKGCRETFTDPMQYNRHYDMLHRYSCETCHRNFSSNHLLSLHISESHDAFFKAQRDKGIAVFHCLIESCGRSFKAVETRRRHLVEKHKYPPDFRFNMARRPHQKYQKNKKSNNTNSSNGNVLIEAESDVTMEMEYESKKTKTKPKTQQQDSSGK 214
            FF+DG+     + + V   +    D      +  F C V GC + F     Y  HY  LH   C  C R F S HLL  HI E HD+ F+   ++   ++ CL+E C   FK    R+ H+V  H YP DFRF+          K KKS +  S+      EA  D     E E+ +  ++P       +G+
Sbjct:   49 FFEDGDVQRHLYLQDVIMQV---ADVPEKPRVPAFACQVAGCCQVFDALDDYEHHYHTLHGNVCSFCKRAFPSGHLLDAHILEWHDSLFQILSERQ-DMYQCLVEGCTEKFKTSRDRKDHMVRMHLYPADFRFD----------KPKKSRSPASA------EAPGDSGERSEGEAMEICSEPVAASPAPAGE 220
The following BLAST results are available for this feature:
BLAST of TCONS_00008757-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ZN5112.984e-2130.73Zinc finger protein 511 OS=Homo sapiens GN=ZNF511 ... [more]
back to top