TCONS_00008847-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00008847-protein
Unique NameTCONS_00008847-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length193

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00008847-protein ID=TCONS_00008847-protein|Name=TCONS_00008847-protein|organism=Clytia hemisphaerica|type=polypeptide|length=193bp
MASIKTTMKQQISNLVHGLIYKPGMSRLPWPFVVVAFCTELVFGMTRASA
YTYLPKLIKTFGVSETNTGKTMGYIGSSLVVGSFIASFGVGYLADRLNKK
HLLMSSLFLAAVGSLAFGVTQSIPFAIFVRFFQGIPGLLVVAQSLLLDQC
DTTNRSVAMAFVLAAFSVGMVLGPAIGGFLAFPDDIFNGIFKS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_004966XLOC_004966Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00008847TCONS_00008847Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011701MFS
IPR020846MFS_dom
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055085 transmembrane transport
cellular_component GO:0016021 integral component of membrane
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.1250.20coord: 21..186
e-value: 1.3E-27
score: 95.9
IPR011701Major facilitator superfamilyPFAMPF07690MFS_1coord: 37..181
e-value: 3.1E-19
score: 69.0
IPR020846Major facilitator superfamily domainPROSITEPS50850MFScoord: 32..193
score: 19.374
IPR020846Major facilitator superfamily domainCDDcd06174MFScoord: 33..181
e-value: 2.311E-12
score: 61.9461
IPR020846Major facilitator superfamily domainSUPERFAMILY103473MFS general substrate transportercoord: 21..181

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00008847-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top