TCONS_00009998-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00009998-protein
Unique NameTCONS_00009998-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length347

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00009998-protein ID=TCONS_00009998-protein|Name=TCONS_00009998-protein|organism=Clytia hemisphaerica|type=polypeptide|length=347bp
STLGDIGKVSIFLLKLPSCQTLPMLGSCFVNGIVSPSISRANSVTFCSNA
DGGSSLLFGRFTGNDFIDIFCHRNSTGGMTLFNMNSIQVLSIARTFCEGG
WRLMTADLNGDSNQDLVCLRADGSVSYLLNTDGGTFLTAAEQNINASFTC
NKTLIFGDINGDNKDDIVCQNEDGIIHFALTNSSNLATGLFTSQQTFPTS
WCNGTMDQIMKGDLNGDGKIDLLCHAERTYLRSALISSGASFEEELFEME
LEVCGDENQFLLVRDINGDGYADLVCKSSDLTGTTKIIHNKPGEYFTDQS
VRNEFRFCVNGGPTNFYVEDVNRDGFDDLVCQTSIAKRYIFISRCYF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_005609XLOC_005609Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00009998TCONS_00009998Clytia hemisphaericatranscript
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13517VCBScoord: 107..169
e-value: 4.1E-11
score: 43.2
coord: 265..331
e-value: 7.0E-8
score: 32.8
NoneNo IPR availableGENE3D2.130.10.130coord: 42..222
e-value: 1.0E-18
score: 67.0
NoneNo IPR availableGENE3D2.130.10.130coord: 223..344
e-value: 3.4E-11
score: 42.3
NoneNo IPR availableSUPERFAMILY69318Integrin alpha N-terminal domaincoord: 42..331

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00009998-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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