TCONS_00008984-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00008984-protein
Unique NameTCONS_00008984-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length540

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00008984-protein ID=TCONS_00008984-protein|Name=TCONS_00008984-protein|organism=Clytia hemisphaerica|type=polypeptide|length=540bp
MLRTTQSLSKLGKASKEALKAFTPACSRLSTSSSQCSTAEPDGEPEFLEM
VKDFADNAHSLALDKLLSAKPQPGKRAEEAAVREKHIRGILDIIKPTNTA
LSVTFPIRRDNGEIELVRGYRAQHSHHRLPTKGGIRYAMDVNMDEVQALA
MLMTFKCAVVDVPFGGAKGGIRINKGDYSENEVEKITRRFTVELARKGFI
GPGIDVPAPDMGTGEKEMAWMADTFAMTHGYGDINASGCVTGKPISQGGI
HGRTAATGRGVYHGIDNFIKDEYYASLVGLTPGLEGKNFIVQGFGNVGLH
TCRYLHRFGAKCIGVIEWDGSIYNADGIDPKDLEDYKLENGTIRGFPGAQ
DTTEDLMIAECDILIPAANERQITKKNAHLIQAKIIAEGANGPTTPAADK
ILQERKRLVIPDLYINAGGVTVSYFEWLKNLNHVSYGRLTWKYEEESNLN
LLDSVQQSLQTKFNDDIPITASPAFQDKIKGASEKDIVHSGLAFTMERSA
KRIMATAQAYELGLDVRSAAYVVALEKIYNTYSEAGLTFS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_005031XLOC_005031Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00008984TCONS_00008984Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006095Glu/Leu/Phe/Val_DH
IPR006096Glu/Leu/Phe/Val_DH_C
IPR006097Glu/Leu/Phe/Val_DH_dimer_dom
IPR014362Glu_DH
IPR033922NAD_bind_Glu_DH
IPR016040NAD(P)-bd_dom
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO:0006520cellular amino acid metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
GO:0016639oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor
GO:0004352glutamate dehydrogenase (NAD+) activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006520 cellular amino acid metabolic process
biological_process GO:0055114 oxidation-reduction process
molecular_function GO:0004352 glutamate dehydrogenase (NAD+) activity
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0016639 oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006095Glutamate/phenylalanine/leucine/valine dehydrogenasePRINTSPR00082GLFDHDRGNASEcoord: 415..426
score: 70.71
coord: 289..309
score: 43.4
coord: 239..261
score: 54.35
coord: 154..168
score: 57.43
IPR006096Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminalSMARTSM00839ELFV_dehydrog_3coord: 250..536
e-value: 1.7E-82
score: 290.1
IPR006096Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminalPFAMPF00208ELFV_dehydrogcoord: 248..436
e-value: 2.4E-49
score: 168.2
NoneNo IPR availableGENE3D1.10.287.140coord: 41..98
e-value: 9.5E-11
score: 41.2
NoneNo IPR availableGENE3D3.40.50.720coord: 248..539
e-value: 2.9E-96
score: 321.7
NoneNo IPR availableGENE3D3.40.50.10860coord: 99..247
e-value: 4.7E-59
score: 197.7
NoneNo IPR availableSUPERFAMILY53223Aminoacid dehydrogenase-like, N-terminal domaincoord: 41..250
IPR006097Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domainPFAMPF02812ELFV_dehydrog_Ncoord: 99..227
e-value: 3.9E-59
score: 198.1
IPR014362Glutamate dehydrogenasePIRSFPIRSF000185Glu_DHcoord: 59..539
e-value: 8.8E-149
score: 493.6
IPR033922NAD(P) binding domain of glutamate dehydrogenaseCDDcd01076NAD_bind_1_Glu_DHcoord: 248..530
e-value: 1.77551E-105
score: 317.17
IPR016040NAD(P)-binding domainSUPERFAMILY51735NAD(P)-binding Rossmann-fold domainscoord: 251..538

Blast
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BLAST of TCONS_00008984-protein vs. Swiss-Prot (Human)
Match: DHE3 (Glutamate dehydrogenase 1, mitochondrial OS=Homo sapiens GN=GLUD1 PE=1 SV=2)

HSP 1 Score: 692.189 bits (1785), Expect = 0.000e+0
Identity = 334/540 (61.85%), Postives = 418/540 (77.41%), Query Frame = 0 
Query:    4 TTQSLSKLGKASKEALKAFTPACSRLSTSSSQCSTAEPDGEPEFLEMVKDFADNAHSLALDKLLSAKPQPGKRAEEAAVREKHIRGILDIIKPTNTALSVTFPIRRDNGEIELVRGYRAQHSHHRLPTKGGIRYAMDVNMDEVQALAMLMTFKCAVVDVPFGGAKGGIRINKGDYSENEVEKITRRFTVELARKGFIGPGIDVPAPDMGTGEKEMAWMADTFAMTHGYGDINASGCVTGKPISQGGIHGRTAATGRGVYHGIDNFIKDEYYASLVGLTPGLEGKNFIVQGFGNVGLHTCRYLHRFGAKCIGVIEWDGSIYNADGIDPKDLEDYKLENGTIRGFPGAQDTTEDLMIAECDILIPAANERQITKKNAHLIQAKIIAEGANGPTTPAADKILQERKRLVIPDLYINAGGVTVSYFEWLKNLNHVSYGRLTWKYEEESNLNLLDSVQQSLQTKFNDD---IPITASPAFQDKIKGASEKDIVHSGLAFTMERSAKRIMATAQAYELGLDVRSAAYVVALEKIYNTYSEAGLTFS 540
            +  S + LG A  +   A  P  +  +      + A+ + +P F +MV+ F D   S+  DKL+    +  +  E    +   +RGIL IIKP N  LS++FPIRRD+G  E++ GYRAQHS HR P KGGIRY+ DV++DEV+ALA LMT+KCAVVDVPFGGAK G++IN  +Y++NE+EKITRRFT+ELA+KGFIGPGIDVPAPDM TGE+EM+W+ADT+A T G+ DINA  CVTGKPISQGGIHGR +ATGRGV+HGI+NFI +  Y S++G+TPG   K F+VQGFGNVGLH+ RYLHRFGAKCI V E DGSI+N DGIDPK+LED+KL++G+I GFP A+     ++ A+CDILIPAA+E+Q+TK NA  ++AKIIAEGANGPTTP ADKI  ER  +VIPDLY+NAGGVTVSYFEWLKNLNHVSYGRLT+KYE +SN +LL SVQ+SL+ KF      IPI  +  FQD+I GASEKDIVHSGLA+TMERSA++IM TA  Y LGLD+R+AAYV A+EK++  Y+EAG+TF+
Sbjct:   23 SADSAALLGWARGQPAAAPQPGLALAARRHYSEAVADREDDPNFFKMVEGFFDRGASIVEDKLV----EDLRTRESEEQKRNRVRGILRIIKPCNHVLSLSFPIRRDDGSWEVIEGYRAQHSQHRTPCKGGIRYSTDVSVDEVKALASLMTYKCAVVDVPFGGAKAGVKINPKNYTDNELEKITRRFTMELAKKGFIGPGIDVPAPDMSTGEREMSWIADTYASTIGHYDINAHACVTGKPISQGGIHGRISATGRGVFHGIENFINEASYMSILGMTPGFGDKTFVVQGFGNVGLHSMRYLHRFGAKCIAVGESDGSIWNPDGIDPKELEDFKLQHGSILGFPKAKPYEGSILEADCDILIPAASEKQLTKSNAPRVKAKIIAEGANGPTTPEADKIFLERNIMVIPDLYLNAGGVTVSYFEWLKNLNHVSYGRLTFKYERDSNYHLLMSVQESLERKFGKHGGTIPIVPTAEFQDRISGASEKDIVHSGLAYTMERSARQIMRTAMKYNLGLDLRTAAYVNAIEKVFKVYNEAGVTFT 558
The following BLAST results are available for this feature:
BLAST of TCONS_00008984-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DHE30.000e+061.85Glutamate dehydrogenase 1, mitochondrial OS=Homo s... [more]
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