TCONS_00008948-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00008948-protein
Unique NameTCONS_00008948-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length611

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00008948-protein ID=TCONS_00008948-protein|Name=TCONS_00008948-protein|organism=Clytia hemisphaerica|type=polypeptide|length=611bp
MKHYISMIVLLLSLLGVNTKCTGDDCSPNWLPFDNMNSALKGYDIMTGNP
FSNGKDPGFRQQIFVPTLKNAEHRYELHSAFTYDNEVYCDTKMTTDISST
SKEYRKFMRETSKSGVDLQVGTETEVTAGIDIKGASISATKKIPEPFTRA
WGKSNDFQSMQGLFSEKKSLVATSFAKCQLYEVIIHTFSSIPPLMEPFKK
SIKELHQASGADKNTQLRIFKSFIRHYGTHFSIKTSFGGEIVHRTVFSSS
TKKKFDGEKIKKCEYVRGSKIFGIQVEQDKEGCSSTDEKRLYNEQGSTIV
SSIMSKGAPPEKDIYTWAQQDFKSVPLKYQLSPIINLFKKKYLDDGLQVS
AEGIRKWFVPLYFNFCVSMYGSECSERNGCGYDDQCPSDTDCVGGPTESH
YCRAWSSWSCQHCSKTAKRTRTCHGCSGKTTETKEMCQIESSCFPDKVLS
YNTGSWGSWRSWEYCPKGTWVVKLQTNIESYQGGDDDTALNAISLRCNND
VGTTIKSGYTNWGTWRAESQKCINGFYGGMLKDESYQGSDDDTSTNAIRL
ICRDNNQWYKSGEGGWGSWTQSTYCPAGYKIVGLQTQIESYQGSDDDTSL
NGVRLLCRYFG
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_005025XLOC_005025Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00008948TCONS_00008948Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020864MACPF
IPR005515VOMI
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020864Membrane attack complex component/perforin (MACPF) domainSMARTSM00457MACPF_8coord: 168..352
e-value: 0.0074
score: 13.7
IPR020864Membrane attack complex component/perforin (MACPF) domainPFAMPF01823MACPFcoord: 153..341
e-value: 2.3E-16
score: 60.4
IPR020864Membrane attack complex component/perforin (MACPF) domainPROSITEPS51412MACPF_2coord: 22..369
score: 12.085
IPR005515Vitelline membrane outer layer protein I (VOMI)PFAMPF03762VOMIcoord: 451..607
e-value: 9.0E-35
score: 120.2
IPR005515Vitelline membrane outer layer protein I (VOMI)GENE3D2.100.10.20coord: 444..609
e-value: 7.0E-40
score: 136.5
IPR005515Vitelline membrane outer layer protein I (VOMI)SUPERFAMILY51092Vitelline membrane outer protein-I (VMO-I)coord: 448..607

Blast
[Close]
BLAST of TCONS_00008948-protein vs. Swiss-Prot (Human)
Match: VMO1 (Vitelline membrane outer layer protein 1 homolog OS=Homo sapiens GN=VMO1 PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 4.020e-18
Identity = 61/163 (37.42%), Postives = 80/163 (49.08%), Query Frame = 0 
Query:  454 GSWGSWRSWEYCPKGTWVVKLQTNIESYQG-GDDDTALNAISLRC--NNDVGTT--IKSGYTNWGTWRAESQKCINGFY--GGMLKDESYQGSDDDTSTNAIRLICRDNNQWYKSGE--GGWGSWTQSTYCPAGYKIVGLQTQIESYQGSDDDTSLNGVRLLC 607
            G WG W   E CP G +       +E  QG   DDTALN I L C   N +G T  ++S   +WG W +E   C  G Y     L+ E+     D+T+ N +R  C D  +    G   G +G W  S +CP G    GLQT+I+  +G  DDT+LN  RL C
Sbjct:   42 GPWGDWAWPEMCPDGFFASGFSLKVEPPQGIPGDDTALNGIRLHCARGNVLGNTHVVESQSGSWGEW-SEPLWCRGGAYLVAFSLRVEAPTTLGDNTAANNVRFRCSDGEELQGPGLSWGDFGDW--SDHCPKG--ACGLQTKIQGPRGLGDDTALNDARLFC 199
The following BLAST results are available for this feature:
BLAST of TCONS_00008948-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
VMO14.020e-1837.42Vitelline membrane outer layer protein 1 homolog O... [more]
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