TCONS_00009865-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00009865-protein
Unique NameTCONS_00009865-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length379

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00009865-protein ID=TCONS_00009865-protein|Name=TCONS_00009865-protein|organism=Clytia hemisphaerica|type=polypeptide|length=379bp
MVKTKASMALLLQLLPLLVLYITFSTGQLLTQQYQSTCSPDDFYLKRYPK
LGFHAFEPVTKYGNNITREQDCFKYCRKHNCTIIFVWSRATGLKCILYHT
LNVDIFTASGRITAHQNHIAFYARTSCSPVHPNKQLVPVIYEKAASCSDI
IEAGGSYRSGIYQVGNAYRPINDRYKFILCDMEESGGGWTVIQNNEPMDG
RSLWTSFLRYGNGFGNLRNVFWAGNKYIHDWTKNNDTELLIKLVADNGDT
YKAFFRTFYIGNETEGYPLTIGEYSVADSTLAGDSDLIQSSFAFHNGQRF
STPIEDVEDDERCARESQGGWWFGTYPNCTRVFLNAKHETDICLDPLNAY
KAIYWTHTTPTCYTKSTMMIRRRLKAIDI
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_005520XLOC_005520Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00009865TCONS_00009865Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002181Fibrinogen_a/b/g_C_dom
IPR014716Fibrinogen_a/b/g_C_1
IPR014715Fibrinogen_a/b/g_C_2
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainSMARTSM00186FBG_2coord: 142..373
e-value: 6.3E-21
score: 85.5
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainPFAMPF00147Fibrinogen_Ccoord: 146..371
e-value: 2.3E-34
score: 119.0
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainPROSITEPS51406FIBRINOGEN_C_2coord: 138..374
score: 25.708
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainSUPERFAMILY56496Fibrinogen C-terminal domain-likecoord: 142..371
IPR014716Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1GENE3D3.90.215.10coord: 70..300
e-value: 6.5E-33
score: 113.8
IPR014715Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 2GENE3D4.10.530.10coord: 301..365
e-value: 8.7E-11
score: 41.3

Blast
[Close]
BLAST of TCONS_00009865-protein vs. Swiss-Prot (Human)
Match: FCN2 (Ficolin-2 OS=Homo sapiens GN=FCN2 PE=1 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 3.339e-20
Identity = 70/196 (35.71%), Postives = 98/196 (50.00%), Query Frame = 0 
Query:  146 SCSDIIEAGGSYRSGIYQVGNAYRPINDRYKFILCDMEESGGGWTVIQNNEPMDGR-SLWTSFLRYGNGFGNLRNVFWAGNKYIHDWTKNNDTELLIKLVADNGDTYK-AFFRTFYIGNETEGYPLTIGEYSVADSTLAGDSDLIQSSFAFHNGQRFSTPIEDVE-DDERCARESQGGWWFGTYPNCTRVFLNAKH 338
            +C D+++ G  + SG + +   Y P + R   +LCDM+  GGGWTV Q    +DG    +  +  Y  GFG+    FW GN  IH  T    +EL + LV D  D Y+ A +R+F + +E E Y L +G +       AGD      S  FHN Q FST  +D + +   CA   QG WW   Y NC    LN ++
Sbjct:  104 TCKDLLDRG-HFLSGWHTI---YLP-DCRPLTVLCDMDTDGGGWTVFQRR--VDGSVDFYRDWATYKQGFGSRLGEFWLGNDNIHALTAQGTSELRVDLV-DFEDNYQFAKYRSFKVADEAEKYNLVLGAFVEGS---AGD------SLTFHNNQSFSTKDQDNDLNTGNCAVMFQGAWW---YKNCHVSNLNGRY 279
The following BLAST results are available for this feature:
BLAST of TCONS_00009865-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FCN23.339e-2035.71Ficolin-2 OS=Homo sapiens GN=FCN2 PE=1 SV=2[more]
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