TCONS_00009289-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00009289-protein
Unique NameTCONS_00009289-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length181

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00009289-protein ID=TCONS_00009289-protein|Name=TCONS_00009289-protein|organism=Clytia hemisphaerica|type=polypeptide|length=181bp
MPRLLAMVHKKRHTPLPALIFTCVIAWIMLIPESSNFSTLVNYFNFAAWT
FYGATVAALLWLRYKEPDLERPYRVFIGVPILVLLCSVYLVVAPFYDYPL
ESFYCLLFILLGIPVYFIFVHFKLFPNKVYDGFDAMTDFIERKCNLSMPG
VDQKDEVDEIDKQKKEQQLAMQPLKTSTDQI
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_005195XLOC_005195Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00009289TCONS_00009289Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002293AA/rel_permease1
Vocabulary: Molecular Function
TermDefinition
GO:0015171amino acid transmembrane transporter activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0003333amino acid transmembrane transport
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0003333 amino acid transmembrane transport
cellular_component GO:0016020 membrane
molecular_function GO:0015171 amino acid transmembrane transporter activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002293Amino acid/polyamine transporter IPFAMPF13520AA_permease_2coord: 1..97
e-value: 9.3E-14
score: 51.0

Blast
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BLAST of TCONS_00009289-protein vs. Swiss-Prot (Human)
Match: LAT2 (Large neutral amino acids transporter small subunit 2 OS=Homo sapiens GN=SLC7A8 PE=1 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 1.656e-31
Identity = 65/182 (35.71%), Postives = 107/182 (58.79%), Query Frame = 0 
Query:    1 MPRLLAMVHKKRHTPLPALIFTCVIAWIMLIPESSNFSTLVNYFNFAAWTFYGATVAALLWLRYKEPDLERPYRVFIGVPILVLLCSVYLVVAPFYDYPLESFYCLLFILLGIPVYFIFVHFKLFPNKVYDGFDAMTDFIERKCNLSMPGVDQKDEVDEIDKQKKEQQLAM-QPLKTSTDQI 181
            +P +LAM+H KR TP+PAL+FTC+   +ML+  +S+  TL+NY  F  + FYG TVA  + LR+K+PD+ RP ++ +  PI+ LL   +L+V   +  P+     L  +L G+PVYF+ V+++  P    D  + +T   ++ C +  P V++    +E ++  +EQQ  M QP  T    +
Sbjct:  350 LPSVLAMIHVKRCTPIPALLFTCISTLLMLV--TSDMYTLINYVGFINYLFYGVTVAGQIVLRWKKPDIPRPIKINLLFPIIYLLFWAFLLVFSLWSEPVVCGIGLAIMLTGVPVYFLGVYWQHKPKCFSDFIELLTLVSQKMCVVVYPEVERGSGTEEANEDMEEQQQPMYQPTPTKDKDV 529
The following BLAST results are available for this feature:
BLAST of TCONS_00009289-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
LAT21.656e-3135.71Large neutral amino acids transporter small subuni... [more]
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