TCONS_00008942-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00008942-protein
Unique NameTCONS_00008942-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length364

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00008942-protein ID=TCONS_00008942-protein|Name=TCONS_00008942-protein|organism=Clytia hemisphaerica|type=polypeptide|length=364bp
VNVKDSNNVTFQSIELQNTTVYEFAFFVRRSIFNAIEIRVVDCVMNSRLV
NVQDSNNVIIQSIELQNTTVYGFLAFLVWRSIFNANEIRMVDCVIKDCLI
FVEDSSNATIQNIEIQKTTVYGLPFFVSRSIFNANEIRVVDCVMKDRLVS
VQDTNNVIIQSIELQNTTVYEFAFFVGRSIFNANEIRVVDCVMKTRLVNV
VYSNNVTIQSIELQNTTVYGLAFFVSNSIFNANEMRIVDCVMKSHLVNVQ
DSNNVIIQSIELQNTTVYEFAFFVWRSIFNANDIRVVDSTLKGLVELTQK
SNITIKDISVNKTNVRETFARLWKFSKSTITNVTIYESRIIHAMFSLTEK
SNVILKNATISDTE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_005021XLOC_005021Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00008942TCONS_00008942Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012334Pectin_lyas_fold
IPR011050Pectin_lyase_fold/virulence
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012334Pectin lyase foldGENE3D2.160.20.10coord: 1..269
e-value: 3.9E-8
score: 32.1
IPR012334Pectin lyase foldGENE3D2.160.20.10coord: 272..364
e-value: 0.0024
score: 16.2
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 3..181

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00008942-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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